C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00047Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000093183-ENSG00000093183 CGP 9606 3:42547969-42601080
GeneTranscriptPositionBiotype
ENSG00000008324 (SS18L2)
synovial sarcoma translocation gene on chromosome 18-like 2
ENST00000011691 (SS18L2-201) 42590806-42594998 protein_coding
ENST00000447630 (SS18L2-001) 42581840-42595114 protein_coding
ENST00000474941 (SS18L2-002) 42591274-42594660 retained_intron
ENSG00000114857 (NKTR)
natural killer cell triggering receptor
ENST00000232978 (NKTR-001) 42600614-42648741 protein_coding
ENST00000429888 (NKTR-003) 42600682-42648735 nonsense_mediated_decay
ENST00000442970 (NKTR-005) 42600743-42620316 protein_coding
ENST00000445842 (NKTR-010) 42600761-42620043 protein_coding
ENST00000459950 (NKTR-004) 42600718-42603056 retained_intron
ENST00000460807 (NKTR-013) 42633209-42637000 retained_intron
ENST00000460910 (NKTR-009) 42600660-42611184 processed_transcript
ENST00000464315 (NKTR-017) 42633637-42635057 retained_intron
ENST00000465584 (NKTR-007) 42619819-42638219 retained_intron
ENST00000466553 (NKTR-016) 42621005-42631316 retained_intron
ENST00000468735 (NKTR-002) 42600655-42638226 retained_intron
ENST00000472127 (NKTR-012) 42631033-42633112 retained_intron
ENST00000472258 (NKTR-014) 42635080-42637156 retained_intron
ENST00000478488 (NKTR-011) 42600980-42627468 retained_intron
ENST00000487466 (NKTR-006) 42600672-42627310 retained_intron
ENST00000490189 (NKTR-015) 42643652-42646116 retained_intron
ENST00000498730 (NKTR-008) 42627186-42637035 retained_intron
ENST00000508351 (NKTR-018) 42633209-42635481 retained_intron
ENST00000617821 (NKTR-201) 42600686-42648733 protein_coding
CIL_00047Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061536-ENSMUSG00000032526 CGP 10090 9:121680047-121712921
GeneTranscriptPositionBiotype
ENSMUSG00000032526 (Deb1)
differentially expressed in B16F10 1
ENSMUST00000035113 (Deb1-201) 121710389-121712921 protein_coding
ENSMUSG00000061536 (Sec22c)
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
ENSMUST00000078547 (Sec22c-201) 121680047-121705029 protein_coding
ENSMUST00000111560 (Sec22c-001) 121683022-121705465 protein_coding
ENSMUST00000132733 (Sec22c-004) 121688198-121690473 retained_intron
ENSMUST00000139193 (Sec22c-003) 121684551-121704979 nonsense_mediated_decay
ENSMUST00000154978 (Sec22c-002) 121695616-121705490 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047Z_0001ENSG00000008324ENST00000011691ENST00000447630ENST00000474941ENSG00000114857ENST00000232978ENST00000429888ENST00000442970ENST00000445842ENST00000459950ENST00000460807ENST00000460910ENST00000464315ENST00000465584ENST00000466553ENST00000468735ENST00000472127ENST00000472258ENST00000478488ENST00000487466ENST00000490189ENST00000498730ENST00000508351ENST00000617821CIL_00047Z_0002ENSMUSG00000032526ENSMUST00000035113ENSMUSG00000061536ENSMUST00000078547ENSMUST00000111560ENSMUST00000132733ENSMUST00000139193ENSMUST00000154978
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047Z_0001ENSG00000008324ENST00000011691ENSG00000114857ENST00000232978ENST00000429888ENST00000468735ENST00000498730ENST00000617821CIL_00047Z_0002ENSMUSG00000032526ENSMUST00000035113ENSMUSG00000061536ENSMUST00000078547ENSMUST00000111560ENSMUST00000139193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008324 ENST00000011691 N/A N/A N/A N/A N/A 11.484±0.00 N/A N/A 10.311±0.00 24.783±0.00 7.643±0.00 N/A 6.776±0.00 N/A
ENST00000447630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000114857 ENST00000232978 N/A 8.624±0.00 2.113±0.00 3.704±0.86 3.979±0.00 3.640±0.72 2.260±0.72 2.424±0.17 3.228±0.92 5.113±0.00 1.043±0.00 7.881±2.04 2.564±1.17 10.912±6.39
ENST00000429888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.150±0.00 N/A N/A
ENST00000442970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468735 N/A N/A 2.076±0.00 2.524±0.00 5.429±0.00 N/A N/A 1.959±0.00 4.094±0.00 8.960±0.00 N/A 4.320±0.00 N/A N/A
ENST00000472127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498730 N/A N/A 3.882±0.00 N/A 9.004±0.00 7.091±0.00 N/A 3.634±0.00 5.254±0.00 11.531±0.00 0.680±0.00 N/A N/A N/A
ENST00000508351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A 7.952±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032526 ENSMUST00000035113 14.096±4.30 3.251±0.66 18.346±2.20 29.220±10.73 15.933±9.59 8.674±0.96 59.738±3.02 29.393±3.05 25.885±4.19 9.289±0.92 64.659±4.73 7.993±6.56 23.136±8.07 4.895±0.66
ENSMUSG00000061536 ENSMUST00000078547 1.815±0.79 3.003±0.44 1.592±0.28 4.224±2.15 1.475±0.48 2.712±0.33 1.090±0.26 1.915±0.17 1.538±0.64 3.110±0.26 1.256±0.42 4.070±2.15 1.076±0.71 1.107±0.30
ENSMUST00000111560 N/A 1.080±0.39 N/A N/A N/A 0.798±0.12 N/A 0.478±0.00 0.399±0.00 0.736±0.00 0.388±0.00 N/A 0.436±0.19 0.983±0.43
ENSMUST00000132733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139193 N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A N/A 1.999±0.08
ENSMUST00000154978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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