C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004J9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110315-ENSG00000133800 CGP 9606 11:10511678-10611689
GeneTranscriptPositionBiotype
ENSG00000072952 (MRVI1)
murine retrovirus integration site 1 homolog 		ENST00000423302 (MRVI1-001) 10573095-10693752 protein_coding
ENST00000424001 (MRVI1-201) 10573091-10652185 protein_coding
ENST00000526414 (MRVI1-003) 10581906-10693522 nonsense_mediated_decay
ENST00000527509 (MRVI1-014) 10576306-10693576 protein_coding
ENST00000529068 (MRVI1-009) 10633968-10693586 nonsense_mediated_decay
ENST00000529448 (MRVI1-004) 10576324-10693614 nonsense_mediated_decay
ENST00000529471 (MRVI1-012) 10591576-10594023 retained_intron
ENST00000529547 (MRVI1-008) 10632028-10693514 protein_coding
ENST00000531107 (MRVI1-002) 10576224-10652286 protein_coding
ENST00000531308 (MRVI1-007) 10652104-10693622 nonsense_mediated_decay
ENST00000531786 (MRVI1-006) 10632032-10693804 processed_transcript
ENST00000532037 (MRVI1-011) 10629685-10693957 processed_transcript
ENST00000533631 (MRVI1-010) 10609761-10633984 nonsense_mediated_decay
ENST00000534266 (MRVI1-005) 10576324-10652376 protein_coding
ENST00000541483 (MRVI1-013) 10576005-10693622 protein_coding
ENST00000547195 (MRVI1-202) 10573091-10693988 protein_coding
ENST00000558540 (MRVI1-015) 10575760-10693552 protein_coding
ENSG00000110315 (RNF141)
ring finger protein 141 		ENST00000265981 (RNF141-001) 10511678-10541217 protein_coding
ENST00000528665 (RNF141-002) 10518318-10541190 protein_coding
ENST00000530156 (RNF141-004) 10525192-10541230 nonsense_mediated_decay
ENST00000533412 (RNF141-005) 10519034-10540906 protein_coding
ENST00000534281 (RNF141-003) 10511923-10517740 retained_intron
ENSG00000133800 (LYVE1)
lymphatic vessel endothelial hyaluronan receptor 1 		ENST00000256178 (LYVE1-001) 10556966-10568691 protein_coding
ENST00000438354 (LYVE1-002) 10558363-10568718 nonsense_mediated_decay
ENST00000529598 (LYVE1-003) 10558877-10568577 protein_coding
ENST00000531706 (LYVE1-004) 10559816-10611689 processed_transcript
CIL_0004J9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030788-ENSMUSG00000030787 CGP 10090 7:110800432-110862953
GeneTranscriptPositionBiotype
ENSMUSG00000005686 (Ampd3)
adenosine monophosphate deaminase 3 		ENSMUST00000005829 (Ampd3-001) 110772604-110812405 protein_coding
ENSMUST00000106686 (Ampd3-002) 110772788-110794708 retained_intron
ENSMUST00000143786 (Ampd3-004) 110773672-110788799 protein_coding
ENSMUST00000147587 (Ampd3-005) 110774244-110788721 protein_coding
ENSMUST00000148292 (Ampd3-006) 110777690-110791314 protein_coding
ENSMUST00000170374 (Ampd3-003) 110768206-110811919 protein_coding
ENSMUST00000176487 (Ampd3-007) 110768343-110791269 processed_transcript
ENSMUSG00000030787 (Lyve1)
lymphatic vessel endothelial hyaluronan receptor 1 		ENSMUST00000033050 (Lyve1-201) 110850607-110862953 protein_coding
ENSMUSG00000030788 (Rnf141)
ring finger protein 141 		ENSMUST00000106682 (Rnf141-007) 110816671-110844126 protein_coding
ENSMUST00000148367 (Rnf141-010) 110800432-110801599 retained_intron
ENSMUST00000175648 (Rnf141-009) 110816456-110821283 protein_coding
ENSMUST00000175981 (Rnf141-003) 110815146-110837529 protein_coding
ENSMUST00000176048 (Rnf141-008) 110816592-110821608 retained_intron
ENSMUST00000176210 (Rnf141-011) 110800614-110821337 nonsense_mediated_decay
ENSMUST00000176716 (Rnf141-004) 110830653-110844402 processed_transcript
ENSMUST00000176746 (Rnf141-005) 110825297-110844444 protein_coding
ENSMUST00000177236 (Rnf141-001) 110813531-110844457 protein_coding
ENSMUST00000177462 (Rnf141-012) 110815583-110844350 protein_coding
ENSMUST00000177520 (Rnf141-006) 110833762-110844157 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J9_0001ENSG00000072952ENST00000423302ENST00000424001ENST00000526414ENST00000527509ENST00000529068ENST00000529448ENST00000529471ENST00000529547ENST00000531107ENST00000531308ENST00000531786ENST00000532037ENST00000533631ENST00000534266ENST00000541483ENST00000547195ENST00000558540ENSG00000110315ENST00000265981ENST00000528665ENST00000530156ENST00000533412ENST00000534281ENSG00000133800ENST00000256178ENST00000438354ENST00000529598ENST00000531706CIL_0004J9_0002ENSMUSG00000005686ENSMUST00000005829ENSMUST00000106686ENSMUST00000143786ENSMUST00000147587ENSMUST00000148292ENSMUST00000170374ENSMUST00000176487ENSMUSG00000030787ENSMUST00000033050ENSMUSG00000030788ENSMUST00000106682ENSMUST00000148367ENSMUST00000175648ENSMUST00000175981ENSMUST00000176048ENSMUST00000176210ENSMUST00000176716ENSMUST00000176746ENSMUST00000177236ENSMUST00000177462ENSMUST00000177520
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J9_0001ENSG00000072952ENST00000423302ENST00000424001ENST00000526414ENST00000527509ENST00000531107ENST00000541483ENST00000547195ENST00000558540ENSG00000110315ENST00000265981ENST00000528665ENST00000530156ENST00000533412ENST00000534281ENSG00000133800ENST00000256178ENST00000438354ENST00000529598ENST00000531706CIL_0004J9_0002ENSMUSG00000005686ENSMUST00000005829ENSMUST00000170374ENSMUSG00000030787ENSMUST00000033050ENSMUSG00000030788ENSMUST00000106682ENSMUST00000175648ENSMUST00000175981ENSMUST00000177236
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072952 ENST00000423302 N/A N/A N/A 2.897±1.64 N/A N/A N/A N/A 4.713±0.00 2.226±0.00 N/A 4.889±1.38 2.508±0.00 5.949±0.00
ENST00000424001 N/A 21.594±0.00 N/A 6.641±0.00 1.928±0.00 9.757±0.00 1.929±0.00 0.013±0.00 0.253±0.00 4.622±0.00 2.334±0.00 4.233±1.77 3.071±1.53 19.748±0.00
ENST00000526414 N/A N/A 0.806±0.00 N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527509 N/A N/A N/A N/A 3.593±0.00 2.301±0.00 0.467±0.00 N/A N/A N/A N/A N/A 0.643±0.00 1.617±0.00
ENST00000529068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531107 N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A 1.355±0.00 N/A N/A
ENST00000531308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541483 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A 1.455±0.00 N/A 1.787±0.00
ENST00000547195 N/A N/A N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558540 N/A N/A N/A N/A N/A N/A N/A N/A 4.523±0.00 N/A N/A 0.789±0.00 N/A N/A
ENSG00000110315 ENST00000265981 4.384±0.00 6.250±0.00 0.972±0.00 18.768±6.93 8.520±6.00 2.811±0.39 1.645±0.06 4.875±2.91 3.496±1.00 5.348±1.06 4.129±0.77 3.833±0.67 2.737±0.55 10.737±1.61
ENST00000528665 N/A N/A N/A N/A N/A 1.747±0.00 N/A N/A N/A N/A N/A 1.737±0.00 N/A N/A
ENST00000530156 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.524±0.00 N/A N/A N/A 20.399±0.00
ENST00000533412 N/A N/A N/A N/A N/A 3.683±0.00 3.620±0.00 N/A N/A N/A N/A 5.471±0.00 3.405±0.00 38.881±6.37
ENST00000534281 N/A N/A 0.791±0.00 N/A 0.843±0.00 0.743±0.00 N/A 0.774±0.00 N/A 0.820±0.00 0.482±0.00 0.559±0.00 N/A N/A
ENSG00000133800 ENST00000256178 20.235±0.00 8.181±0.00 0.422±0.00 0.552±0.08 4.687±1.15 4.074±0.00 2.874±1.82 2.029±0.32 4.231±0.55 6.365±2.89 1.101±0.82 1.661±1.43 17.095±4.26 1.035±0.57
ENST00000438354 33.365±0.00 14.134±0.00 0.808±0.00 0.874±0.09 4.697±3.02 2.499±0.00 1.018±0.00 3.285±0.03 5.578±0.31 8.274±4.19 2.247±0.00 3.033±3.32 63.443±21.62 2.339±0.00
ENST00000529598 N/A N/A 0.584±0.00 0.681±0.00 8.317±0.00 11.990±9.19 2.305±0.00 6.005±0.00 12.913±2.65 19.384±0.00 1.658±0.00 2.006±0.00 N/A N/A
ENST00000531706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.807±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005686 ENSMUST00000005829 14.587±5.99 5.250±1.08 7.146±0.00 2.061±0.32 6.636±1.21 7.763±2.78 8.114±0.24 5.804±2.32 12.115±3.66 7.855±0.30 3.322±0.74 10.673±3.37 1.939±1.03 N/A
ENSMUST00000106686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170374 4.408±0.87 N/A N/A N/A 2.749±0.00 7.275±3.01 3.977±0.39 2.968±1.04 N/A N/A 1.743±0.20 16.961±5.94 N/A N/A
ENSMUST00000176487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030787 ENSMUST00000033050 8.341±2.33 1.955±0.40 9.762±2.21 0.842±0.50 10.259±1.68 7.735±0.87 4.199±0.40 0.916±0.56 8.277±6.91 38.220±18.67 1.020±0.39 4.500±1.31 8.353±6.43 0.106±0.07
ENSMUSG00000030788 ENSMUST00000106682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.120±5.50
ENSMUST00000148367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.917±0.00
ENSMUST00000175981 N/A N/A N/A 3.434±0.00 N/A N/A N/A N/A 4.992±0.88 13.493±0.47 N/A 2.753±0.00 N/A 5.084±0.51
ENSMUST00000176048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177236 13.882±1.56 9.636±3.51 10.451±0.64 5.379±1.37 9.060±0.97 9.266±0.72 5.593±0.52 5.980±0.51 9.460±3.05 18.844±3.51 5.188±0.38 6.604±2.84 6.174±4.83 5.208±2.61
ENSMUST00000177462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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