C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004GG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061165-ENSDARG00000025977 CGP 7955 15:27957909-28134396
GeneTranscriptPositionBiotype
ENSDARG00000025977 (blmh)
bleomycin hydrolase 		ENSDART00000060255 (blmh-001) 27983464-28026609 protein_coding
ENSDART00000152147 (blmh-002) 28023361-28134396 protein_coding
ENSDARG00000061165 (slc6a4a)
solute carrier family 6 (neurotransmitter transporter, serotonin), member 4A 		ENSDART00000086902 (slc6a4a-001) 27957909-27967386 protein_coding
ENSDART00000141436 (slc6a4a-002) 27965743-27966617 retained_intron
ENSDART00000152317 (slc6a4a-003) 27965608-27967125 retained_intron
CIL_0004GG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108576-ENSG00000108578 CGP 9606 17:30194319-30292056
GeneTranscriptPositionBiotype
ENSG00000108576 (SLC6A4)
solute carrier family 6 (neurotransmitter transporter), member 4 		ENST00000261707 (SLC6A4-201) 30194321-30235968 protein_coding
ENST00000394821 (SLC6A4-001) 30198495-30235698 protein_coding
ENST00000401766 (SLC6A4-002) 30194319-30236002 protein_coding
ENST00000578609 (SLC6A4-004) 30198476-30203682 retained_intron
ENST00000579221 (SLC6A4-003) 30197921-30211369 nonsense_mediated_decay
ENSG00000108578 (BLMH)
bleomycin hydrolase 		ENST00000261714 (BLMH-001) 30248195-30291994 protein_coding
ENST00000577290 (BLMH-008) 30289414-30291994 nonsense_mediated_decay
ENST00000577306 (BLMH-013) 30272258-30273130 retained_intron
ENST00000577623 (BLMH-006) 30266879-30291904 protein_coding
ENST00000578090 (BLMH-002) 30248822-30291849 nonsense_mediated_decay
ENST00000578795 (BLMH-003) 30248205-30250283 retained_intron
ENST00000579325 (BLMH-011) 30273765-30285539 retained_intron
ENST00000579957 (BLMH-004) 30266885-30271493 retained_intron
ENST00000580709 (BLMH-009) 30287824-30292042 protein_coding
ENST00000581037 (BLMH-005) 30271269-30287914 protein_coding
ENST00000582669 (BLMH-012) 30273278-30285506 processed_transcript
ENST00000582749 (BLMH-007) 30290990-30292056 retained_intron
ENST00000584603 (BLMH-010) 30272741-30291667 protein_coding
ENSG00000252112 (SNORD63)
Small nucleolar RNA SNORD63 		ENST00000516303 (SNORD63.1-203) 30246757-30246820 snoRNA
ENSG00000264125 (RP11-354P11.4)
 ENST00000581633 (RP11-354P11.4-001) 30204318-30206468 antisense
ENSG00000266120 (RP11-354P11.2)
 ENST00000577420 (RP11-354P11.2-001) 30238741-30252237 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GG_0001ENSDARG00000025977ENSDART00000060255ENSDART00000152147ENSDARG00000061165ENSDART00000086902ENSDART00000141436ENSDART00000152317CIL_0004GG_0002ENSG00000108576ENST00000261707ENST00000394821ENST00000401766ENST00000578609ENST00000579221ENSG00000108578ENST00000261714ENST00000577290ENST00000577306ENST00000577623ENST00000578090ENST00000578795ENST00000579325ENST00000579957ENST00000580709ENST00000581037ENST00000582669ENST00000582749ENST00000584603ENSG00000252112ENST00000516303ENSG00000264125ENST00000581633ENSG00000266120ENST00000577420
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GG_0001ENSDARG00000025977ENSDART00000060255ENSDART00000152147ENSDARG00000061165ENSDART00000086902CIL_0004GG_0002ENSG00000108576ENST00000261707ENST00000394821ENST00000401766ENST00000578609ENST00000579221ENSG00000108578ENST00000261714ENST00000577623ENST00000578090ENST00000578795ENST00000580709ENST00000581037ENST00000584603ENSG00000252112ENST00000516303ENSG00000264125ENST00000581633ENSG00000266120ENST00000577420
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000025977 ENSDART00000060255 N/A N/A N/A 7.141±4.54 N/A N/A 13.110±1.67 8.955±0.00 2.865±0.00 N/A 8.978±0.00 N/A N/A N/A
ENSDART00000152147 N/A N/A N/A 0.640±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061165 ENSDART00000086902 N/A N/A N/A 2.351±0.07 N/A N/A 89.513±0.00 6.413±0.00 0.700±0.00 N/A 0.224±0.00 N/A N/A N/A
ENSDART00000141436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108576 ENST00000261707 0.121±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENST00000394821 N/A N/A 0.146±0.00 N/A N/A 0.162±0.00 0.082±0.00 0.143±0.00 0.136±0.00 6.635±4.13 0.086±0.00 0.355±0.32 10.744±4.12 0.282±0.06
ENST00000401766 N/A 0.171±0.00 N/A 0.051±0.00 0.090±0.00 0.025±0.00 0.024±0.00 0.046±0.04 0.040±0.02 3.196±1.92 0.051±0.00 0.148±0.04 3.061±0.79 N/A
ENST00000578609 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A
ENST00000579221 0.114±0.00 0.163±0.00 0.379±0.00 N/A 0.169±0.00 0.448±0.00 0.062±0.00 N/A N/A 9.104±7.17 0.134±0.00 0.445±0.00 9.624±1.69 0.216±0.00
ENSG00000108578 ENST00000261714 9.616±0.00 7.375±0.00 0.483±0.00 3.117±0.00 1.642±0.00 4.725±3.79 1.739±1.57 7.549±0.00 2.581±1.45 7.460±0.00 2.108±0.00 11.721±4.95 12.782±2.10 8.944±2.22
ENST00000577290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577623 N/A N/A N/A N/A 0.864±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578090 N/A N/A N/A N/A N/A N/A 0.914±0.00 N/A N/A 1.698±1.01 1.919±0.00 N/A N/A N/A
ENST00000578795 N/A N/A 0.782±0.00 N/A N/A N/A N/A N/A N/A 0.648±0.00 N/A N/A N/A N/A
ENST00000579325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580709 N/A N/A 2.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.219±0.00 17.059±0.00 10.923±0.00
ENST00000582669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584603 N/A N/A N/A N/A N/A N/A N/A N/A 0.640±0.00 1.179±0.00 N/A N/A N/A N/A
ENSG00000252112 ENST00000516303 N/A N/A N/A N/A N/A N/A N/A 1.056±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000264125 ENST00000581633 0.219±0.00 0.374±0.00 N/A 0.128±0.00 0.020±0.00 N/A 0.076±0.00 0.062±0.00 0.036±0.00 0.154±0.14 0.236±0.00 0.028±0.00 N/A 0.079±0.05
ENSG00000266120 ENST00000577420 N/A N/A N/A N/A N/A 4.393±0.00 N/A 1.063±0.00 N/A N/A N/A N/A 0.351±0.00 0.077±0.00

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