C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024479-ENSDARG00000039220 CGP 7955 2:8846226-9044160
GeneTranscriptPositionBiotype
ENSDARG00000024479 (pigk)
phosphatidylinositol glycan, class K 		ENSDART00000028906 (pigk-001) 8846226-8922838 protein_coding
CIL_00048M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039047-ENSMUSG00000039037 CGP 10090 3:152714100-152982246
GeneTranscriptPositionBiotype
ENSMUSG00000039037 (St6galnac5)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 		ENSMUST00000044278 (St6galnac5-001) 152817081-152982246 protein_coding
ENSMUST00000161757 (St6galnac5-002) 152975374-152982052 processed_transcript
ENSMUSG00000039047 (Pigk)
phosphatidylinositol glycan anchor biosynthesis, class K 		ENSMUST00000045029 (Pigk-002) 152714113-152785922 protein_coding
ENSMUST00000051510 (Pigk-004) 152738262-152785848 processed_transcript
ENSMUST00000159045 (Pigk-008) 152738043-152740196 processed_transcript
ENSMUST00000159899 (Pigk-001) 152714100-152788898 protein_coding
ENSMUST00000160651 (Pigk-007) 152763381-152766524 processed_transcript
ENSMUST00000161596 (Pigk-005) 152714120-152980408 nonsense_mediated_decay
ENSMUST00000162642 (Pigk-006) 152714113-152842921 nonsense_mediated_decay
ENSMUST00000162835 (Pigk-003) 152714106-152741164 retained_intron
ENSMUSG00000090017 (Gm16213)
predicted gene 16213 		ENSMUST00000160076 (Gm16213-001) 152920240-152921399 antisense
ENSMUSG00000090040 (Gm16232)
predicted gene 16232 		ENSMUST00000162856 (Gm16232-001) 152876051-152876217 processed_pseudogene
ENSMUSG00000090095 (Rpl29-ps1)
ribosomal protein L29, pseudogene 1 		ENSMUST00000161849 (Rpl29-ps1-001) 152780774-152782061 processed_pseudogene
ENSMUSG00000090163 (Gm16231)
predicted gene 16231 		ENSMUST00000160432 (Gm16231-001) 152943313-152943944 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048M_0001ENSDARG00000024479ENSDART00000028906CIL_00048M_0002ENSMUSG00000039037ENSMUST00000044278ENSMUST00000161757ENSMUSG00000039047ENSMUST00000045029ENSMUST00000051510ENSMUST00000159045ENSMUST00000159899ENSMUST00000160651ENSMUST00000161596ENSMUST00000162642ENSMUST00000162835ENSMUSG00000090017ENSMUST00000160076ENSMUSG00000090040ENSMUST00000162856ENSMUSG00000090095ENSMUST00000161849ENSMUSG00000090163ENSMUST00000160432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048M_0001ENSDARG00000024479ENSDART00000028906CIL_00048M_0002ENSMUSG00000039037ENSMUST00000044278ENSMUST00000161757ENSMUSG00000039047ENSMUST00000045029ENSMUST00000051510ENSMUST00000159899ENSMUST00000161596ENSMUST00000162835ENSMUSG00000090017ENSMUST00000160076ENSMUSG00000090040ENSMUST00000162856ENSMUSG00000090095ENSMUST00000161849ENSMUSG00000090163ENSMUST00000160432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024479 ENSDART00000028906 N/A N/A N/A 2.629±1.52 N/A N/A 2.269±0.70 2.973±0.83 0.211±0.00 N/A 0.596±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039037 ENSMUST00000044278 1.195±0.14 1.398±0.10 N/A 8.365±0.59 2.801±1.25 0.737±0.12 N/A 0.903±0.02 N/A 0.782±0.12 N/A 1.047±0.31 N/A N/A
ENSMUST00000161757 N/A N/A N/A N/A 9.999±0.30 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039047 ENSMUST00000045029 8.835±2.40 6.215±1.51 3.261±0.00 N/A 4.372±0.70 3.267±0.61 2.240±0.20 5.640±0.71 5.526±1.56 3.624±1.12 N/A 5.111±1.23 4.214±1.00 9.307±3.71
ENSMUST00000051510 N/A N/A 3.456±0.56 29.392±0.00 N/A N/A N/A N/A 3.127±1.02 N/A N/A 16.821±7.59 13.942±8.90 14.857±0.00
ENSMUST00000159045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159899 4.166±1.04 4.643±2.00 1.310±0.14 4.989±2.05 1.468±0.38 2.570±0.81 1.141±0.21 2.647±0.11 1.530±0.34 2.965±0.85 3.181±1.07 3.520±2.39 2.048±0.60 1.205±0.27
ENSMUST00000160651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.012±0.16
ENSMUST00000162642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162835 N/A 7.004±0.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090017 ENSMUST00000160076 0.095±0.00 0.230±0.00 0.044±0.00 N/A N/A N/A 0.064±0.00 0.081±0.00 0.048±0.01 N/A N/A N/A 0.068±0.00 0.071±0.01
ENSMUSG00000090040 ENSMUST00000162856 N/A N/A N/A 2.395±0.10 134.286±14.87 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090095 ENSMUST00000161849 0.135±0.07 0.201±0.01 0.076±0.01 0.023±0.00 N/A 0.277±0.11 0.245±0.05 0.140±0.05 0.117±0.07 0.276±0.08 N/A 0.275±0.13 0.034±0.02 0.148±0.09
ENSMUSG00000090163 ENSMUST00000160432 N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A 2.164±1.37

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