C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135720-ENSG00000249961 CGP 9606 16:66720893-66801620
GeneTranscriptPositionBiotype
ENSG00000135720 (DYNC1LI2)
dynein, cytoplasmic 1, light intermediate chain 2 		ENST00000258198 (DYNC1LI2-001) 66720893-66751798 protein_coding
ENST00000440564 (DYNC1LI2-004) 66732009-66751594 protein_coding
ENST00000443351 (DYNC1LI2-003) 66723478-66751601 protein_coding
ENST00000561727 (DYNC1LI2-010) 66733973-66736237 retained_intron
ENST00000563628 (DYNC1LI2-016) 66723570-66729099 protein_coding
ENST00000564090 (DYNC1LI2-011) 66742451-66751601 nonsense_mediated_decay
ENST00000564559 (DYNC1LI2-008) 66723601-66728219 nonsense_mediated_decay
ENST00000564833 (DYNC1LI2-006) 66725849-66732637 retained_intron
ENST00000565532 (DYNC1LI2-015) 66727997-66736197 retained_intron
ENST00000566150 (DYNC1LI2-013) 66736102-66751601 protein_coding
ENST00000567499 (DYNC1LI2-002) 66723601-66733546 retained_intron
ENST00000568180 (DYNC1LI2-012) 66736168-66751601 nonsense_mediated_decay
ENST00000568453 (DYNC1LI2-007) 66723606-66730348 retained_intron
ENST00000569320 (DYNC1LI2-014) 66723585-66730219 protein_coding
ENST00000570201 (DYNC1LI2-009) 66729040-66731034 processed_transcript
ENSG00000249961 (CCDC79)
coiled-coil domain containing 79 		ENST00000313294 (CCDC79-001) 66758299-66801620 nonsense_mediated_decay
ENST00000433154 (CCDC79-201) 66754976-66801620 protein_coding
ENST00000558713 (CCDC79-003) 66754976-66801611 protein_coding
ENST00000559050 (CCDC79-005) 66788239-66801584 protein_coding
ENST00000559403 (CCDC79-002) 66758304-66759208 protein_coding
ENST00000561333 (CCDC79-004) 66767428-66801026 processed_transcript
ENSG00000260465 (RP11-63M22.2)
 ENST00000569274 (RP11-63M22.2-001) 66720897-66731785 antisense
ENSG00000260558 (RP11-63M22.1)
 ENST00000565082 (RP11-63M22.1-001) 66738263-66739326 lincRNA
CIL_0004IU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035770-ENSMUSG00000052616 CGP 10090 8:104417674-104509910
GeneTranscriptPositionBiotype
ENSMUSG00000035770 (Dync1li2)
dynein, cytoplasmic 1 light intermediate chain 2 		ENSMUST00000041769 (Dync1li2-201) 104417674-104443047 protein_coding
ENSMUSG00000052616 (Ccdc79)
coiled-coil domain containing 79 		ENSMUST00000064576 (Ccdc79-001) 104446719-104509887 protein_coding
ENSMUST00000159713 (Ccdc79-004) 104447038-104509882 nonsense_mediated_decay
ENSMUST00000161520 (Ccdc79-003) 104447037-104509883 nonsense_mediated_decay
ENSMUST00000162014 (Ccdc79-002) 104447762-104509910 protein_coding
ENSMUSG00000077633 (Gm22148)
predicted gene, 22148 		ENSMUST00000104445 (Gm22148-201) 104507902-104508008 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IU_0001ENSG00000135720ENST00000258198ENST00000440564ENST00000443351ENST00000561727ENST00000563628ENST00000564090ENST00000564559ENST00000564833ENST00000565532ENST00000566150ENST00000567499ENST00000568180ENST00000568453ENST00000569320ENST00000570201ENSG00000249961ENST00000313294ENST00000433154ENST00000558713ENST00000559050ENST00000559403ENST00000561333ENSG00000260465ENST00000569274ENSG00000260558ENST00000565082CIL_0004IU_0002ENSMUSG00000035770ENSMUST00000041769ENSMUSG00000052616ENSMUST00000064576ENSMUST00000159713ENSMUST00000161520ENSMUST00000162014ENSMUSG00000077633ENSMUST00000104445
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IU_0001ENSG00000135720ENST00000258198ENST00000440564ENST00000443351ENST00000567499ENSG00000249961ENST00000313294ENST00000433154ENST00000558713ENST00000559050ENST00000559403ENST00000561333ENSG00000260465ENST00000569274ENSG00000260558ENST00000565082CIL_0004IU_0002ENSMUSG00000035770ENSMUST00000041769ENSMUSG00000052616ENSMUST00000064576ENSMUST00000159713ENSMUST00000161520ENSMUST00000162014ENSMUSG00000077633ENSMUST00000104445
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135720 ENST00000258198 N/A N/A 9.442±0.00 15.666±0.00 N/A 10.179±0.00 3.376±0.00 1.947±0.00 22.726±0.00 9.886±0.00 3.001±0.00 4.901±2.21 9.877±0.08 16.439±0.00
ENST00000440564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.064±0.00 N/A N/A N/A
ENST00000443351 N/A N/A N/A N/A N/A 10.217±0.00 N/A N/A N/A 6.555±0.00 N/A N/A N/A N/A
ENST00000561727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567499 N/A N/A N/A N/A 5.633±0.00 3.817±0.00 N/A 0.934±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249961 ENST00000313294 0.016±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.354±0.00
ENST00000433154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.892±0.00
ENST00000558713 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.020±0.00 N/A 2.076±0.10
ENST00000559050 N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559403 0.262±0.00 0.939±0.00 N/A 0.258±0.00 0.351±0.03 0.331±0.00 0.084±0.00 0.988±0.42 0.060±0.00 0.084±0.00 0.243±0.02 0.161±0.08 0.198±0.00 N/A
ENST00000561333 0.020±0.00 0.143±0.00 N/A 0.069±0.00 0.025±0.01 0.031±0.00 0.055±0.00 0.044±0.00 0.039±0.00 0.017±0.00 0.009±0.00 0.020±0.00 N/A 0.946±0.00
ENSG00000260465 ENST00000569274 35.055±0.00 29.855±0.00 N/A 35.023±18.34 41.399±0.00 28.869±19.82 10.026±5.81 16.528±13.40 4.798±0.00 14.851±6.26 10.311±0.00 15.269±4.27 11.523±0.37 26.394±2.59
ENSG00000260558 ENST00000565082 0.214±0.00 0.214±0.00 0.526±0.00 0.558±0.00 0.216±0.12 0.022±0.00 0.174±0.00 0.046±0.00 0.093±0.00 0.390±0.08 0.053±0.01 0.031±0.00 N/A 0.084±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035770 ENSMUST00000041769 15.301±1.30 8.589±1.29 36.554±1.80 27.218±11.26 7.970±1.84 8.703±2.83 11.576±0.82 9.485±1.63 6.048±2.99 18.194±3.50 15.363±1.48 9.349±7.41 10.649±4.36 20.112±5.46
ENSMUSG00000052616 ENSMUST00000064576 N/A N/A N/A N/A N/A 0.090±0.02 N/A 0.019±0.00 0.012±0.00 0.055±0.00 N/A 0.213±0.20 0.029±0.00 1.114±0.37
ENSMUST00000159713 0.020±0.00 0.072±0.03 N/A N/A 0.233±0.01 0.040±0.00 0.016±0.00 0.061±0.03 N/A 0.059±0.01 0.014±0.00 0.199±0.12 0.078±0.05 1.468±0.25
ENSMUST00000161520 N/A N/A 0.045±0.00 N/A N/A N/A 0.012±0.00 0.024±0.01 0.034±0.01 N/A 0.015±0.01 N/A 0.044±0.00 N/A
ENSMUST00000162014 0.015±0.00 N/A N/A 0.030±0.00 0.086±0.06 0.085±0.00 N/A 0.078±0.00 0.012±0.00 0.163±0.00 0.010±0.00 0.148±0.07 0.153±0.09 3.580±2.38
ENSMUSG00000077633 ENSMUST00000104445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.904±0.00

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