C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004K4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128708-ENSG00000172878 CGP 9606 2:171922448-172082430
GeneTranscriptPositionBiotype
ENSG00000115840 (SLC25A12)
solute carrier family 25 (aspartate/glutamate carrier), member 12 		ENST00000263812 (SLC25A12-006) 171784775-171894223 nonsense_mediated_decay
ENST00000422440 (SLC25A12-001) 171784370-171894252 protein_coding
ENST00000426896 (SLC25A12-007) 171834031-171894244 nonsense_mediated_decay
ENST00000464063 (SLC25A12-010) 171855927-171999859 processed_transcript
ENST00000472070 (SLC25A12-002) 171784832-171788942 retained_intron
ENST00000472748 (SLC25A12-009) 171844369-171999855 processed_transcript
ENST00000475360 (SLC25A12-003) 171837149-171893258 nonsense_mediated_decay
ENST00000484227 (SLC25A12-008) 171855801-171999792 processed_transcript
ENST00000485880 (SLC25A12-004) 171815109-171834335 retained_intron
ENST00000494892 (SLC25A12-005) 171809425-171810280 processed_transcript
ENSG00000128708 (HAT1)
histone acetyltransferase 1 		ENST00000264108 (HAT1-001) 171922465-171983682 protein_coding
ENST00000392584 (HAT1-006) 171964833-171980855 retained_intron
ENST00000412731 (HAT1-002) 171922448-171983682 nonsense_mediated_decay
ENST00000457761 (HAT1-003) 171922462-171979995 nonsense_mediated_decay
ENST00000460481 (HAT1-005) 171922462-171923475 processed_transcript
ENST00000494601 (HAT1-004) 171922607-171983623 retained_intron
ENSG00000172878 (METAP1D)
methionyl aminopeptidase type 1D (mitochondrial) 		ENST00000315796 (METAP1D-001) 171999583-172082430 protein_coding
ENST00000392582 (METAP1D-006) 172065604-172072454 processed_transcript
ENST00000468537 (METAP1D-007) 172070663-172080479 processed_transcript
ENST00000488581 (METAP1D-005) 172061573-172080499 processed_transcript
ENST00000491440 (METAP1D-004) 172021799-172063750 processed_transcript
ENST00000493035 (METAP1D-002) 171999943-172064414 processed_transcript
ENST00000493742 (METAP1D-003) 171999955-172061994 processed_transcript
CIL_0004K4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027018-ENSMUSG00000041921 CGP 10090 2:71388958-71525194
GeneTranscriptPositionBiotype
ENSMUSG00000027018 (Hat1)
histone aminotransferase 1 		ENSMUST00000028408 (Hat1-201) 71389260-71441622 protein_coding
ENSMUST00000112122 (Hat1-001) 71388958-71441622 protein_coding
ENSMUST00000144888 (Hat1-003) 71408988-71411950 processed_transcript
ENSMUST00000145147 (Hat1-002) 71420092-71438812 processed_transcript
ENSMUSG00000041921 (Metap1d)
methionyl aminopeptidase type 1D (mitochondrial) 		ENSMUST00000037210 (Metap1d-001) 71453276-71525191 protein_coding
ENSMUST00000123858 (Metap1d-004) 71453333-71515955 processed_transcript
ENSMUST00000124875 (Metap1d-003) 71453363-71524780 processed_transcript
ENSMUST00000138873 (Metap1d-005) 71510258-71517152 processed_transcript
ENSMUST00000139045 (Metap1d-002) 71453351-71525194 processed_transcript
ENSMUST00000148164 (Metap1d-006) 71515412-71516284 processed_transcript
ENSMUSG00000084946 (Dlx1as)
distal-less homeobox 1, antisense 		ENSMUST00000122990 (Dlx1as-002) 71524032-71527927 antisense
ENSMUST00000137251 (Dlx1as-004) 71532784-71537891 antisense
ENSMUST00000140271 (Dlx1as-001) 71516454-71527919 antisense
ENSMUST00000143767 (Dlx1as-003) 71527839-71537810 antisense
ENSMUSG00000086846 (Gm13642)
predicted gene 13642 		ENSMUST00000121697 (Gm13642-001) 71412537-71412917 processed_pseudogene
ENSMUSG00000088066 (Gm23253)
predicted gene, 23253 		ENSMUST00000157441 (Gm23253-201) 71495271-71495374 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K4_0001ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENST00000464063ENST00000472070ENST00000472748ENST00000475360ENST00000484227ENST00000485880ENST00000494892ENSG00000128708ENST00000264108ENST00000392584ENST00000412731ENST00000457761ENST00000460481ENST00000494601ENSG00000172878ENST00000315796ENST00000392582ENST00000468537ENST00000488581ENST00000491440ENST00000493035ENST00000493742CIL_0004K4_0002ENSMUSG00000027018ENSMUST00000028408ENSMUST00000112122ENSMUST00000144888ENSMUST00000145147ENSMUSG00000041921ENSMUST00000037210ENSMUST00000123858ENSMUST00000124875ENSMUST00000138873ENSMUST00000139045ENSMUST00000148164ENSMUSG00000084946ENSMUST00000122990ENSMUST00000137251ENSMUST00000140271ENSMUST00000143767ENSMUSG00000086846ENSMUST00000121697ENSMUSG00000088066ENSMUST00000157441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K4_0001ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENSG00000128708ENST00000264108ENST00000412731ENST00000494601ENSG00000172878ENST00000315796ENST00000493035CIL_0004K4_0002ENSMUSG00000027018ENSMUST00000028408ENSMUST00000112122ENSMUST00000144888ENSMUSG00000041921ENSMUST00000037210ENSMUST00000123858ENSMUST00000124875ENSMUST00000138873ENSMUST00000139045ENSMUSG00000084946ENSMUST00000122990ENSMUST00000140271ENSMUSG00000086846ENSMUST00000121697ENSMUSG00000088066ENSMUST00000157441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115840 ENST00000263812 0.602±0.00 N/A N/A N/A 1.521±0.00 2.662±0.00 20.344±0.00 4.305±0.00 N/A 1.041±0.00 11.825±1.87 2.739±1.05 1.579±0.58 1.693±0.54
ENST00000422440 2.903±0.00 5.274±0.00 2.606±0.00 15.159±2.12 3.850±0.16 5.826±0.00 15.622±3.39 6.418±0.00 1.489±0.97 1.007±0.36 9.564±2.04 3.906±1.30 1.545±0.77 3.713±0.00
ENST00000426896 N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128708 ENST00000264108 9.312±0.00 13.684±0.00 2.513±0.00 7.947±2.63 10.170±1.04 9.548±1.39 6.779±2.84 9.215±4.72 5.852±0.94 8.334±3.48 8.182±7.31 17.178±2.74 8.848±2.14 13.261±5.68
ENST00000392584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412731 2.893±0.00 N/A 1.583±0.00 3.326±0.00 N/A N/A 0.872±0.00 1.509±0.00 N/A 3.570±0.00 2.326±0.00 15.215±13.36 12.203±0.00 6.393±0.00
ENST00000457761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00
ENSG00000172878 ENST00000315796 0.586±0.00 2.134±0.00 N/A N/A 1.923±0.00 N/A N/A 1.394±0.52 1.476±0.00 0.838±0.00 N/A 3.090±0.83 0.641±0.17 1.565±0.10
ENST00000392582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493035 N/A N/A 2.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027018 ENSMUST00000028408 4.355±1.74 1.270±0.23 10.625±1.83 12.733±7.09 3.084±0.63 1.260±0.33 5.074±0.36 4.368±0.75 30.607±34.32 3.235±0.42 6.705±0.34 6.085±6.51 50.479±20.85 9.536±3.72
ENSMUST00000112122 N/A N/A N/A N/A 0.220±0.00 0.206±0.05 0.762±0.00 N/A N/A N/A N/A 0.556±0.15 N/A 2.679±0.62
ENSMUST00000144888 N/A 2.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041921 ENSMUST00000037210 9.804±0.18 2.902±0.00 12.308±2.88 9.631±3.15 5.086±0.82 2.132±0.76 13.386±1.36 12.390±1.04 11.099±4.72 3.199±0.73 14.625±0.73 8.282±5.53 3.131±1.30 3.907±1.77
ENSMUST00000123858 N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.817±0.00 N/A
ENSMUST00000138873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00
ENSMUST00000139045 15.234±4.59 7.300±1.39 14.612±5.13 12.216±8.86 10.831±2.33 6.019±0.41 9.113±1.05 8.141±1.26 13.919±1.92 8.111±0.14 4.187±0.41 14.201±3.46 2.266±1.31 3.321±0.60
ENSMUST00000148164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084946 ENSMUST00000122990 0.178±0.11 N/A 0.116±0.00 N/A 0.098±0.00 N/A 0.141±0.04 0.202±0.09 0.154±0.06 0.167±0.00 N/A 0.255±0.03 0.171±0.03 N/A
ENSMUST00000137251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140271 N/A N/A 0.070±0.00 N/A 0.083±0.00 N/A 0.081±0.00 N/A 0.092±0.00 N/A 0.190±0.00 0.128±0.00 0.081±0.00 N/A
ENSMUST00000143767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086846 ENSMUST00000121697 0.400±0.26 0.279±0.00 0.103±0.00 0.256±0.03 0.419±0.30 0.538±0.27 0.128±0.00 0.196±0.07 0.385±0.16 0.191±0.00 N/A 0.363±0.20 0.349±0.03 0.661±0.23
ENSMUSG00000088066 ENSMUST00000157441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.753±0.00 N/A N/A

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