C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004JV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077301-ENSDARG00000063624 CGP 7955 15:1144637-1191575
GeneTranscriptPositionBiotype
ENSDARG00000063624 (gfm1)
G elongation factor, mitochondrial 1 		ENSDART00000093152 (gfm1-001) 1163682-1191575 protein_coding
ENSDARG00000077301 (mlf1)
myeloid leukemia factor 1 		ENSDART00000113783 (mlf1-201) 1144639-1158799 protein_coding
ENSDART00000152466 (mlf1-001) 1144637-1159221 protein_coding
ENSDART00000152638 (mlf1-002) 1144637-1154234 protein_coding
CIL_0004JV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178053-ENSG00000168827 CGP 9606 3:158571163-158692575
GeneTranscriptPositionBiotype
ENSG00000079257 (LXN)
latexin 		ENST00000264265 (LXN-001) 158666414-158672693 protein_coding
ENST00000482640 (LXN-002) 158645822-158669593 protein_coding
ENSG00000168827 (GFM1)
G elongation factor, mitochondrial 1 		ENST00000264263 (GFM1-004) 158644597-158692569 protein_coding
ENST00000312756 (GFM1-006) 158652198-158657518 retained_intron
ENST00000464732 (GFM1-007) 158644705-158646781 protein_coding
ENST00000472383 (GFM1-010) 158684631-158691899 protein_coding
ENST00000477721 (GFM1-011) 158681988-158690586 retained_intron
ENST00000478251 (GFM1-005) 158646888-158651020 retained_intron
ENST00000478254 (GFM1-003) 158644528-158692572 nonsense_mediated_decay
ENST00000478576 (GFM1-002) 158644528-158682433 protein_coding
ENST00000481468 (GFM1-009) 158682107-158685314 retained_intron
ENST00000486715 (GFM1-001) 158644278-158692575 protein_coding
ENST00000490261 (GFM1-008) 158660264-158665407 processed_transcript
ENSG00000178053 (MLF1)
myeloid leukemia factor 1 		ENST00000355893 (MLF1-001) 158571163-158606460 protein_coding
ENST00000359117 (MLF1-004) 158571184-158606456 protein_coding
ENST00000392822 (MLF1-201) 158582835-158606459 protein_coding
ENST00000466246 (MLF1-014) 158571261-158600173 protein_coding
ENST00000469452 (MLF1-006) 158571195-158605399 protein_coding
ENST00000471745 (MLF1-002) 158571194-158605392 protein_coding
ENST00000477042 (MLF1-013) 158571194-158600159 protein_coding
ENST00000478894 (MLF1-008) 158571254-158605401 protein_coding
ENST00000482628 (MLF1-007) 158571210-158605218 protein_coding
ENST00000484955 (MLF1-005) 158571173-158605397 protein_coding
ENST00000487838 (MLF1-010) 158571261-158598160 nonsense_mediated_decay
ENST00000491767 (MLF1-015) 158571163-158605192 protein_coding
ENST00000495452 (MLF1-012) 158571194-158600175 nonsense_mediated_decay
ENST00000497004 (MLF1-003) 158571194-158607252 processed_transcript
ENST00000498592 (MLF1-009) 158571191-158602939 protein_coding
ENST00000618075 (MLF1-202) 158571164-158606459 protein_coding
ENST00000619577 (MLF1-203) 158571164-158606459 protein_coding
ENSG00000243025 (MTAPP1)
methylthioadenosine phosphorylase pseudogene 1 		ENST00000489154 (MTAPP1-001) 158609610-158610857 processed_pseudogene
CIL_0004JV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048416-ENSMUSG00000027774 CGP 10090 3:67374097-67476529
GeneTranscriptPositionBiotype
ENSMUSG00000027774 (Gfm1)
G elongation factor, mitochondrial 1 		ENSMUST00000077271 (Gfm1-001) 67430096-67476529 protein_coding
ENSMUST00000160529 (Gfm1-003) 67456479-67474804 retained_intron
ENSMUST00000161009 (Gfm1-002) 67430116-67458805 protein_coding
ENSMUSG00000047557 (Lxn)
latexin 		ENSMUST00000058981 (Lxn-001) 67457998-67463926 protein_coding
ENSMUST00000160202 (Lxn-002) 67461061-67463782 retained_intron
ENSMUST00000160827 (Lxn-003) 67458001-67461634 retained_intron
ENSMUSG00000048416 (Mlf1)
myeloid leukemia factor 1 		ENSMUST00000061322 (Mlf1-002) 67374148-67400003 protein_coding
ENSMUST00000077916 (Mlf1-001) 67374097-67399998 protein_coding
ENSMUST00000126628 (Mlf1-004) 67374143-67395299 processed_transcript
ENSMUST00000142538 (Mlf1-003) 67374125-67380469 processed_transcript
ENSMUSG00000090408 (Gm17402)
predicted gene, 17402 		ENSMUST00000166353 (Gm17402-201) 67365461-67375163 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JV_0001ENSDARG00000063624ENSDART00000093152ENSDARG00000077301ENSDART00000113783ENSDART00000152466ENSDART00000152638CIL_0004JV_0002ENSG00000079257ENST00000264265ENST00000482640ENSG00000168827ENST00000264263ENST00000312756ENST00000464732ENST00000472383ENST00000477721ENST00000478251ENST00000478254ENST00000478576ENST00000481468ENST00000486715ENST00000490261ENSG00000178053ENST00000355893ENST00000359117ENST00000392822ENST00000466246ENST00000469452ENST00000471745ENST00000477042ENST00000478894ENST00000482628ENST00000484955ENST00000487838ENST00000491767ENST00000495452ENST00000497004ENST00000498592ENST00000618075ENST00000619577ENSG00000243025ENST00000489154CIL_0004JV_0003ENSMUSG00000027774ENSMUST00000077271ENSMUST00000160529ENSMUST00000161009ENSMUSG00000047557ENSMUST00000058981ENSMUST00000160202ENSMUST00000160827ENSMUSG00000048416ENSMUST00000061322ENSMUST00000077916ENSMUST00000126628ENSMUST00000142538ENSMUSG00000090408ENSMUST00000166353
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JV_0001ENSDARG00000063624ENSDART00000093152ENSDARG00000077301ENSDART00000113783ENSDART00000152466CIL_0004JV_0002ENSG00000079257ENST00000264265ENSG00000168827ENST00000264263ENST00000478254ENST00000486715ENSG00000178053ENST00000355893ENST00000359117ENST00000392822ENST00000466246ENST00000469452ENST00000471745ENST00000477042ENST00000482628ENST00000484955ENST00000491767ENST00000495452ENST00000498592ENST00000619577ENSG00000243025ENST00000489154CIL_0004JV_0003ENSMUSG00000027774ENSMUST00000077271ENSMUST00000160529ENSMUST00000161009ENSMUSG00000047557ENSMUST00000058981ENSMUST00000160827ENSMUSG00000048416ENSMUST00000061322ENSMUST00000077916ENSMUST00000126628ENSMUSG00000090408ENSMUST00000166353
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063624 ENSDART00000093152 N/A N/A N/A 5.927±3.72 N/A N/A 9.383±0.51 2.469±0.57 6.141±0.00 N/A 7.933±0.00 N/A N/A N/A
ENSDARG00000077301 ENSDART00000113783 N/A N/A N/A 1.129±0.47 N/A N/A 14.892±0.26 N/A 0.127±0.00 N/A 132.223±0.00 N/A N/A N/A
ENSDART00000152466 N/A N/A N/A 2.373±0.37 N/A N/A 6.910±5.16 1.223±1.32 0.067±0.00 N/A 73.700±0.00 N/A N/A N/A
ENSDART00000152638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079257 ENST00000264265 9.638±0.00 11.430±0.00 N/A N/A 6.917±1.22 7.713±2.07 N/A 10.047±0.00 2.847±0.00 15.620±0.00 N/A 12.628±6.62 7.516±3.01 N/A
ENST00000482640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168827 ENST00000264263 3.979±0.00 6.637±0.00 3.671±0.00 3.588±2.21 6.559±0.00 4.607±0.00 7.766±0.00 9.053±0.00 4.330±1.48 5.818±0.00 6.323±0.00 2.385±1.10 4.113±1.86 5.290±3.03
ENST00000312756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478254 3.673±0.00 3.634±0.00 N/A 5.104±0.00 2.589±0.00 N/A 5.051±0.00 1.832±0.00 5.718±0.00 2.096±0.00 2.970±1.78 3.197±0.00 2.783±1.32 6.793±0.00
ENST00000478576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486715 2.631±0.00 N/A N/A 6.408±0.00 9.373±0.00 3.259±1.52 4.607±0.00 3.897±0.04 1.622±0.00 2.583±0.00 3.643±0.00 6.168±0.39 5.325±3.27 10.384±0.00
ENST00000490261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178053 ENST00000355893 N/A 0.244±0.00 0.929±0.00 2.081±0.00 1.236±0.00 0.665±0.00 3.994±0.00 1.008±0.00 1.527±0.00 1.757±0.41 1.111±0.78 1.360±0.30 0.178±0.06 N/A
ENST00000359117 0.567±0.00 N/A N/A 2.409±0.00 0.911±0.13 0.793±0.00 7.324±0.00 0.525±0.00 0.095±0.00 1.002±0.00 N/A 0.690±0.58 0.145±0.00 N/A
ENST00000392822 N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A 0.146±0.00 N/A
ENST00000466246 N/A N/A N/A N/A N/A N/A 10.757±0.00 N/A N/A N/A 9.715±0.00 N/A 0.630±0.00 137.169±0.00
ENST00000469452 N/A 0.649±0.00 N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A
ENST00000471745 N/A N/A N/A N/A 1.119±0.00 N/A 19.747±17.10 N/A N/A N/A 2.583±0.11 N/A N/A N/A
ENST00000477042 N/A N/A N/A N/A N/A N/A 4.667±0.00 N/A N/A 2.758±0.00 4.702±0.00 0.390±0.00 N/A 75.976±0.00
ENST00000478894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482628 N/A 0.734±0.00 N/A N/A N/A N/A N/A N/A N/A 3.458±0.00 1.416±0.00 N/A N/A N/A
ENST00000484955 0.854±0.00 0.343±0.00 N/A 3.774±0.00 2.759±0.00 5.837±0.00 N/A 2.889±0.00 0.077±0.00 6.426±0.00 N/A 4.224±2.98 0.388±0.25 76.491±33.43
ENST00000487838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491767 1.797±0.00 N/A N/A 5.643±0.00 1.947±0.00 N/A N/A N/A N/A N/A N/A 0.143±0.00 0.385±0.16 154.076±0.00
ENST00000495452 N/A N/A N/A N/A 1.808±0.00 0.766±0.00 N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A
ENST00000497004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498592 N/A N/A N/A N/A N/A N/A N/A 2.297±0.00 0.909±0.00 N/A N/A N/A N/A N/A
ENST00000618075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A
ENSG00000243025 ENST00000489154 N/A N/A N/A 0.026±0.00 0.037±0.00 N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A 0.022±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027774 ENSMUST00000077271 3.492±0.31 N/A 3.149±0.41 4.807±1.32 3.258±0.94 N/A 11.995±0.46 6.120±0.78 4.201±1.03 3.183±0.22 14.582±1.16 3.549±1.42 5.220±1.81 1.373±0.23
ENSMUST00000160529 N/A N/A N/A N/A 11.557±2.73 N/A 22.214±1.38 11.942±0.66 13.103±2.61 N/A 14.234±0.80 9.925±0.60 9.656±4.75 N/A
ENSMUST00000161009 8.703±0.41 29.806±8.80 N/A 4.502±0.57 9.551±2.58 11.461±1.46 20.791±1.77 15.675±1.48 14.463±3.49 7.884±1.40 13.519±1.07 11.244±1.56 9.888±6.92 4.416±0.28
ENSMUSG00000047557 ENSMUST00000058981 16.453±2.89 44.429±3.54 14.121±1.48 24.476±7.17 22.806±10.07 35.505±9.87 N/A 15.455±1.97 3.971±0.00 55.825±10.88 N/A 25.924±9.78 19.688±9.36 9.940±4.20
ENSMUST00000160202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.262±0.00 5.911±0.00 N/A
ENSMUSG00000048416 ENSMUST00000061322 0.059±0.00 N/A N/A N/A 10.147±2.55 0.102±0.00 30.744±7.99 0.553±0.17 N/A 1.255±0.08 174.869±22.28 N/A 0.468±0.32 N/A
ENSMUST00000077916 0.293±0.02 1.613±0.12 0.391±0.05 3.635±1.78 2.083±2.24 0.173±0.00 11.914±3.18 0.322±0.19 0.621±0.16 4.800±0.63 22.745±1.80 9.803±9.26 1.270±0.49 262.577±34.57
ENSMUST00000126628 0.287±0.03 N/A N/A N/A 1.730±1.82 N/A N/A 0.228±0.00 0.119±0.00 1.072±0.00 N/A 3.373±1.79 N/A N/A
ENSMUST00000142538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090408 ENSMUST00000166353 N/A N/A N/A N/A 1.770±0.59 1.243±0.00 N/A N/A 1.692±0.38 N/A N/A 7.929±3.67 N/A N/A

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