C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00049I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070346-ENSDARG00000070343 CGP 7955 23:36152729-36169108
GeneTranscriptPositionBiotype
ENSDARG00000070343 (hoxc6a)
homeo box C6a
ENSDART00000103035 (hoxc6a-201) 36166802-36169108 protein_coding
ENSDART00000130090 (hoxc6a-001) 36167085-36168451 protein_coding
ENSDARG00000070346 (hoxc8a)
homeo box C8a
ENSDART00000103139 (hoxc8a-001) 36152729-36155179 protein_coding
CIL_00049I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001657-ENSMUSG00000001661 CGP 10090 15:102990607-103011881
GeneTranscriptPositionBiotype
ENSMUSG00000001657 (Hoxc8)
homeobox C8
ENSMUST00000001703 (Hoxc8-001) 102990607-102993821 protein_coding
ENSMUST00000189484 (Hoxc8-002) 102991889-102994111 retained_intron
ENSMUSG00000001661 (Hoxc6)
homeobox C6
ENSMUST00000001711 (Hoxc6-001) 103009573-103011881 protein_coding
ENSMUST00000173210 (Hoxc6-002) 102998257-103010768 processed_transcript
ENSMUST00000173421 (Hoxc6-003) 103000529-103010006 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049I_0001ENSDARG00000070343ENSDART00000103035ENSDART00000130090ENSDARG00000070346ENSDART00000103139CIL_00049I_0002ENSMUSG00000001657ENSMUST00000001703ENSMUST00000189484ENSMUSG00000001661ENSMUST00000001711ENSMUST00000173210ENSMUST00000173421
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049I_0001ENSDARG00000070343ENSDART00000103035ENSDART00000130090ENSDARG00000070346ENSDART00000103139CIL_00049I_0002ENSMUSG00000001657ENSMUST00000001703ENSMUST00000189484ENSMUSG00000001661ENSMUST00000001711ENSMUST00000173210ENSMUST00000173421
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070343 ENSDART00000103035 N/A N/A N/A 0.282±0.09 N/A N/A 0.071±0.03 0.972±0.46 N/A N/A 1.164±0.00 N/A N/A N/A
ENSDART00000130090 N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A 0.606±0.00 N/A N/A N/A
ENSDARG00000070346 ENSDART00000103139 N/A N/A N/A N/A N/A N/A N/A 1.063±0.00 N/A N/A 6.581±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001657 ENSMUST00000001703 11.249±7.05 10.458±2.65 0.137±0.07 0.010±0.00 9.468±3.59 0.073±0.05 N/A 1.598±0.35 0.052±0.07 0.027±0.01 0.232±0.08 5.395±1.20 1.069±1.19 0.137±0.05
ENSMUST00000189484 N/A N/A 0.058±0.03 N/A N/A N/A N/A 0.366±0.11 0.028±0.00 N/A 0.154±0.06 2.914±0.65 0.253±0.36 0.037±0.03
ENSMUSG00000001661 ENSMUST00000001711 12.804±5.98 21.416±2.53 0.712±0.15 0.128±0.08 8.820±0.93 0.122±0.03 0.033±0.00 8.587±0.87 0.092±0.05 0.124±0.09 1.887±0.45 11.306±5.90 1.408±1.15 0.438±0.06
ENSMUST00000173210 N/A N/A N/A N/A N/A 0.086±0.00 N/A 2.917±0.25 0.018±0.00 N/A N/A 5.209±0.00 0.182±0.04 N/A
ENSMUST00000173421 N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A 1.665±0.00 0.361±0.07

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