C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004H3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062965-ENSDARG00000069832 CGP 7955 13:9184551-9207163
GeneTranscriptPositionBiotype
ENSDARG00000062965 (fam45a)
family with sequence similarity 45, member A 		ENSDART00000091595 (fam45a-001) 9184551-9195795 protein_coding
ENSDARG00000069832 (sfxn4)
sideroflexin 4 		ENSDART00000101949 (sfxn4-001) 9195928-9207163 protein_coding
CIL_0004H3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119979-ENSG00000183605 CGP 9606 10:119104086-119165667
GeneTranscriptPositionBiotype
ENSG00000119979 (FAM45A)
family with sequence similarity 45, member A 		ENST00000361432 (FAM45A-001) 119104117-119137195 protein_coding
ENST00000448258 (FAM45A-011) 119104117-119129546 processed_transcript
ENST00000462327 (FAM45A-005) 119129475-119135180 processed_transcript
ENST00000472379 (FAM45A-007) 119104086-119105635 retained_intron
ENST00000487888 (FAM45A-010) 119104104-119129612 processed_transcript
ENST00000489936 (FAM45A-002) 119136517-119137174 processed_transcript
ENST00000489988 (FAM45A-003) 119114105-119137984 processed_transcript
ENST00000493766 (FAM45A-009) 119104095-119111928 processed_transcript
ENST00000497903 (FAM45A-006) 119104092-119108096 processed_transcript
ENST00000498549 (FAM45A-004) 119120382-119137180 processed_transcript
ENST00000535029 (FAM45A-201) 119104099-119137703 protein_coding
ENSG00000183605 (SFXN4)
sideroflexin 4 		ENST00000355697 (SFXN4-001) 119140913-119165667 protein_coding
ENST00000369131 (SFXN4-004) 119146290-119165563 protein_coding
ENST00000419372 (SFXN4-005) 119157669-119165542 protein_coding
ENST00000461438 (SFXN4-002) 119141256-119165654 processed_transcript
ENST00000462913 (SFXN4-003) 119158007-119164196 processed_transcript
ENST00000466218 (SFXN4-006) 119147778-119165623 processed_transcript
ENST00000484960 (SFXN4-008) 119140913-119155123 processed_transcript
ENST00000490417 (SFXN4-007) 119140767-119156756 retained_intron
CIL_0004H3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024993-ENSMUSG00000063698 CGP 10090 19:60811585-60861479
GeneTranscriptPositionBiotype
ENSMUSG00000024993 (Fam45a)
family with sequence similarity 45, member A 		ENSMUST00000025957 (Fam45a-001) 60811611-60836227 protein_coding
ENSMUST00000119633 (Fam45a-002) 60811591-60836227 protein_coding
ENSMUST00000128357 (Fam45a-004) 60811585-60830864 protein_coding
ENSMUST00000136146 (Fam45a-006) 60812040-60814761 processed_transcript
ENSMUST00000142375 (Fam45a-007) 60830552-60835113 retained_intron
ENSMUST00000147049 (Fam45a-003) 60811596-60818439 retained_intron
ENSMUST00000148577 (Fam45a-005) 60811611-60822406 nonsense_mediated_decay
ENSMUSG00000063698 (Sfxn4)
sideroflexin 4 		ENSMUST00000080806 (Sfxn4-002) 60837277-60861427 nonsense_mediated_decay
ENSMUST00000124921 (Sfxn4-003) 60838758-60861424 nonsense_mediated_decay
ENSMUST00000135808 (Sfxn4-001) 60838748-60861479 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004H3_0001ENSDARG00000062965ENSDART00000091595ENSDARG00000069832ENSDART00000101949CIL_0004H3_0002ENSG00000119979ENST00000361432ENST00000448258ENST00000462327ENST00000472379ENST00000487888ENST00000489936ENST00000489988ENST00000493766ENST00000497903ENST00000498549ENST00000535029ENSG00000183605ENST00000355697ENST00000369131ENST00000419372ENST00000461438ENST00000462913ENST00000466218ENST00000484960ENST00000490417CIL_0004H3_0003ENSMUSG00000024993ENSMUST00000025957ENSMUST00000119633ENSMUST00000128357ENSMUST00000136146ENSMUST00000142375ENSMUST00000147049ENSMUST00000148577ENSMUSG00000063698ENSMUST00000080806ENSMUST00000124921ENSMUST00000135808
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004H3_0001ENSDARG00000062965ENSDART00000091595ENSDARG00000069832ENSDART00000101949CIL_0004H3_0002ENSG00000119979ENST00000361432ENST00000462327ENST00000487888ENST00000489988ENST00000498549ENST00000535029ENSG00000183605ENST00000355697ENST00000369131ENST00000461438ENST00000466218ENST00000484960ENST00000490417CIL_0004H3_0003ENSMUSG00000024993ENSMUST00000025957ENSMUST00000119633ENSMUST00000128357ENSMUST00000142375ENSMUST00000148577ENSMUSG00000063698ENSMUST00000080806ENSMUST00000124921ENSMUST00000135808
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062965 ENSDART00000091595 N/A N/A N/A 4.421±0.78 N/A N/A 4.158±2.29 4.005±0.83 0.381±0.00 N/A 0.661±0.00 N/A N/A N/A
ENSDARG00000069832 ENSDART00000101949 N/A N/A N/A 8.651±2.25 N/A N/A 8.014±5.82 2.242±1.74 0.438±0.00 N/A 6.059±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119979 ENST00000361432 N/A N/A 1.527±0.00 4.495±0.00 2.880±0.00 2.018±0.00 0.644±0.00 1.919±0.00 2.243±0.00 0.311±0.00 0.585±0.00 3.777±0.00 N/A N/A
ENST00000448258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462327 N/A 1.308±0.00 N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 0.811±0.00 N/A N/A N/A
ENST00000472379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487888 N/A N/A N/A N/A N/A N/A N/A N/A 1.549±0.00 0.871±0.00 N/A 6.047±0.00 4.092±0.00 2.302±0.00
ENST00000489936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489988 N/A N/A 1.414±0.00 0.826±0.00 0.920±0.00 N/A N/A 0.981±0.17 0.866±0.00 N/A 0.672±0.00 3.261±1.49 N/A N/A
ENST00000493766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498549 N/A N/A N/A N/A 7.612±0.00 9.134±0.00 N/A N/A N/A 2.132±0.00 N/A N/A N/A N/A
ENST00000535029 3.418±0.00 2.361±0.00 N/A 1.486±0.30 3.251±0.00 1.194±0.24 1.368±0.00 2.704±1.65 2.809±0.00 1.547±1.31 2.812±0.00 3.346±0.98 3.157±0.37 1.530±0.57
ENSG00000183605 ENST00000355697 2.636±0.00 2.623±0.00 1.058±0.00 3.306±0.44 1.717±0.57 N/A 5.257±4.45 4.282±2.56 5.684±5.03 2.704±0.00 11.779±10.07 14.446±5.23 6.165±1.76 5.760±1.00
ENST00000369131 N/A N/A N/A N/A N/A 1.363±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.089±0.00 N/A N/A
ENST00000462913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466218 N/A N/A N/A N/A N/A N/A N/A 6.717±0.00 0.834±0.00 N/A N/A 2.088±0.00 N/A N/A
ENST00000484960 2.930±0.00 5.355±0.00 N/A 3.114±0.00 3.841±0.00 5.398±0.00 N/A 8.928±0.00 3.887±2.16 N/A 5.606±2.56 15.654±0.00 N/A 6.177±0.07
ENST00000490417 N/A N/A N/A N/A N/A 2.269±0.00 N/A N/A N/A 0.257±0.00 N/A 15.100±0.00 2.416±1.29 5.058±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024993 ENSMUST00000025957 N/A 1.790±0.49 5.042±3.17 4.198±1.95 2.491±0.00 N/A N/A 1.276±0.47 8.213±1.66 N/A 1.240±0.38 3.945±2.30 8.580±4.15 7.966±2.23
ENSMUST00000119633 N/A N/A 3.148±0.65 4.988±0.16 2.833±1.44 1.154±0.00 0.509±0.00 N/A 2.613±0.63 1.760±0.40 0.354±0.06 3.303±1.62 N/A 7.942±3.18
ENSMUST00000128357 4.359±0.00 2.659±0.94 N/A 5.307±0.00 2.876±0.85 4.157±1.53 2.950±0.79 5.082±1.03 2.537±0.64 7.621±0.92 N/A 4.356±0.92 8.316±2.17 13.271±0.22
ENSMUST00000136146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142375 5.909±1.51 1.013±0.11 N/A 9.335±0.00 2.699±1.20 1.505±0.00 N/A N/A N/A N/A N/A 3.165±1.59 6.173±0.00 15.929±0.00
ENSMUST00000147049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148577 N/A N/A N/A N/A N/A N/A N/A 6.586±0.16 3.882±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000063698 ENSMUST00000080806 N/A 0.479±0.28 0.868±0.00 1.057±0.19 0.184±0.00 0.198±0.03 N/A N/A 0.175±0.09 N/A 0.133±0.02 0.936±0.44 0.102±0.00 0.082±0.00
ENSMUST00000124921 N/A N/A N/A N/A N/A 0.256±0.00 0.323±0.00 N/A 0.322±0.04 N/A N/A 0.820±0.30 0.138±0.00 0.356±0.00
ENSMUST00000135808 2.583±1.07 0.864±0.27 2.532±0.65 2.216±0.34 0.938±0.20 0.219±0.09 1.564±0.08 1.549±0.25 0.539±0.09 1.418±0.32 0.643±0.22 1.173±0.61 1.276±0.54 0.421±0.21

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