C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004AR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019791-ENSDARG00000067964 CGP 7955 7:17881492-18023057
GeneTranscriptPositionBiotype
ENSDARG00000019791 (prmt3)
protein arginine methyltransferase 3
ENSDART00000013409 (prmt3-001) 17881492-17998778 protein_coding
ENSDART00000147140 (prmt3-002) 17896049-17965963 protein_coding
ENSDARG00000067964 (slc6a5)
solute carrier family 6 (neurotransmitter transporter, glycine), member 5
ENSDART00000097982 (slc6a5-001) 18004520-18023057 protein_coding
CIL_0004AR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185238-ENSG00000165970 CGP 9606 11:20387530-20659285
GeneTranscriptPositionBiotype
ENSG00000185238 (PRMT3)
protein arginine methyltransferase 3
ENST00000330796 (PRMT3-002) 20387558-20509294 nonsense_mediated_decay
ENST00000331079 (PRMT3-001) 20387530-20509253 protein_coding
ENST00000437750 (PRMT3-003) 20387716-20508708 protein_coding
ENST00000525188 (PRMT3-006) 20387640-20397662 nonsense_mediated_decay
ENST00000526583 (PRMT3-005) 20387747-20392251 nonsense_mediated_decay
ENST00000529592 (PRMT3-004) 20405446-20509282 retained_intron
ENSG00000255291 (RP11-701I24.1)
ENST00000525121 (RP11-701I24.1-001) 20574186-20574950 processed_pseudogene
CIL_0004AR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030505-ENSMUSG00000039728 CGP 10090 7:49778346-49963856
GeneTranscriptPositionBiotype
ENSMUSG00000030505 (Prmt3)
protein arginine N-methyltransferase 3
ENSMUST00000032715 (Prmt3-001) 49778346-49858265 protein_coding
ENSMUST00000130907 (Prmt3-003) 49798390-49827090 protein_coding
ENSMUST00000140656 (Prmt3-002) 49778346-49782505 protein_coding
ENSMUST00000145666 (Prmt3-007) 49778544-49787314 processed_transcript
ENSMUST00000146052 (Prmt3-008) 49779876-49787344 protein_coding
ENSMUST00000147401 (Prmt3-005) 49778437-49826894 nonsense_mediated_decay
ENSMUST00000148996 (Prmt3-004) 49778439-49780635 processed_transcript
ENSMUST00000152127 (Prmt3-006) 49778437-49782162 processed_transcript
ENSMUSG00000039728 (Slc6a5)
solute carrier family 6 (neurotransmitter transporter, glycine), member 5
ENSMUST00000056442 (Slc6a5-201) 49910146-49963856 protein_coding
ENSMUST00000107605 (Slc6a5-202) 49911700-49959493 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AR_0001ENSDARG00000019791ENSDART00000013409ENSDART00000147140ENSDARG00000067964ENSDART00000097982CIL_0004AR_0002ENSG00000185238ENST00000330796ENST00000331079ENST00000437750ENST00000525188ENST00000526583ENST00000529592ENSG00000255291ENST00000525121CIL_0004AR_0003ENSMUSG00000030505ENSMUST00000032715ENSMUST00000130907ENSMUST00000140656ENSMUST00000145666ENSMUST00000146052ENSMUST00000147401ENSMUST00000148996ENSMUST00000152127ENSMUSG00000039728ENSMUST00000056442ENSMUST00000107605
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AR_0001ENSDARG00000019791ENSDART00000013409ENSDARG00000067964ENSDART00000097982CIL_0004AR_0002ENSG00000185238ENST00000330796ENST00000331079ENST00000437750ENST00000529592ENSG00000255291ENST00000525121CIL_0004AR_0003ENSMUSG00000030505ENSMUST00000032715ENSMUST00000140656ENSMUST00000146052ENSMUST00000147401ENSMUSG00000039728ENSMUST00000056442ENSMUST00000107605
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019791 ENSDART00000013409 N/A N/A N/A 2.087±1.80 N/A N/A 4.308±0.02 3.946±5.16 2.844±0.00 N/A 2.560±0.00 N/A N/A N/A
ENSDART00000147140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000067964 ENSDART00000097982 N/A N/A N/A 0.767±0.11 N/A N/A 0.019±0.00 0.039±0.00 N/A N/A 0.047±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185238 ENST00000330796 N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A 0.564±0.24 1.425±0.44 0.300±0.00 0.910±0.00
ENST00000331079 1.183±0.00 1.252±0.00 1.139±0.00 2.854±0.17 1.909±0.00 1.069±0.16 1.442±1.05 1.615±0.84 1.212±0.47 0.785±0.00 1.862±0.00 3.505±1.42 1.630±0.43 1.609±0.25
ENST00000437750 0.922±0.00 1.773±0.00 0.342±0.00 1.260±0.00 0.473±0.00 1.061±0.24 1.286±0.00 0.639±0.17 0.557±0.00 0.998±0.00 0.985±0.47 4.175±2.96 N/A 2.652±0.00
ENST00000525188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529592 N/A N/A 0.187±0.00 0.519±0.00 0.812±0.00 1.277±0.00 0.364±0.00 0.340±0.08 1.128±0.00 0.736±0.00 N/A N/A N/A N/A
ENSG00000255291 ENST00000525121 0.060±0.00 0.064±0.00 N/A 0.032±0.00 0.032±0.00 N/A 0.030±0.00 N/A N/A N/A 0.030±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030505 ENSMUST00000032715 7.112±2.51 6.440±0.47 8.099±1.16 9.922±4.41 5.762±2.30 4.268±1.00 4.125±0.13 5.909±0.98 5.987±4.02 4.109±1.33 3.950±0.77 11.630±3.66 8.082±3.43 1.520±0.53
ENSMUST00000130907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140656 N/A 46.429±10.98 N/A N/A 28.120±14.04 13.724±3.81 N/A 8.793±0.00 1.575±0.30 11.556±5.31 N/A 46.531±4.51 N/A 1.229±0.22
ENSMUST00000145666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.543±0.00
ENSMUST00000147401 N/A N/A N/A 3.472±0.00 N/A N/A N/A N/A N/A N/A N/A 8.366±0.00 6.698±0.00 0.548±0.00
ENSMUST00000148996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039728 ENSMUST00000056442 N/A 0.595±0.00 N/A 1.212±1.54 N/A 0.010±0.00 0.006±0.00 0.005±0.00 0.005±0.00 0.006±0.00 N/A 0.017±0.01 0.004±0.00 0.013±0.01
ENSMUST00000107605 N/A 0.798±0.06 N/A N/A 0.035±0.00 0.021±0.00 N/A 0.030±0.02 0.003±0.00 N/A N/A N/A 0.020±0.01 0.013±0.00

Loading