C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004G0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023878-ENSDARG00000044528 CGP 7955 6:12394519-12499964
GeneTranscriptPositionBiotype
ENSDARG00000023878 (stk24b)
serine/threonine kinase 24b (STE20 homolog, yeast) 		ENSDART00000090316 (stk24b-001) 12394519-12463279 protein_coding
ENSDART00000149328 (stk24b-003) 12439645-12452434 protein_coding
ENSDART00000149529 (stk24b-002) 12415769-12451043 protein_coding
ENSDARG00000044528 (slc15a1b)
solute carrier family 15 (oligopeptide transporter), member 1b 		ENSDART00000047896 (slc15a1b-001) 12468347-12499964 protein_coding
CIL_0004G0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102572-ENSG00000088386 CGP 9606 13:98445185-98752654
GeneTranscriptPositionBiotype
ENSG00000088386 (SLC15A1)
solute carrier family 15 (oligopeptide transporter), member 1 		ENST00000376494 (SLC15A1-002) 98720527-98726567 retained_intron
ENST00000376503 (SLC15A1-001) 98683801-98752654 protein_coding
ENST00000613008 (SLC15A1-201) 98720527-98726567 protein_coding
ENST00000618992 (SLC15A1-202) 98684631-98752654 protein_coding
ENSG00000102572 (STK24)
serine/threonine kinase 24 		ENST00000376547 (STK24-002) 98452159-98521998 protein_coding
ENST00000376554 (STK24-005) 98450201-98466561 protein_coding
ENST00000397517 (STK24-201) 98450199-98577151 protein_coding
ENST00000418038 (STK24-006) 98455421-98463785 protein_coding
ENST00000444574 (STK24-003) 98455982-98519267 protein_coding
ENST00000481288 (STK24-007) 98505028-98576204 processed_transcript
ENST00000491878 (STK24-004) 98474861-98577940 processed_transcript
ENST00000539966 (STK24-001) 98445185-98576863 protein_coding
ENSG00000152767 (FARP1)
FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 		ENST00000319562 (FARP1-001) 98143251-98455176 protein_coding
ENST00000376581 (FARP1-006) 98143480-98245304 protein_coding
ENST00000423063 (FARP1-005) 98431043-98436101 protein_coding
ENST00000427404 (FARP1-009) 98328718-98333238 processed_transcript
ENST00000457029 (FARP1-003) 98404071-98425498 processed_transcript
ENST00000457431 (FARP1-008) 98328880-98333238 processed_transcript
ENST00000490389 (FARP1-002) 98384361-98385786 retained_intron
ENST00000593548 (FARP1-042) 98383606-98385766 processed_transcript
ENST00000593990 (FARP1-036) 98328783-98333161 processed_transcript
ENST00000594346 (FARP1-019) 98445153-98447844 retained_intron
ENST00000594657 (FARP1-037) 98328785-98333768 processed_transcript
ENST00000595366 (FARP1-029) 98328778-98333238 processed_transcript
ENST00000595380 (FARP1-033) 98328778-98388478 processed_transcript
ENST00000595437 (FARP1-011) 98142562-98449773 protein_coding
ENST00000595817 (FARP1-040) 98328228-98384831 processed_transcript
ENST00000596256 (FARP1-013) 98431081-98440796 protein_coding
ENST00000596467 (FARP1-034) 98328778-98385995 retained_intron
ENST00000596545 (FARP1-031) 98328778-98334349 processed_transcript
ENST00000596580 (FARP1-017) 98399286-98407494 retained_intron
ENST00000596613 (FARP1-027) 98328778-98377918 processed_transcript
ENST00000597596 (FARP1-014) 98449011-98449770 processed_transcript
ENST00000597777 (FARP1-018) 98431157-98434997 retained_intron
ENST00000598346 (FARP1-026) 98328778-98338879 processed_transcript
ENST00000598389 (FARP1-039) 98177817-98384844 protein_coding
ENST00000598698 (FARP1-023) 98328778-98332871 processed_transcript
ENST00000599040 (FARP1-016) 98331758-98385754 protein_coding
ENST00000599151 (FARP1-022) 98328778-98332880 processed_transcript
ENST00000600032 (FARP1-028) 98328778-98384832 processed_transcript
ENST00000600190 (FARP1-012) 98390585-98395420 retained_intron
ENST00000600380 (FARP1-015) 98448874-98449515 processed_transcript
ENST00000600648 (FARP1-010) 98143180-98213232 processed_transcript
ENST00000601009 (FARP1-038) 98377821-98389693 protein_coding
ENST00000601133 (FARP1-035) 98328780-98345610 processed_transcript
ENST00000601361 (FARP1-007) 98328191-98343812 processed_transcript
ENST00000601656 (FARP1-020) 98328778-98329754 processed_transcript
ENST00000601762 (FARP1-030) 98328778-98333235 processed_transcript
ENST00000601853 (FARP1-032) 98328778-98382540 processed_transcript
ENST00000602015 (FARP1-021) 98328778-98329984 processed_transcript
ENST00000602171 (FARP1-025) 98328778-98338879 processed_transcript
ENST00000602263 (FARP1-041) 98340689-98385766 processed_transcript
ENST00000602272 (FARP1-024) 98328778-98338758 processed_transcript
ENSG00000217686 (NUS1P4)
nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 4 		ENST00000401550 (NUS1P4-001) 98610292-98610876 processed_pseudogene
ENSG00000233662 (CALM2P4)
calmodulin 2 pseudogene 4 		ENST00000430810 (CALM2P4-001) 98640814-98641239 processed_pseudogene
ENSG00000243366 (RN7SL60P)
RNA, 7SL, cytoplasmic 60, pseudogene 		ENST00000476209 (RN7SL60P-201) 98671980-98672278 misc_RNA
ENSG00000271437 (RP11-295B17.6)
 ENST00000604953 (RP11-295B17.6-001) 98553243-98553780 processed_pseudogene
CIL_0004G0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063410-ENSMUSG00000025557 CGP 10090 14:121286343-121505254
GeneTranscriptPositionBiotype
ENSMUSG00000025557 (Slc15a1)
solute carrier family 15 (oligopeptide transporter), member 1 		ENSMUST00000088386 (Slc15a1-201) 121459621-121505254 protein_coding
ENSMUSG00000063410 (Stk24)
serine/threonine kinase 24 		ENSMUST00000079817 (Stk24-201) 121286343-121379334 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G0_0001ENSDARG00000023878ENSDART00000090316ENSDART00000149328ENSDART00000149529ENSDARG00000044528ENSDART00000047896CIL_0004G0_0002ENSG00000088386ENST00000376494ENST00000376503ENST00000613008ENST00000618992ENSG00000102572ENST00000376547ENST00000376554ENST00000397517ENST00000418038ENST00000444574ENST00000481288ENST00000491878ENST00000539966ENSG00000152767ENST00000319562ENST00000376581ENST00000423063ENST00000427404ENST00000457029ENST00000457431ENST00000490389ENST00000593548ENST00000593990ENST00000594346ENST00000594657ENST00000595366ENST00000595380ENST00000595437ENST00000595817ENST00000596256ENST00000596467ENST00000596545ENST00000596580ENST00000596613ENST00000597596ENST00000597777ENST00000598346ENST00000598389ENST00000598698ENST00000599040ENST00000599151ENST00000600032ENST00000600190ENST00000600380ENST00000600648ENST00000601009ENST00000601133ENST00000601361ENST00000601656ENST00000601762ENST00000601853ENST00000602015ENST00000602171ENST00000602263ENST00000602272ENSG00000217686ENST00000401550ENSG00000233662ENST00000430810ENSG00000243366ENST00000476209ENSG00000271437ENST00000604953CIL_0004G0_0003ENSMUSG00000025557ENSMUST00000088386ENSMUSG00000063410ENSMUST00000079817
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G0_0001ENSDARG00000023878ENSDART00000090316ENSDART00000149529ENSDARG00000044528ENSDART00000047896CIL_0004G0_0002ENSG00000088386ENST00000376494ENST00000376503ENST00000618992ENSG00000102572ENST00000376547ENST00000397517ENST00000444574ENST00000491878ENST00000539966ENSG00000152767ENST00000319562ENST00000595437ENST00000596580ENSG00000217686ENST00000401550ENSG00000233662ENST00000430810ENSG00000243366ENST00000476209ENSG00000271437ENST00000604953CIL_0004G0_0003ENSMUSG00000025557ENSMUST00000088386ENSMUSG00000063410ENSMUST00000079817
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023878 ENSDART00000090316 N/A N/A N/A 14.937±0.00 N/A N/A 5.987±4.54 17.443±0.00 N/A N/A 1.827±0.00 N/A N/A N/A
ENSDART00000149328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149529 N/A N/A N/A 9.084±0.00 N/A N/A 4.497±0.00 8.581±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000044528 ENSDART00000047896 N/A N/A N/A 0.180±0.09 N/A N/A 0.188±0.05 3.035±0.00 0.178±0.00 N/A 0.025±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088386 ENST00000376494 0.089±0.00 N/A N/A 0.096±0.00 0.103±0.00 0.105±0.01 0.082±0.00 N/A N/A 0.062±0.00 0.127±0.10 0.018±0.00 N/A 0.131±0.00
ENST00000376503 0.209±0.00 0.322±0.00 N/A 0.172±0.00 0.157±0.00 0.155±0.00 0.049±0.00 3.616±0.94 3.557±0.00 0.116±0.00 0.012±0.00 2.219±1.99 0.150±0.09 0.234±0.19
ENST00000613008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618992 N/A N/A N/A N/A N/A 0.097±0.00 N/A 2.779±0.00 0.050±0.00 0.072±0.00 N/A N/A N/A N/A
ENSG00000102572 ENST00000376547 38.960±0.00 30.083±0.00 N/A 17.297±8.91 18.676±7.89 26.094±16.71 15.270±12.10 31.134±0.00 15.299±0.00 23.096±14.53 13.886±7.93 29.711±11.14 26.753±0.00 31.623±18.61
ENST00000376554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397517 N/A N/A N/A N/A N/A 6.691±0.00 1.295±0.00 N/A N/A N/A 1.392±0.00 26.659±0.00 N/A 14.856±0.00
ENST00000418038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.069±0.00 N/A N/A
ENST00000481288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 124.478±0.00 75.258±0.00 55.214±0.00
ENST00000539966 4.161±0.00 2.878±0.00 N/A 4.101±0.00 3.517±0.00 7.401±0.00 2.407±0.00 7.010±5.67 6.250±0.00 3.727±1.86 1.619±0.00 6.936±2.01 6.260±0.47 6.654±0.00
ENSG00000152767 ENST00000319562 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.486±0.00 N/A N/A N/A N/A
ENST00000376581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595437 7.849±0.00 N/A 12.717±0.00 3.959±0.00 4.997±0.00 N/A N/A 7.837±5.03 N/A N/A N/A 8.725±1.58 9.807±1.13 10.375±0.53
ENST00000595817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596580 N/A N/A 12.657±0.00 4.869±0.17 3.356±0.00 3.224±0.00 N/A 2.844±0.92 4.242±0.00 2.562±0.00 N/A 4.520±0.00 N/A N/A
ENST00000596613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217686 ENST00000401550 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000233662 ENST00000430810 0.028±0.00 0.059±0.00 N/A 0.232±0.00 0.029±0.00 0.054±0.00 0.028±0.00 N/A N/A N/A 0.054±0.00 N/A N/A 0.026±0.00
ENSG00000243366 ENST00000476209 N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000271437 ENST00000604953 N/A 0.484±0.00 0.162±0.00 0.135±0.00 0.203±0.00 0.744±0.00 0.077±0.04 N/A 0.962±0.00 0.755±0.00 0.740±0.00 0.279±0.37 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025557 ENSMUST00000088386 0.230±0.18 0.083±0.05 0.023±0.00 0.014±0.01 0.116±0.10 28.249±6.76 0.014±0.00 0.142±0.08 0.018±0.01 0.983±0.53 0.048±0.00 3.083±0.95 0.318±0.20 0.321±0.22
ENSMUSG00000063410 ENSMUST00000079817 16.417±0.54 13.189±5.40 12.323±4.25 10.734±3.65 13.020±2.84 13.364±6.66 N/A 12.522±0.44 6.854±4.61 13.521±0.89 1.924±0.48 15.837±5.23 24.174±5.04 0.772±0.00

Loading