C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004G3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000001835-ENSDARG00000040985 CGP 7955 9:32621978-32866873
GeneTranscriptPositionBiotype
ENSDARG00000001835 (nalcn)
sodium leak channel, non-selective
ENSDART00000048469 (nalcn-201) 32621978-32775688 protein_coding
ENSDART00000060066 (nalcn-202) 32729440-32780414 protein_coding
ENSDART00000135022 (nalcn-002) 32622733-32775039 protein_coding
ENSDART00000142289 (nalcn-003) 32625538-32629324 protein_coding
ENSDART00000145204 (nalcn-001) 32729439-32780414 protein_coding
ENSDARG00000040985 (itgbl1)
integrin, beta-like 1
ENSDART00000060054 (itgbl1-001) 32785936-32844111 protein_coding
ENSDART00000139584 (itgbl1-002) 32828651-32866873 protein_coding
CIL_0004G3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102452-ENSG00000198542 CGP 9606 13:101053776-101720856
GeneTranscriptPositionBiotype
ENSG00000102452 (NALCN)
sodium leak channel, non-selective
ENST00000251127 (NALCN-001) 101053776-101416355 protein_coding
ENST00000376200 (NALCN-201) 101368545-101399154 protein_coding
ENST00000467264 (NALCN-004) 101116440-101143221 processed_transcript
ENST00000470333 (NALCN-003) 101180373-101416492 processed_transcript
ENST00000497170 (NALCN-002) 101142743-101416462 retained_intron
ENSG00000102466 (FGF14)
fibroblast growth factor 14
ENST00000376131 (FGF14-002) 101710804-102401774 protein_coding
ENST00000376143 (FGF14-001) 101722831-101916645 protein_coding
ENST00000418923 (FGF14-004) 102401471-102402457 processed_transcript
ENST00000468052 (FGF14-003) 101868372-101875294 processed_transcript
ENSG00000233009 (NALCN-AS1)
NALCN antisense RNA 1
ENST00000457843 (NALCN-AS1-001) 100708325-101059286 antisense
CIL_0004G3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000197-ENSMUSG00000032925 CGP 10090 14:123276641-123975618
GeneTranscriptPositionBiotype
ENSMUSG00000000197 (Nalcn)
sodium leak channel, non-selective
ENSMUST00000000201 (Nalcn-201) 123276641-123627144 protein_coding
ENSMUSG00000032925 (Itgbl1)
integrin, beta-like 1
ENSMUST00000049681 (Itgbl1-001) 123659971-123975618 protein_coding
ENSMUST00000132026 (Itgbl1-003) 123661424-123975618 protein_coding
ENSMUST00000142161 (Itgbl1-002) 123660125-123975056 nonsense_mediated_decay
ENSMUSG00000082793 (Gm9308)
predicted gene 9308
ENSMUST00000119073 (Gm9308-001) 123698390-123698603 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G3_0001ENSDARG00000001835ENSDART00000048469ENSDART00000060066ENSDART00000135022ENSDART00000142289ENSDART00000145204ENSDARG00000040985ENSDART00000060054ENSDART00000139584CIL_0004G3_0002ENSG00000102452ENST00000251127ENST00000376200ENST00000467264ENST00000470333ENST00000497170ENSG00000102466ENST00000376131ENST00000376143ENST00000418923ENST00000468052ENSG00000233009ENST00000457843CIL_0004G3_0003ENSMUSG00000000197ENSMUST00000000201ENSMUSG00000032925ENSMUST00000049681ENSMUST00000132026ENSMUST00000142161ENSMUSG00000082793ENSMUST00000119073
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G3_0001ENSDARG00000001835ENSDART00000048469ENSDART00000142289ENSDART00000145204ENSDARG00000040985ENSDART00000060054ENSDART00000139584CIL_0004G3_0002ENSG00000102452ENST00000251127ENST00000376200ENST00000470333ENSG00000102466ENST00000376131ENST00000376143ENST00000418923ENSG00000233009ENST00000457843CIL_0004G3_0003ENSMUSG00000000197ENSMUST00000000201ENSMUSG00000032925ENSMUST00000049681ENSMUST00000132026ENSMUST00000142161ENSMUSG00000082793ENSMUST00000119073
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001835 ENSDART00000048469 N/A N/A N/A 12.722±9.86 N/A N/A N/A 0.223±0.00 N/A N/A 0.888±0.00 N/A N/A N/A
ENSDART00000060066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142289 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A
ENSDART00000145204 N/A N/A N/A 8.518±1.24 N/A N/A 2.730±0.81 2.300±0.26 0.073±0.00 N/A 0.977±0.00 N/A N/A N/A
ENSDARG00000040985 ENSDART00000060054 N/A N/A N/A 7.480±2.70 N/A N/A 4.021±0.26 4.276±0.00 0.040±0.00 N/A 3.826±0.00 N/A N/A N/A
ENSDART00000139584 N/A N/A N/A 1.501±0.92 N/A N/A N/A N/A N/A N/A 6.292±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102452 ENST00000251127 0.048±0.00 0.269±0.00 N/A 7.886±0.11 0.145±0.05 0.140±0.12 0.410±0.20 0.157±0.01 0.114±0.06 0.311±0.00 0.005±0.00 0.236±0.09 0.677±0.02 0.439±0.00
ENST00000376200 0.184±0.00 0.373±0.00 N/A N/A 0.304±0.00 0.655±0.00 N/A 0.267±0.01 0.068±0.00 0.274±0.00 0.059±0.00 N/A N/A N/A
ENST00000467264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470333 N/A N/A N/A N/A N/A N/A 0.283±0.00 0.119±0.00 N/A N/A 0.125±0.00 N/A N/A N/A
ENST00000497170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102466 ENST00000376131 N/A N/A 0.070±0.00 2.879±0.06 1.133±0.00 0.202±0.14 N/A 0.050±0.00 0.199±0.08 N/A N/A 0.425±0.23 N/A N/A
ENST00000376143 N/A N/A N/A 11.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418923 N/A N/A N/A N/A N/A 1.233±0.00 N/A 1.361±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233009 ENST00000457843 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.145±0.12 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000197 ENSMUST00000000201 0.117±0.12 1.987±0.47 0.126±0.00 5.546±1.90 0.053±0.02 0.200±0.05 0.153±0.05 0.077±0.02 0.008±0.00 0.128±0.04 0.028±0.01 0.726±0.40 0.013±0.01 0.399±0.14
ENSMUSG00000032925 ENSMUST00000049681 0.809±0.18 1.202±0.15 2.826±0.05 N/A 0.967±0.27 0.211±0.05 1.701±0.08 0.155±0.09 0.086±0.04 1.210±0.42 0.906±0.25 1.167±0.59 0.379±0.33 1.912±0.69
ENSMUST00000132026 N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A 0.006±0.00 N/A 0.122±0.00 0.201±0.00 N/A N/A
ENSMUST00000142161 1.166±0.40 5.305±0.96 N/A N/A 1.835±1.15 0.119±0.07 1.604±0.78 0.328±0.21 0.060±0.05 3.520±1.02 0.201±0.03 3.646±0.96 0.074±0.00 1.750±0.21
ENSMUSG00000082793 ENSMUST00000119073 N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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