C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000478_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078044-ENSDARG00000045033 CGP 7955 12:43009019-43191180
GeneTranscriptPositionBiotype
ENSDARG00000045033 (bnip3)
BCL2/adenovirus E1B interacting protein 3 		ENSDART00000125205 (bnip3-201) 43175668-43191180 protein_coding
ENSDARG00000078044 (ppp2r2d)
protein phosphatase 2, regulatory subunit B, delta 		ENSDART00000014124 (ppp2r2d-201) 43009019-43166389 protein_coding
ENSDART00000114401 (ppp2r2d-202) 43009136-43170897 protein_coding
ENSDART00000132470 (ppp2r2d-001) 43129661-43163458 protein_coding
ENSDART00000154293 (ppp2r2d-002) 43129757-43150364 protein_coding
CIL_000478_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175470-ENSG00000176171 CGP 9606 10:131900644-131981931
GeneTranscriptPositionBiotype
ENSG00000175470 (PPP2R2D)
protein phosphatase 2, regulatory subunit B, delta 		ENST00000422256 (PPP2R2D-201) 131900644-131956547 protein_coding
ENST00000455566 (PPP2R2D-001) 131900644-131959834 protein_coding
ENST00000470416 (PPP2R2D-007) 131901291-131959827 nonsense_mediated_decay
ENST00000472664 (PPP2R2D-004) 131940607-131945925 retained_intron
ENST00000482010 (PPP2R2D-005) 131901266-131956555 nonsense_mediated_decay
ENST00000490777 (PPP2R2D-003) 131940159-131956242 retained_intron
ENST00000517472 (PPP2R2D-006) 131939776-131944006 retained_intron
ENST00000616467 (PPP2R2D-002) 131901031-131956555 nonsense_mediated_decay
ENSG00000176171 (BNIP3)
BCL2/adenovirus E1B 19kDa interacting protein 3 		ENST00000368636 (BNIP3-001) 131966455-131981931 protein_coding
ENST00000540159 (BNIP3-002) 131968228-131981923 protein_coding
ENSG00000273521 (RP11-45A17.4)
 ENST00000617191 (RP11-45A17.4-001) 131980240-131981337 antisense
ENSG00000277959 (RP11-45A17.2)
 ENST00000614406 (RP11-45A17.2-001) 131971202-131971533 antisense
CIL_000478_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041769-ENSMUSG00000078566 CGP 10090 7:138846079-138909519
GeneTranscriptPositionBiotype
ENSMUSG00000041769 (Ppp2r2d)
protein phosphatase 2, regulatory subunit B, delta 		ENSMUST00000041097 (Ppp2r2d-001) 138846359-138883057 protein_coding
ENSMUST00000128157 (Ppp2r2d-002) 138846079-138871702 retained_intron
ENSMUST00000136824 (Ppp2r2d-007) 138846620-138876568 nonsense_mediated_decay
ENSMUST00000140047 (Ppp2r2d-006) 138846860-138869802 processed_transcript
ENSMUST00000148453 (Ppp2r2d-004) 138846386-138869784 nonsense_mediated_decay
ENSMUST00000152104 (Ppp2r2d-005) 138846587-138869827 processed_transcript
ENSMUST00000155672 (Ppp2r2d-003) 138846595-138883054 protein_coding
ENSMUST00000172764 (Ppp2r2d-009) 138868410-138876562 nonsense_mediated_decay
ENSMUST00000174090 (Ppp2r2d-008) 138860837-138874270 protein_coding
ENSMUSG00000041775 (Mapk1ip1)
mitogen-activated protein kinase 1 interacting protein 1 		ENSMUST00000075667 (Mapk1ip1-002) 138835833-138846260 protein_coding
ENSMUST00000118810 (Mapk1ip1-003) 138835878-138846257 protein_coding
ENSMUST00000119664 (Mapk1ip1-001) 138835823-138846273 protein_coding
ENSMUSG00000078566 (Bnip3)
BCL2/adenovirus E1B interacting protein 3 		ENSMUST00000106112 (Bnip3-001) 138890836-138909506 protein_coding
ENSMUST00000125359 (Bnip3-002) 138898710-138909479 processed_transcript
ENSMUST00000130500 (Bnip3-004) 138894281-138909495 processed_transcript
ENSMUST00000141223 (Bnip3-005) 138894610-138898276 processed_transcript
ENSMUST00000148970 (Bnip3-003) 138898540-138909519 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000478_0001ENSDARG00000045033ENSDART00000125205ENSDARG00000078044ENSDART00000014124ENSDART00000114401ENSDART00000132470ENSDART00000154293CIL_000478_0002ENSG00000175470ENST00000422256ENST00000455566ENST00000470416ENST00000472664ENST00000482010ENST00000490777ENST00000517472ENST00000616467ENSG00000176171ENST00000368636ENST00000540159ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406CIL_000478_0003ENSMUSG00000041769ENSMUST00000041097ENSMUST00000128157ENSMUST00000136824ENSMUST00000140047ENSMUST00000148453ENSMUST00000152104ENSMUST00000155672ENSMUST00000172764ENSMUST00000174090ENSMUSG00000041775ENSMUST00000075667ENSMUST00000118810ENSMUST00000119664ENSMUSG00000078566ENSMUST00000106112ENSMUST00000125359ENSMUST00000130500ENSMUST00000141223ENSMUST00000148970
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000478_0001ENSDARG00000045033ENSDART00000125205ENSDARG00000078044ENSDART00000014124ENSDART00000114401ENSDART00000132470CIL_000478_0002ENSG00000175470ENST00000422256ENST00000455566ENST00000470416ENST00000482010ENST00000490777ENST00000616467ENSG00000176171ENST00000368636ENST00000540159ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406CIL_000478_0003ENSMUSG00000041769ENSMUST00000041097ENSMUST00000155672ENSMUST00000174090ENSMUSG00000041775ENSMUST00000075667ENSMUST00000118810ENSMUST00000119664ENSMUSG00000078566ENSMUST00000106112ENSMUST00000130500ENSMUST00000148970
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045033 ENSDART00000125205 N/A N/A N/A 75.050±5.46 N/A N/A 29.991±6.10 3.310±1.05 0.752±0.00 N/A 25.050±0.00 N/A N/A N/A
ENSDARG00000078044 ENSDART00000014124 N/A N/A N/A 9.171±0.00 N/A N/A 2.880±0.00 6.721±0.00 0.558±0.00 N/A 0.479±0.00 N/A N/A N/A
ENSDART00000114401 N/A N/A N/A 6.945±3.03 N/A N/A 1.270±0.43 1.383±0.38 0.117±0.00 N/A 0.669±0.00 N/A N/A N/A
ENSDART00000132470 N/A N/A N/A N/A N/A N/A 1.304±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175470 ENST00000422256 3.582±0.00 4.205±0.00 0.777±0.00 4.956±1.42 4.789±0.00 2.724±1.62 4.675±3.02 4.058±3.20 2.248±0.11 1.788±0.77 5.083±2.18 7.191±5.72 6.153±2.16 4.171±2.22
ENST00000455566 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.798±0.00 N/A 1.869±0.00 N/A N/A
ENST00000470416 0.413±0.00 0.765±0.00 N/A 0.800±0.00 0.364±0.00 N/A 0.563±0.00 N/A 0.201±0.00 N/A N/A N/A N/A N/A
ENST00000472664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482010 2.280±0.00 2.090±0.00 1.217±0.00 3.076±0.00 2.919±0.00 N/A N/A 2.194±0.20 1.175±0.00 5.081±0.00 8.792±0.00 3.707±0.41 1.985±0.58 3.552±1.61
ENST00000490777 1.988±0.00 2.574±0.00 N/A 4.762±0.00 4.237±0.00 5.131±0.00 2.663±0.00 3.403±1.93 1.853±0.00 4.000±0.00 N/A 8.909±2.57 6.260±1.59 6.800±1.68
ENST00000517472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616467 1.401±0.00 1.466±0.00 N/A 4.559±0.00 1.583±0.29 2.620±1.40 3.183±0.00 1.774±0.39 1.144±0.00 N/A 0.929±0.00 2.265±0.00 2.607±0.16 3.640±0.37
ENSG00000176171 ENST00000368636 7.373±0.00 2.244±0.00 1.854±0.00 22.699±6.27 7.694±5.54 6.596±5.33 15.668±12.57 12.851±0.38 11.472±9.27 2.290±0.19 22.141±17.16 4.369±3.50 8.446±1.67 7.395±3.91
ENST00000540159 N/A 1.343±0.00 1.293±0.00 N/A 0.527±0.00 1.597±1.29 N/A N/A 0.972±0.00 1.197±0.00 N/A 1.102±0.54 8.111±0.00 6.294±0.00
ENSG00000273521 ENST00000617191 N/A N/A N/A 0.144±0.00 0.254±0.00 N/A 0.216±0.00 N/A N/A 0.269±0.15 0.287±0.00 0.144±0.08 0.052±0.00 0.045±0.03
ENSG00000277959 ENST00000614406 0.508±0.00 1.634±0.00 N/A N/A 0.389±0.00 0.281±0.00 N/A N/A N/A 0.424±0.33 N/A 1.548±0.61 0.331±0.14 0.885±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041769 ENSMUST00000041097 16.232±2.74 22.050±8.03 N/A 14.092±0.00 10.446±2.07 17.884±3.07 10.253±1.04 11.192±5.44 4.312±1.13 10.747±0.00 N/A 28.664±5.80 5.848±1.00 28.745±3.92
ENSMUST00000128157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155672 11.750±0.00 21.679±2.38 14.137±0.68 21.480±9.44 22.142±0.00 N/A N/A 7.240±2.57 8.339±2.16 14.051±0.00 12.752±0.59 16.853±3.44 13.104±2.68 41.130±2.72
ENSMUST00000172764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.116±0.00 17.709±0.00
ENSMUSG00000041775 ENSMUST00000075667 12.952±1.69 33.437±13.20 11.111±1.47 17.782±0.00 16.515±4.76 7.208±2.14 10.161±1.34 9.282±1.80 6.423±3.01 13.846±4.17 12.973±1.28 24.093±1.85 N/A 11.594±1.02
ENSMUST00000118810 10.320±0.00 14.817±0.00 N/A N/A 22.825±10.31 7.786±0.00 7.307±0.00 8.369±2.02 N/A N/A N/A 19.312±3.23 12.940±0.00 N/A
ENSMUST00000119664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.582±2.25 N/A N/A
ENSMUSG00000078566 ENSMUST00000106112 69.457±40.28 35.579±8.71 23.207±1.73 8.033±3.45 32.071±12.10 3.280±1.04 30.004±2.51 40.542±2.55 54.116±42.03 13.437±1.67 98.687±15.08 16.991±10.00 36.238±29.49 3.515±1.64
ENSMUST00000125359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130500 N/A N/A N/A N/A N/A 2.454±1.64 N/A N/A 26.955±21.04 N/A N/A 7.237±0.00 N/A 0.332±0.00
ENSMUST00000141223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148970 N/A 71.500±10.09 N/A N/A 17.971±2.70 5.831±1.54 N/A N/A N/A 7.347±0.18 N/A 12.025±5.27 N/A 2.926±0.00

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