C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004I9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052713-ENSDARG00000052712 CGP 7955 1:43159073-44067104
GeneTranscriptPositionBiotype
ENSDARG00000024785 (ctnna2)
catenin (cadherin-associated protein), alpha 2 		ENSDART00000101306 (ctnna2-002) 42607716-43418249 protein_coding
ENSDART00000110860 (ctnna2-201) 42662236-43042727 protein_coding
ENSDART00000137609 (ctnna2-004) 42845818-43265577 processed_transcript
ENSDART00000138740 (ctnna2-001) 42607580-43265577 protein_coding
ENSDART00000143871 (ctnna2-003) 42728052-42773740 protein_coding
ENSDART00000148371 (ctnna2-005) 43232718-43418160 processed_transcript
ENSDART00000153506 (ctnna2-202) 43362431-43417599 protein_coding
ENSDARG00000052712 (suclg1)
succinate-CoA ligase, GDP-forming, alpha subunit 		ENSDART00000074609 (suclg1-001) 44035000-44067104 protein_coding
ENSDART00000147946 (suclg1-002) 44055189-44067103 retained_intron
ENSDARG00000052713 (lrrtm1)
leucine rich repeat transmembrane neuronal 1 		ENSDART00000074618 (lrrtm1-201) 43159462-43161030 protein_coding
ENSDART00000133917 (lrrtm1-001) 43159073-43161595 protein_coding
CIL_0004I9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162951-ENSG00000163541 CGP 9606 2:80288351-84460045
GeneTranscriptPositionBiotype
ENSG00000066032 (CTNNA2)
catenin (cadherin-associated protein), alpha 2 		ENST00000343114 (CTNNA2-004) 80313379-80648780 protein_coding
ENST00000361291 (CTNNA2-201) 80313379-80648861 protein_coding
ENST00000402739 (CTNNA2-003) 79651552-80648689 protein_coding
ENST00000409266 (CTNNA2-005) 79634541-79687729 protein_coding
ENST00000409550 (CTNNA2-015) 80328275-80555728 protein_coding
ENST00000409971 (CTNNA2-007) 79514622-79858066 protein_coding
ENST00000451966 (CTNNA2-006) 79513034-79744483 protein_coding
ENST00000465616 (CTNNA2-009) 80378687-80546054 processed_transcript
ENST00000466387 (CTNNA2-002) 79185231-80648779 protein_coding
ENST00000467488 (CTNNA2-012) 79292976-79319893 retained_intron
ENST00000467892 (CTNNA2-010) 80589339-80608489 retained_intron
ENST00000493024 (CTNNA2-014) 80305118-80545986 processed_transcript
ENST00000496251 (CTNNA2-011) 79281464-79340163 processed_transcript
ENST00000496558 (CTNNA2-001) 79513000-80648780 protein_coding
ENST00000497804 (CTNNA2-013) 79312710-79340171 processed_transcript
ENST00000508970 (CTNNA2-020) 79697846-79777101 processed_transcript
ENST00000540488 (CTNNA2-202) 80313379-80648861 protein_coding
ENST00000541047 (CTNNA2-203) 80305105-80648861 protein_coding
ENSG00000162951 (LRRTM1)
leucine rich repeat transmembrane neuronal 1 		ENST00000295057 (LRRTM1-002) 80301878-80304749 protein_coding
ENST00000409148 (LRRTM1-007) 80301880-80304274 protein_coding
ENST00000415098 (LRRTM1-003) 80303493-80304321 protein_coding
ENST00000416268 (LRRTM1-004) 80303151-80304595 protein_coding
ENST00000417012 (LRRTM1-001) 80288351-80304393 nonsense_mediated_decay
ENST00000433224 (LRRTM1-006) 80298181-80304730 nonsense_mediated_decay
ENST00000452811 (LRRTM1-005) 80303269-80304440 protein_coding
ENSG00000163541 (SUCLG1)
succinate-CoA ligase, alpha subunit 		ENST00000393868 (SUCLG1-001) 84423523-84459480 protein_coding
ENST00000430989 (SUCLG1-006) 84441247-84459246 processed_transcript
ENST00000442240 (SUCLG1-005) 84441079-84459261 nonsense_mediated_decay
ENST00000483605 (SUCLG1-004) 84441060-84459236 processed_transcript
ENST00000484365 (SUCLG1-002) 84423530-84426936 retained_intron
ENST00000487809 (SUCLG1-009) 84425414-84433771 retained_intron
ENST00000488234 (SUCLG1-007) 84433207-84441092 processed_transcript
ENST00000491123 (SUCLG1-008) 84423560-84432836 processed_transcript
ENST00000491642 (SUCLG1-003) 84441233-84460045 processed_transcript
ENSG00000168129 (AC098817.5)
 ENST00000455595 (AC098817.5-001) 82856826-82857384 processed_pseudogene
ENSG00000182814 (FUNDC2P2)
FUN14 domain containing 2 pseudogene 2 		ENST00000331369 (FUNDC2P2-001) 84290683-84292202 processed_transcript
ENST00000443452 (FUNDC2P2-002) 84290777-84291269 transcribed_processed_pseudogene
ENSG00000223700 (AC104395.1)
 ENST00000431592 (AC104395.1-001) 83877727-83878553 processed_pseudogene
ENSG00000223977 (AC138623.1)
 ENST00000418060 (AC138623.1-001) 83218890-83219105 processed_pseudogene
ENSG00000224627 (RPL37P10)
ribosomal protein L37 pseudogene 10 		ENST00000412884 (RPL37P10-001) 83594956-83595243 processed_pseudogene
ENSG00000224695 (MTND6P7)
MT-ND6 pseudogene 7 		ENST00000433237 (MTND6P7-001) 82817538-82818061 processed_pseudogene
ENSG00000225045 (MTND5P27)
MT-ND5 pseudogene 27 		ENST00000428871 (MTND5P27-001) 82815809-82817528 processed_pseudogene
ENSG00000226700 (MTND4P25)
MT-ND4 pseudogene 25 		ENST00000441039 (MTND4P25-001) 82814984-82815516 processed_pseudogene
ENSG00000227789 (AC098817.3)
 ENST00000419540 (AC098817.3-001) 82818131-82819264 processed_pseudogene
ENSG00000228225 (AC016908.1)
 ENST00000442571 (AC016908.1-001) 84031140-84032358 processed_pseudogene
ENSG00000228272 (AC106874.1)
 ENST00000440495 (AC106874.1-001) 84315108-84350774 lincRNA
ENSG00000229560 (LYARP1)
Ly1 antibody reactive pseudogene 1 		ENST00000436977 (LYARP1-001) 82268427-82269927 processed_pseudogene
ENSG00000231781 (AC079896.1)
 ENST00000455845 (AC079896.1-001) 81983272-82005700 lincRNA
ENSG00000232548 (AC010744.1)
 ENST00000448431 (AC010744.1-001) 83522814-83523502 lincRNA
ENSG00000233444 (AC013262.1)
 ENST00000426710 (AC013262.1-001) 81666477-81666728 processed_pseudogene
ENSG00000234429 (AC105342.1)
 ENST00000378334 (AC105342.1-001) 81194337-81201184 processed_pseudogene
ENSG00000235519 (AC012075.2)
 ENST00000446580 (AC012075.2-001) 81462695-81466946 lincRNA
ENSG00000236198 (AC104395.2)
 ENST00000454818 (AC104395.2-001) 83874708-83876333 processed_pseudogene
ENSG00000242118 (RN7SL201P)
RNA, 7SL, cytoplasmic 201, pseudogene 		ENST00000482306 (RN7SL201P-201) 81967079-81967374 misc_RNA
ENSG00000278669 (AC106874.2)
 ENST00000618228 (AC106874.2-201) 84374002-84374093 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I9_0001ENSDARG00000024785ENSDART00000101306ENSDART00000110860ENSDART00000137609ENSDART00000138740ENSDART00000143871ENSDART00000148371ENSDART00000153506ENSDARG00000052712ENSDART00000074609ENSDART00000147946ENSDARG00000052713ENSDART00000074618ENSDART00000133917CIL_0004I9_0002ENSG00000066032ENST00000343114ENST00000361291ENST00000402739ENST00000409266ENST00000409550ENST00000409971ENST00000451966ENST00000465616ENST00000466387ENST00000467488ENST00000467892ENST00000493024ENST00000496251ENST00000496558ENST00000497804ENST00000508970ENST00000540488ENST00000541047ENSG00000162951ENST00000295057ENST00000409148ENST00000415098ENST00000416268ENST00000417012ENST00000433224ENST00000452811ENSG00000163541ENST00000393868ENST00000430989ENST00000442240ENST00000483605ENST00000484365ENST00000487809ENST00000488234ENST00000491123ENST00000491642ENSG00000168129ENST00000455595ENSG00000182814ENST00000331369ENST00000443452ENSG00000223700ENST00000431592ENSG00000223977ENST00000418060ENSG00000224627ENST00000412884ENSG00000224695ENST00000433237ENSG00000225045ENST00000428871ENSG00000226700ENST00000441039ENSG00000227789ENST00000419540ENSG00000228225ENST00000442571ENSG00000228272ENST00000440495ENSG00000229560ENST00000436977ENSG00000231781ENST00000455845ENSG00000232548ENST00000448431ENSG00000233444ENST00000426710ENSG00000234429ENST00000378334ENSG00000235519ENST00000446580ENSG00000236198ENST00000454818ENSG00000242118ENST00000482306ENSG00000278669ENST00000618228
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I9_0001ENSDARG00000024785ENSDART00000101306ENSDART00000148371ENSDART00000153506ENSDARG00000052712ENSDART00000074609ENSDARG00000052713ENSDART00000074618ENSDART00000133917CIL_0004I9_0002ENSG00000066032ENST00000343114ENST00000402739ENST00000466387ENST00000467892ENST00000496558ENST00000508970ENST00000540488ENST00000541047ENSG00000162951ENST00000295057ENST00000409148ENST00000415098ENST00000416268ENST00000417012ENST00000433224ENST00000452811ENSG00000163541ENST00000393868ENST00000430989ENSG00000168129ENST00000455595ENSG00000182814ENST00000331369ENST00000443452ENSG00000223700ENST00000431592ENSG00000223977ENST00000418060ENSG00000224627ENST00000412884ENSG00000224695ENST00000433237ENSG00000225045ENST00000428871ENSG00000226700ENST00000441039ENSG00000227789ENST00000419540ENSG00000228225ENST00000442571ENSG00000228272ENST00000440495ENSG00000229560ENST00000436977ENSG00000231781ENST00000455845ENSG00000232548ENST00000448431ENSG00000233444ENST00000426710ENSG00000234429ENST00000378334ENSG00000235519ENST00000446580ENSG00000236198ENST00000454818ENSG00000242118ENST00000482306ENSG00000278669ENST00000618228
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024785 ENSDART00000101306 N/A N/A N/A 4.647±0.00 N/A N/A 0.524±0.06 0.555±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000110860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148371 N/A N/A N/A N/A N/A N/A 2.721±0.00 N/A 0.235±0.00 N/A N/A N/A N/A N/A
ENSDART00000153506 N/A N/A N/A N/A N/A N/A 0.595±0.13 N/A N/A N/A 1.706±0.00 N/A N/A N/A
ENSDARG00000052712 ENSDART00000074609 N/A N/A N/A 22.384±19.83 N/A N/A 79.312±67.05 16.374±11.25 60.353±0.00 N/A 120.576±0.00 N/A N/A N/A
ENSDART00000147946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000052713 ENSDART00000074618 N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133917 N/A N/A N/A 11.827±0.00 N/A N/A 0.089±0.00 0.656±0.00 0.055±0.00 N/A 1.391±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066032 ENST00000343114 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 0.012±0.00 N/A N/A N/A 0.001±0.00 N/A
ENST00000361291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402739 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A 0.111±0.00 N/A N/A N/A N/A 1.871±0.30
ENST00000409266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466387 N/A N/A N/A N/A 0.037±0.00 N/A 0.012±0.00 0.033±0.00 N/A 0.021±0.00 N/A 0.044±0.00 N/A 1.440±0.00
ENST00000467488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A
ENST00000493024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496558 N/A N/A N/A 34.880±8.81 N/A 0.762±0.65 N/A N/A 0.069±0.00 N/A N/A 0.043±0.00 N/A 3.963±0.00
ENST00000497804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508970 N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.016±0.01 N/A
ENST00000541047 N/A N/A 0.016±0.00 12.095±0.00 N/A N/A 0.005±0.00 N/A N/A N/A N/A 0.080±0.04 0.004±0.00 N/A
ENSG00000162951 ENST00000295057 N/A N/A N/A 1.193±0.12 0.077±0.00 N/A 0.022±0.00 N/A N/A N/A N/A 0.158±0.09 N/A 0.287±0.01
ENST00000409148 N/A 0.145±0.00 0.237±0.00 1.495±0.00 0.338±0.00 0.568±0.00 0.062±0.04 0.173±0.00 0.038±0.01 0.166±0.00 0.081±0.00 0.490±0.00 N/A 0.186±0.00
ENST00000415098 N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416268 N/A N/A N/A N/A 0.998±0.00 N/A N/A N/A 0.258±0.00 N/A N/A 0.188±0.00 N/A 0.534±0.00
ENST00000417012 N/A N/A N/A 2.795±0.00 N/A 0.111±0.00 N/A N/A N/A N/A N/A 0.170±0.00 N/A 0.129±0.00
ENST00000433224 N/A N/A N/A 0.803±0.00 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452811 0.176±0.00 N/A N/A 3.332±0.00 N/A 0.617±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163541 ENST00000393868 29.392±0.00 25.132±0.00 26.407±0.00 19.520±10.77 36.364±31.11 32.880±8.80 58.327±40.33 35.128±23.07 26.210±18.59 20.603±0.00 28.768±6.91 34.927±17.53 38.290±6.45 31.957±3.52
ENST00000430989 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.985±0.00 N/A N/A N/A N/A
ENST00000442240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168129 ENST00000455595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00
ENSG00000182814 ENST00000331369 N/A 0.024±0.00 N/A 0.013±0.00 N/A 0.033±0.00 0.022±0.00 0.024±0.00 N/A 0.094±0.00 N/A N/A N/A 4.231±1.37
ENST00000443452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.188±0.00
ENSG00000223700 ENST00000431592 N/A 0.548±0.00 N/A 0.803±0.00 0.344±0.00 0.215±0.00 0.135±0.00 N/A 0.096±0.00 0.196±0.00 N/A 0.315±0.27 N/A 0.264±0.20
ENSG00000223977 ENST00000418060 N/A N/A N/A N/A N/A N/A N/A 15.680±0.00 N/A N/A N/A N/A 0.313±0.00 N/A
ENSG00000224627 ENST00000412884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
ENSG00000224695 ENST00000433237 N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A 0.042±0.00
ENSG00000225045 ENST00000428871 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A 0.434±0.43
ENSG00000226700 ENST00000441039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00
ENSG00000227789 ENST00000419540 N/A N/A N/A 0.011±0.00 N/A 0.066±0.00 N/A N/A N/A 0.732±0.00 N/A N/A N/A 0.712±0.65
ENSG00000228225 ENST00000442571 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228272 ENST00000440495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00
ENSG00000229560 ENST00000436977 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00
ENSG00000231781 ENST00000455845 N/A 0.077±0.00 N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232548 ENST00000448431 N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233444 ENST00000426710 N/A 0.068±0.00 N/A N/A N/A 0.066±0.00 N/A 0.280±0.00 N/A N/A N/A N/A N/A 0.063±0.00
ENSG00000234429 ENST00000378334 0.002±0.00 N/A N/A N/A 0.003±0.00 0.002±0.00 0.009±0.01 N/A N/A N/A N/A 0.002±0.00 N/A 0.023±0.02
ENSG00000235519 ENST00000446580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.617±1.91
ENSG00000236198 ENST00000454818 0.010±0.00 0.136±0.00 N/A 0.086±0.00 0.067±0.01 0.083±0.00 0.099±0.00 0.039±0.00 N/A N/A N/A 0.100±0.08 N/A 0.074±0.04
ENSG00000242118 ENST00000482306 N/A 0.148±0.00 N/A 0.155±0.00 0.248±0.00 0.091±0.00 N/A N/A N/A 0.046±0.00 N/A 1.231±0.00 N/A 0.270±0.00
ENSG00000278669 ENST00000618228 N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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