C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004K2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063223-ENSDARG00000063218 CGP 7955 2:5903803-5934900
GeneTranscriptPositionBiotype
ENSDARG00000063218 (ppm1la)
protein phosphatase, Mg2+/Mn2+ dependent, 1La 		ENSDART00000092182 (ppm1la-001) 5908158-5934900 protein_coding
ENSDARG00000063223 (arl14)
ADP-ribosylation factor-like 14 		ENSDART00000092190 (arl14-001) 5903803-5904831 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004K2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179674-ENSG00000163590 CGP 9606 3:160677159-161078907
GeneTranscriptPositionBiotype
ENSG00000163590 (PPM1L)
protein phosphatase, Mg2+/Mn2+ dependent, 1L 		ENST00000295839 (PPM1L-004) 160842227-161069856 protein_coding
ENST00000464260 (PPM1L-005) 160842213-161071028 protein_coding
ENST00000480117 (PPM1L-003) 160870598-161069844 processed_transcript
ENST00000497343 (PPM1L-002) 160755602-161022462 protein_coding
ENST00000498165 (PPM1L-001) 160756208-161078907 protein_coding
ENSG00000179674 (ARL14)
ADP-ribosylation factor-like 14 		ENST00000320767 (ARL14-001) 160677159-160678452 protein_coding
ENSG00000260572 (RP11-16N11.2)
 ENST00000566372 (RP11-16N11.2-001) 160753428-160755142 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0004K2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000098207-ENSMUSG00000027784 CGP 10090 3:69222419-69560802
GeneTranscriptPositionBiotype
ENSMUSG00000027784 (Ppm1l)
protein phosphatase 1 (formerly 2C)-like 		ENSMUST00000029355 (Ppm1l-001) 69316861-69560802 protein_coding
ENSMUST00000128637 (Ppm1l-003) 69548979-69553099 retained_intron
ENSMUST00000134037 (Ppm1l-002) 69542432-69552918 protein_coding
ENSMUSG00000090743 (Gm17213)
predicted gene 17213 		ENSMUST00000165161 (Gm17213-001) 69431009-69432368 processed_pseudogene
ENSMUSG00000090941 (Gm17212)
predicted gene 17212 		ENSMUST00000166666 (Gm17212-001) 69335502-69335760 processed_pseudogene
ENSMUSG00000091315 (Gm17214)
predicted gene 17214 		ENSMUST00000164501 (Gm17214-001) 69320045-69320585 processed_pseudogene
ENSMUSG00000098207 (Arl14)
ADP-ribosylation factor-like 14 		ENSMUST00000183126 (Arl14-001) 69222419-69223618 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K2_0001ENSDARG00000063218ENSDART00000092182ENSDARG00000063223ENSDART00000092190CIL_0004K2_0002ENSG00000163590ENST00000295839ENST00000464260ENST00000480117ENST00000497343ENST00000498165ENSG00000179674ENST00000320767ENSG00000260572ENST00000566372CIL_0004K2_0003ENSMUSG00000027784ENSMUST00000029355ENSMUST00000128637ENSMUST00000134037ENSMUSG00000090743ENSMUST00000165161ENSMUSG00000090941ENSMUST00000166666ENSMUSG00000091315ENSMUST00000164501ENSMUSG00000098207ENSMUST00000183126
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K2_0001ENSDARG00000063218ENSDART00000092182ENSDARG00000063223ENSDART00000092190CIL_0004K2_0002ENSG00000163590ENST00000295839ENST00000497343ENST00000498165ENSG00000179674ENST00000320767ENSG00000260572ENST00000566372CIL_0004K2_0003ENSMUSG00000027784ENSMUST00000029355ENSMUSG00000090743ENSMUST00000165161ENSMUSG00000090941ENSMUST00000166666ENSMUSG00000091315ENSMUST00000164501ENSMUSG00000098207ENSMUST00000183126
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063218 ENSDART00000092182 N/A N/A N/A 37.303±10.27 N/A N/A 6.346±2.90 7.221±2.44 0.945±0.00 N/A 14.766±0.00 N/A N/A N/A
ENSDARG00000063223 ENSDART00000092190 N/A N/A N/A 0.921±0.46 N/A N/A 0.640±0.29 0.543±0.08 0.045±0.00 N/A 1.989±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163590 ENST00000295839 N/A N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497343 N/A N/A 6.553±0.00 N/A 3.261±0.00 3.545±0.00 3.995±0.00 1.006±0.00 10.670±0.00 1.550±0.00 8.158±0.00 N/A N/A N/A
ENST00000498165 2.511±0.00 0.578±0.00 1.821±0.00 6.572±1.42 2.058±0.07 2.491±1.35 2.878±0.74 1.095±0.64 3.371±2.38 1.092±0.31 3.229±0.00 0.644±0.39 2.097±0.27 1.033±0.54
ENSG00000179674 ENST00000320767 0.025±0.00 0.008±0.00 N/A N/A 1.108±0.00 2.858±1.13 N/A 0.087±0.00 0.180±0.14 N/A N/A 0.158±0.12 0.025±0.01 N/A
ENSG00000260572 ENST00000566372 0.156±0.00 0.447±0.00 0.421±0.00 0.612±0.02 0.453±0.20 0.262±0.09 0.270±0.10 0.589±0.00 0.320±0.22 0.246±0.17 0.344±0.11 0.362±0.17 0.297±0.09 0.349±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027784 ENSMUST00000029355 3.262±1.86 2.763±0.31 3.741±0.46 7.044±1.30 2.232±0.77 1.876±0.21 3.686±0.70 2.185±0.24 1.753±0.54 2.890±0.55 12.498±1.33 4.403±0.71 0.640±0.30 0.719±0.23
ENSMUST00000128637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090743 ENSMUST00000165161 0.062±0.03 N/A N/A N/A N/A 0.196±0.04 0.037±0.01 0.094±0.00 0.105±0.07 0.046±0.01 N/A 0.065±0.07 0.020±0.00 0.062±0.00
ENSMUSG00000090941 ENSMUST00000166666 0.589±0.00 N/A N/A 0.494±0.00 N/A N/A 0.383±0.00 0.563±0.00 0.189±0.00 N/A N/A N/A N/A 0.418±0.00
ENSMUSG00000091315 ENSMUST00000164501 0.222±0.00 N/A 0.087±0.00 0.601±0.00 0.492±0.26 N/A 0.099±0.00 0.107±0.00 0.171±0.10 N/A N/A 0.495±0.02 0.081±0.03 0.136±0.05
ENSMUSG00000098207 ENSMUST00000183126 0.345±0.06 N/A 1.131±0.33 0.022±0.00 0.163±0.12 1.715±0.73 N/A 0.043±0.00 0.064±0.06 0.114±0.00 0.057±0.03 0.597±0.33 0.067±0.05 0.047±0.00

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