C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004KS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019335-ENSDARG00000034503 CGP 7955 2:48402633-48489514
GeneTranscriptPositionBiotype
ENSDARG00000019335 (hes6)
hairy and enhancer of split 6 (Drosophila)
ENSDART00000023040 (hes6-001) 48417314-48418868 protein_coding
ENSDART00000131573 (hes6-002) 48417366-48418207 retained_intron
ENSDART00000141495 (hes6-004) 48402633-48418192 protein_coding
ENSDART00000146818 (hes6-003) 48417597-48418505 retained_intron
ENSDARG00000034503 (per2)
period homolog 2 (Drosophila)
ENSDART00000039735 (per2-201) 48424681-48470959 protein_coding
ENSDART00000098004 (per2-202) 48423773-48470867 protein_coding
ENSDART00000148788 (per2-001) 48423772-48489514 protein_coding
ENSDARG00000039650 (itm2cb)
integral membrane protein 2Cb
ENSDART00000057957 (itm2cb-001) 48398636-48413157 protein_coding
ENSDART00000128103 (itm2cb-201) 48398577-48420960 protein_coding
CIL_0004KS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144485-ENSG00000132326 CGP 9606 2:238238267-238290102
GeneTranscriptPositionBiotype
ENSG00000132326 (PER2)
period circadian clock 2
ENST00000254657 (PER2-001) 238244038-238288609 protein_coding
ENST00000355768 (PER2-002) 238261810-238277936 protein_coding
ENST00000431832 (PER2-004) 238275863-238290102 protein_coding
ENST00000491417 (PER2-005) 238261441-238262975 retained_intron
ENSG00000144485 (HES6)
hes family bHLH transcription factor 6
ENST00000272937 (HES6-001) 238238267-238240124 protein_coding
ENST00000409002 (HES6-002) 238238276-238239971 protein_coding
ENST00000409160 (HES6-003) 238238270-238240038 protein_coding
ENST00000409182 (HES6-006) 238238605-238239958 protein_coding
ENST00000409356 (HES6-007) 238239170-238240024 protein_coding
ENST00000409574 (HES6-005) 238238860-238240041 protein_coding
ENST00000417803 (HES6-009) 238238776-238239671 protein_coding
ENST00000436051 (HES6-004) 238239180-238240662 protein_coding
ENST00000450098 (HES6-008) 238239216-238240001 protein_coding
CIL_0004KS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067071-ENSMUSG00000055866 CGP 10090 1:91411483-91459324
GeneTranscriptPositionBiotype
ENSMUSG00000055866 (Per2)
period circadian clock 2
ENSMUST00000069620 (Per2-001) 91415982-91459324 protein_coding
ENSMUST00000185298 (Per2-002) 91447722-91449865 processed_transcript
ENSMUSG00000067071 (Hes6)
hairy and enhancer of split 6
ENSMUST00000086851 (Hes6-001) 91411483-91413222 protein_coding
ENSMUST00000126136 (Hes6-005) 91411483-91413222 retained_intron
ENSMUST00000132188 (Hes6-004) 91411483-91413208 retained_intron
ENSMUST00000150520 (Hes6-002) 91412348-91414038 processed_transcript
ENSMUST00000155752 (Hes6-003) 91412287-91413208 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KS_0001ENSDARG00000019335ENSDART00000023040ENSDART00000131573ENSDART00000141495ENSDART00000146818ENSDARG00000034503ENSDART00000039735ENSDART00000098004ENSDART00000148788ENSDARG00000039650ENSDART00000057957ENSDART00000128103CIL_0004KS_0002ENSG00000132326ENST00000254657ENST00000355768ENST00000431832ENST00000491417ENSG00000144485ENST00000272937ENST00000409002ENST00000409160ENST00000409182ENST00000409356ENST00000409574ENST00000417803ENST00000436051ENST00000450098CIL_0004KS_0003ENSMUSG00000055866ENSMUST00000069620ENSMUST00000185298ENSMUSG00000067071ENSMUST00000086851ENSMUST00000126136ENSMUST00000132188ENSMUST00000150520ENSMUST00000155752
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KS_0001ENSDARG00000019335ENSDART00000023040ENSDART00000146818ENSDARG00000034503ENSDART00000039735ENSDART00000098004ENSDART00000148788ENSDARG00000039650ENSDART00000057957ENSDART00000128103CIL_0004KS_0002ENSG00000132326ENST00000254657ENST00000355768ENSG00000144485ENST00000272937ENST00000409002ENST00000409160ENST00000409182ENST00000409356ENST00000409574ENST00000417803CIL_0004KS_0003ENSMUSG00000055866ENSMUST00000069620ENSMUST00000185298ENSMUSG00000067071ENSMUST00000086851ENSMUST00000126136ENSMUST00000132188ENSMUST00000150520ENSMUST00000155752
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019335 ENSDART00000023040 N/A N/A N/A 11.456±0.41 N/A N/A 8.249±5.45 1.105±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000131573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146818 N/A N/A N/A 7.914±0.00 N/A N/A 8.664±0.00 N/A N/A N/A 2.235±0.00 N/A N/A N/A
ENSDARG00000034503 ENSDART00000039735 N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A N/A
ENSDART00000098004 N/A N/A N/A 8.717±2.60 N/A N/A 2.631±0.68 3.480±0.83 0.530±0.00 N/A 3.704±0.00 N/A N/A N/A
ENSDART00000148788 N/A N/A N/A 9.407±7.05 N/A N/A 0.834±0.00 1.999±0.00 N/A N/A 3.738±0.00 N/A N/A N/A
ENSDARG00000039650 ENSDART00000057957 N/A N/A N/A 96.893±30.80 N/A N/A 4.053±0.95 7.301±5.49 0.883±0.00 N/A 6.204±0.00 N/A N/A N/A
ENSDART00000128103 N/A N/A N/A 42.849±25.67 N/A N/A 0.832±0.19 4.307±1.35 N/A N/A 1.172±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132326 ENST00000254657 2.109±0.00 3.343±0.00 0.506±0.00 1.244±0.18 4.759±2.59 1.847±0.00 2.197±0.00 2.077±0.26 1.210±0.00 4.994±0.00 2.618±1.56 3.279±1.66 1.144±0.04 5.746±0.73
ENST00000355768 N/A N/A 0.841±0.00 N/A 1.880±0.00 2.909±0.00 1.038±0.00 N/A N/A 2.279±0.00 N/A 4.325±0.00 N/A N/A
ENST00000431832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144485 ENST00000272937 N/A N/A N/A N/A 1.119±0.00 0.673±0.00 N/A N/A N/A 0.340±0.00 N/A 5.506±0.00 1.237±0.37 N/A
ENST00000409002 0.871±0.00 2.196±0.00 0.186±0.00 11.075±5.23 0.869±0.00 6.084±0.00 N/A N/A 0.922±0.47 3.545±0.00 1.178±0.00 6.459±2.58 0.611±0.00 7.727±0.30
ENST00000409160 N/A 0.628±0.00 N/A 0.651±0.00 0.370±0.00 1.135±0.59 0.925±0.00 1.108±0.00 N/A N/A N/A 4.136±4.88 N/A 2.853±0.00
ENST00000409182 N/A 0.781±0.00 N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A 1.748±0.00 0.534±0.00 10.982±0.00
ENST00000409356 N/A N/A N/A N/A N/A 0.529±0.00 2.192±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409574 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 0.712±0.00 N/A N/A N/A
ENST00000417803 0.864±0.00 N/A N/A N/A N/A 0.652±0.00 N/A 2.355±0.00 N/A N/A N/A N/A N/A N/A
ENST00000436051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055866 ENSMUST00000069620 4.197±0.75 13.293±2.12 16.050±0.17 3.236±0.19 3.533±1.06 5.670±2.13 1.852±0.76 1.933±0.57 2.306±1.25 6.049±4.84 2.578±1.57 5.975±2.58 1.582±1.24 1.105±0.43
ENSMUST00000185298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.762±0.00
ENSMUSG00000067071 ENSMUST00000086851 8.930±1.58 73.972±15.21 7.685±0.63 30.914±20.62 9.032±3.30 41.944±3.09 5.561±3.53 23.790±0.43 27.136±16.06 13.022±2.84 3.882±0.80 16.701±4.14 7.672±2.41 1.467±0.45
ENSMUST00000126136 5.208±1.21 40.275±5.17 4.536±1.31 19.056±16.63 8.179±3.26 21.179±1.82 2.095±0.71 4.839±0.44 5.552±1.75 8.734±1.44 1.054±0.35 7.238±1.81 1.628±0.63 0.622±0.26
ENSMUST00000132188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00
ENSMUST00000150520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.135±3.48 N/A N/A
ENSMUST00000155752 N/A 43.317±2.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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