C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004B8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168944-ENSG00000151292 CGP 9606 5:123344885-123617045
GeneTranscriptPositionBiotype
ENSG00000151292 (CSNK1G3)
casein kinase 1, gamma 3 		ENST00000345990 (CSNK1G3-201) 123512099-123617040 protein_coding
ENST00000360683 (CSNK1G3-002) 123545634-123617045 protein_coding
ENST00000361991 (CSNK1G3-001) 123545634-123615446 protein_coding
ENST00000508708 (CSNK1G3-007) 123512191-123545956 processed_transcript
ENST00000510842 (CSNK1G3-003) 123545417-123614853 protein_coding
ENST00000511130 (CSNK1G3-005) 123512260-123614455 protein_coding
ENST00000512718 (CSNK1G3-004) 123512260-123614560 protein_coding
ENST00000514131 (CSNK1G3-006) 123552965-123557564 retained_intron
ENST00000515322 (CSNK1G3-008) 123588425-123615017 protein_coding
ENST00000521364 (CSNK1G3-009) 123545415-123615455 protein_coding
ENSG00000168944 (CEP120)
centrosomal protein 120kDa 		ENST00000306467 (CEP120-001) 123344885-123423303 protein_coding
ENST00000306481 (CEP120-201) 123344886-123423592 protein_coding
ENST00000328236 (CEP120-202) 123344886-123423592 protein_coding
ENST00000503049 (CEP120-008) 123390909-123393449 retained_intron
ENST00000508138 (CEP120-006) 123345003-123423544 nonsense_mediated_decay
ENST00000508442 (CEP120-002) 123350060-123423592 protein_coding
ENST00000510582 (CEP120-009) 123399252-123423558 protein_coding
ENST00000513565 (CEP120-007) 123346400-123423344 nonsense_mediated_decay
ENST00000515110 (CEP120-005) 123418394-123423324 protein_coding
ENSG00000249400 (HMGB3P17)
high mobility group box 3 pseudogene 17 		ENST00000504195 (HMGB3P17-001) 123468781-123469429 processed_pseudogene
ENSG00000250539 (KRT8P33)
keratin 8 pseudogene 33 		ENST00000508125 (KRT8P33-001) 123400922-123402344 processed_pseudogene
ENSG00000279772 (CTD-2169H9.1)
 ENST00000623961 (CTD-2169H9.1-001) 123508736-123509187 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0004B8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048799-ENSMUSG00000073563 CGP 10090 18:53681724-53955684
GeneTranscriptPositionBiotype
ENSMUSG00000048799 (Cep120)
centrosomal protein 120 		ENSMUST00000049811 (Cep120-201) 53681724-53744547 protein_coding
ENSMUSG00000073563 (Csnk1g3)
casein kinase 1, gamma 3 		ENSMUST00000069597 (Csnk1g3-201) 53862113-53955684 protein_coding

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B8_0001ENSG00000151292ENST00000345990ENST00000360683ENST00000361991ENST00000508708ENST00000510842ENST00000511130ENST00000512718ENST00000514131ENST00000515322ENST00000521364ENSG00000168944ENST00000306467ENST00000306481ENST00000328236ENST00000503049ENST00000508138ENST00000508442ENST00000510582ENST00000513565ENST00000515110ENSG00000249400ENST00000504195ENSG00000250539ENST00000508125ENSG00000279772ENST00000623961CIL_0004B8_0002ENSMUSG00000048799ENSMUST00000049811ENSMUSG00000073563ENSMUST00000069597
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B8_0001ENSG00000151292ENST00000345990ENST00000360683ENST00000361991ENST00000508708ENST00000510842ENST00000511130ENST00000521364ENSG00000168944ENST00000306467ENST00000306481ENST00000328236ENST00000508138ENST00000508442ENST00000513565ENSG00000249400ENST00000504195ENSG00000250539ENST00000508125ENSG00000279772ENST00000623961CIL_0004B8_0002ENSMUSG00000048799ENSMUST00000049811ENSMUSG00000073563ENSMUST00000069597
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151292 ENST00000345990 N/A N/A N/A N/A N/A 1.535±0.00 0.872±0.00 N/A 1.255±0.00 N/A 0.043±0.00 1.496±0.61 0.854±0.27 0.952±0.00
ENST00000360683 N/A 0.515±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.38 0.537±0.00 2.528±0.00
ENST00000361991 1.802±0.00 N/A N/A 2.335±0.00 N/A 1.117±0.14 1.096±0.00 1.163±0.00 N/A N/A 0.443±0.00 3.004±0.00 1.966±0.00 5.412±0.00
ENST00000508708 N/A N/A 1.279±0.00 6.482±0.00 N/A 5.741±0.00 N/A N/A 9.147±0.00 N/A N/A N/A N/A N/A
ENST00000510842 N/A N/A N/A 5.737±0.00 6.699±0.00 2.985±0.00 3.273±0.00 4.973±0.00 5.969±0.00 7.562±0.00 N/A 3.859±0.00 N/A N/A
ENST00000511130 N/A N/A N/A N/A N/A N/A 1.332±0.00 N/A N/A N/A N/A 3.895±0.00 4.305±0.00 11.777±0.00
ENST00000512718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521364 1.793±0.00 N/A 1.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.641±0.31 N/A 2.052±0.00
ENSG00000168944 ENST00000306467 3.495±0.00 3.052±0.00 N/A 2.019±0.85 1.750±0.00 1.986±0.00 1.515±0.82 1.594±0.76 0.702±0.25 1.065±0.06 0.675±0.00 2.380±1.60 1.027±0.66 1.377±0.00
ENST00000306481 N/A N/A N/A 0.630±0.00 0.750±0.00 1.795±0.00 0.190±0.00 0.716±0.00 1.958±0.00 1.802±1.25 0.305±0.07 2.622±1.02 1.572±1.43 6.338±0.00
ENST00000328236 N/A N/A N/A N/A N/A 1.364±0.00 N/A N/A 0.850±0.00 1.016±0.55 1.186±0.00 0.626±0.00 N/A 7.061±0.00
ENST00000503049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508138 N/A N/A N/A N/A 1.119±0.72 N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A
ENST00000508442 N/A N/A N/A 0.995±0.00 1.509±0.00 1.366±0.00 0.608±0.00 N/A 2.055±0.00 N/A 0.540±0.00 0.807±0.00 N/A N/A
ENST00000510582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513565 N/A N/A 0.214±0.00 N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A 0.860±0.00 0.613±0.00 N/A
ENST00000515110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249400 ENST00000504195 0.090±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.03
ENSG00000250539 ENST00000508125 0.280±0.00 0.313±0.00 0.911±0.00 0.166±0.15 0.512±0.10 0.918±0.89 0.219±0.10 0.520±0.20 0.634±0.48 0.608±0.34 N/A 0.360±0.14 0.236±0.10 0.614±0.34
ENSG00000279772 ENST00000623961 N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.110±0.00 0.110±0.00 N/A 0.161±0.00 0.035±0.00 0.122±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048799 ENSMUST00000049811 7.411±1.25 4.226±0.71 7.208±0.03 11.044±1.95 6.396±1.52 4.335±0.55 4.853±0.67 5.881±2.08 3.598±1.24 9.379±1.10 3.750±0.32 6.923±2.95 8.702±1.28 26.731±5.26
ENSMUSG00000073563 ENSMUST00000069597 4.250±1.75 15.587±5.98 5.087±0.60 12.008±4.01 5.971±3.36 6.943±3.01 0.913±0.29 4.107±2.75 2.730±1.55 4.787±1.97 0.513±0.16 10.667±5.00 6.139±1.64 1.252±0.50

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