C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000473_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146205-ENSG00000115677 CGP 9606 2:241188509-241317061
GeneTranscriptPositionBiotype
ENSG00000115677 (HDLBP)
high density lipoprotein binding protein 		ENST00000310931 (HDLBP-003) 241229212-241315842 protein_coding
ENST00000373292 (HDLBP-004) 241229224-241262792 protein_coding
ENST00000391975 (HDLBP-001) 241227264-241272886 protein_coding
ENST00000391976 (HDLBP-002) 241229212-241315292 protein_coding
ENST00000413241 (HDLBP-012) 241262916-241315672 protein_coding
ENST00000417540 (HDLBP-009) 241266827-241315702 protein_coding
ENST00000420451 (HDLBP-016) 241264475-241315702 protein_coding
ENST00000422080 (HDLBP-029) 241264521-241272833 protein_coding
ENST00000422933 (HDLBP-031) 241256383-241268694 protein_coding
ENST00000423693 (HDLBP-013) 241262917-241315672 protein_coding
ENST00000425989 (HDLBP-006) 241262924-241317061 protein_coding
ENST00000426343 (HDLBP-024) 241262871-241272831 protein_coding
ENST00000427007 (HDLBP-028) 241266812-241272812 protein_coding
ENST00000427183 (HDLBP-201) 241227267-241272831 protein_coding
ENST00000427487 (HDLBP-044) 241238679-241246864 protein_coding
ENST00000428482 (HDLBP-015) 241256394-241315675 protein_coding
ENST00000430918 (HDLBP-019) 241262736-241302724 protein_coding
ENST00000441124 (HDLBP-011) 241262782-241315203 protein_coding
ENST00000442714 (HDLBP-020) 241256714-241273117 protein_coding
ENST00000442730 (HDLBP-062) 241229462-241230824 protein_coding
ENST00000444092 (HDLBP-025) 241262720-241271971 protein_coding
ENST00000449504 (HDLBP-022) 241266818-241272834 protein_coding
ENST00000449864 (HDLBP-021) 241264449-241272863 protein_coding
ENST00000452065 (HDLBP-027) 241256765-241272820 protein_coding
ENST00000452931 (HDLBP-042) 241240018-241249396 protein_coding
ENST00000453141 (HDLBP-033) 241252965-241262862 protein_coding
ENST00000458564 (HDLBP-030) 241264542-241272813 protein_coding
ENST00000459788 (HDLBP-046) 241239811-241242790 retained_intron
ENST00000460826 (HDLBP-057) 241246570-241248043 retained_intron
ENST00000462130 (HDLBP-008) 241266866-241315726 processed_transcript
ENST00000467435 (HDLBP-037) 241253000-241255548 retained_intron
ENST00000470482 (HDLBP-052) 241230775-241236664 processed_transcript
ENST00000470710 (HDLBP-034) 241255328-241256708 retained_intron
ENST00000471294 (HDLBP-045) 241239992-241243688 processed_transcript
ENST00000476807 (HDLBP-040) 241248249-241250996 processed_transcript
ENST00000477477 (HDLBP-038) 241248329-241255445 processed_transcript
ENST00000479169 (HDLBP-047) 241238293-241242540 retained_intron
ENST00000479894 (HDLBP-050) 241235185-241236771 retained_intron
ENST00000483086 (HDLBP-049) 241235205-241239736 processed_transcript
ENST00000484412 (HDLBP-055) 241229439-241230848 processed_transcript
ENST00000487169 (HDLBP-005) 241229224-241250937 retained_intron
ENST00000488013 (HDLBP-053) 241230204-241231343 retained_intron
ENST00000488923 (HDLBP-043) 241246664-241247417 retained_intron
ENST00000490697 (HDLBP-023) 241268499-241272831 processed_transcript
ENST00000494862 (HDLBP-063) 241229483-241229983 retained_intron
ENST00000496569 (HDLBP-007) 241269173-241315820 processed_transcript
ENST00000498595 (HDLBP-039) 241248244-241255400 retained_intron
ENSG00000146205 (ANO7)
anoctamin 7 		ENST00000274979 (ANO7-001) 241188509-241225376 protein_coding
ENST00000402430 (ANO7-010) 241188612-241223357 protein_coding
ENST00000402530 (ANO7-002) 241188509-241196168 protein_coding
ENST00000451047 (ANO7-008) 241217615-241223705 protein_coding
ENST00000459928 (ANO7-005) 241218294-241225377 retained_intron
ENST00000471606 (ANO7-007) 241212148-241212876 retained_intron
ENST00000475532 (ANO7-006) 241199097-241200178 retained_intron
ENST00000481071 (ANO7-004) 241218273-241225245 retained_intron
ENST00000487192 (ANO7-003) 241218185-241225184 retained_intron
ENSG00000266621 (AC104841.1)
 ENST00000578965 (AC104841.1-201) 241245202-241245299 miRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_000473_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034107-ENSMUSG00000034088 CGP 10090 1:93373930-93478815
GeneTranscriptPositionBiotype
ENSMUSG00000034088 (Hdlbp)
high density lipoprotein (HDL) binding protein 		ENSMUST00000042498 (Hdlbp-003) 93407762-93445686 protein_coding
ENSMUST00000170883 (Hdlbp-001) 93405940-93478801 protein_coding
ENSMUST00000185349 (Hdlbp-009) 93440298-93445649 retained_intron
ENSMUST00000186164 (Hdlbp-004) 93408002-93440792 protein_coding
ENSMUST00000186787 (Hdlbp-008) 93437119-93445432 protein_coding
ENSMUST00000188165 (Hdlbp-005) 93440688-93478377 protein_coding
ENSMUST00000188844 (Hdlbp-011) 93475173-93478380 retained_intron
ENSMUST00000188988 (Hdlbp-010) 93431435-93440961 protein_coding
ENSMUST00000189025 (Hdlbp-006) 93437155-93478815 protein_coding
ENSMUST00000189951 (Hdlbp-002) 93428569-93445652 retained_intron
ENSMUST00000190321 (Hdlbp-007) 93431018-93445682 protein_coding
ENSMUSG00000034107 (Ano7)
anoctamin 7 		ENSMUST00000058682 (Ano7-002) 93373930-93403402 protein_coding
ENSMUST00000186641 (Ano7-001) 93373930-93404303 protein_coding
ENSMUST00000190340 (Ano7-003) 93401861-93403570 protein_coding
ENSMUSG00000090489 (Gm17415)
predicted gene, 17415 		ENSMUST00000096427 (Gm17415-001) 93421700-93422488 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000473_0001ENSG00000115677ENST00000310931ENST00000373292ENST00000391975ENST00000391976ENST00000470482ENST00000488923ENSG00000146205ENST00000274979ENST00000402430ENST00000451047ENST00000459928ENST00000471606ENST00000481071ENST00000487192ENSG00000266621ENST00000578965CIL_000473_0002ENSMUSG00000034088ENSMUST00000042498ENSMUST00000170883ENSMUST00000186164ENSMUST00000190321ENSMUSG00000034107ENSMUST00000058682ENSMUST00000186641ENSMUST00000190340ENSMUSG00000090489ENSMUST00000096427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115677 ENST00000310931 N/A N/A N/A N/A N/A 12.627±0.00 10.510±0.00 15.797±0.00 N/A 12.084±0.00 35.689±13.51 48.472±5.52 69.635±0.00 91.521±12.45
ENST00000373292 N/A N/A 16.721±0.00 12.234±0.00 23.326±0.00 45.312±21.84 20.102±8.82 32.163±0.00 19.405±0.00 20.994±0.00 47.131±32.03 N/A N/A 80.744±0.00
ENST00000391975 N/A N/A N/A 15.030±8.30 N/A N/A 14.953±0.00 N/A N/A N/A 18.896±11.81 31.851±6.29 N/A 42.417±0.00
ENST00000391976 86.594±0.00 44.582±0.00 15.940±0.00 9.885±0.00 60.760±38.16 38.651±18.50 35.900±20.76 36.562±18.91 32.593±14.64 52.214±37.16 38.671±25.13 64.381±28.87 105.437±3.75 N/A
ENST00000413241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 364.220±0.00 457.578±0.00 518.529±0.00
ENST00000470710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488923 N/A N/A 93.409±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146205 ENST00000274979 N/A N/A N/A N/A 0.036±0.00 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A 0.129±0.00
ENST00000402430 N/A N/A N/A N/A N/A 1.648±0.00 N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A
ENST00000402530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.231±0.00 0.667±0.00
ENST00000459928 N/A N/A N/A N/A 0.080±0.00 N/A 0.163±0.00 N/A N/A 0.165±0.00 N/A 0.580±0.00 0.217±0.00 0.297±0.00
ENST00000471606 N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481071 N/A N/A N/A 0.107±0.03 N/A 0.737±0.00 0.150±0.00 0.354±0.00 0.258±0.00 N/A N/A 1.310±1.27 0.294±0.00 N/A
ENST00000487192 0.277±0.00 N/A 0.179±0.00 0.193±0.00 0.058±0.00 N/A N/A N/A N/A 0.099±0.00 0.268±0.00 1.592±1.10 0.352±0.08 0.260±0.09
ENSG00000266621 ENST00000578965 0.272±0.00 6.055±0.00 N/A 0.945±0.00 704.542±0.00 N/A 0.580±0.00 1.837±0.00 N/A 1.948±0.00 N/A N/A N/A 1.331±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034088 ENSMUST00000042498 30.104±5.05 18.670±1.90 35.502±5.45 N/A 21.745±4.10 35.694±9.16 17.588±3.81 18.193±8.89 26.939±8.37 15.229±2.40 17.186±2.17 30.747±9.56 77.603±20.81 52.548±0.00
ENSMUST00000170883 13.007±3.96 N/A 34.908±16.47 22.304±3.97 9.816±9.36 10.194±0.00 32.436±7.31 13.848±3.13 18.723±7.56 6.684±1.50 37.568±1.61 21.385±21.36 39.794±11.68 51.537±14.81
ENSMUST00000185349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186164 N/A N/A N/A 18.777±0.00 N/A N/A N/A N/A N/A N/A N/A 41.286±9.55 45.276±18.65 N/A
ENSMUST00000186787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 242.921±0.00 447.193±138.34 253.963±0.00
ENSMUSG00000034107 ENSMUST00000058682 N/A 0.050±0.02 N/A N/A N/A 12.523±1.18 N/A N/A 0.013±0.00 0.020±0.00 N/A 0.103±0.04 N/A N/A
ENSMUST00000186641 N/A 0.022±0.00 0.119±0.00 0.020±0.00 0.061±0.03 23.673±3.25 0.015±0.00 0.020±0.01 0.019±0.01 0.044±0.02 N/A 0.090±0.04 0.055±0.02 0.063±0.07
ENSMUST00000190340 0.152±0.10 0.151±0.07 0.254±0.00 0.168±0.00 0.456±0.25 N/A 0.022±0.00 0.192±0.00 0.088±0.07 0.161±0.04 0.045±0.00 0.411±0.26 0.186±0.04 0.159±0.04
ENSMUSG00000090489 ENSMUST00000096427 0.920±0.34 0.846±0.32 0.254±0.13 0.237±0.04 0.473±0.26 0.706±0.35 0.210±0.10 0.306±0.07 0.489±0.36 0.396±0.02 0.148±0.09 0.781±0.43 0.380±0.14 0.749±0.19

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