C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004L4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062448-ENSDARG00000062445 CGP 7955 18:19755322-19806075
GeneTranscriptPositionBiotype
ENSDARG00000062445 (pias1b)
protein inhibitor of activated STAT, 1b 		ENSDART00000090310 (pias1b-001) 19771126-19806075 protein_coding
ENSDART00000155054 (pias1b-201) 19787273-19805840 protein_coding
ENSDARG00000062448 (skor1b)
SKI family transcriptional corepressor 1b 		ENSDART00000090334 (skor1b-201) 19755322-19762740 protein_coding
ENSDART00000138103 (skor1b-001) 19756498-19762220 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004L4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188779-ENSG00000033800 CGP 9606 15:67819704-68198603
GeneTranscriptPositionBiotype
ENSG00000033800 (PIAS1)
protein inhibitor of activated STAT, 1 		ENST00000249636 (PIAS1-001) 68054179-68193846 protein_coding
ENST00000545237 (PIAS1-002) 68054576-68188064 protein_coding
ENST00000562190 (PIAS1-005) 68054318-68142339 nonsense_mediated_decay
ENST00000563996 (PIAS1-003) 68181211-68190758 nonsense_mediated_decay
ENST00000564009 (PIAS1-004) 68146662-68153961 retained_intron
ENST00000564915 (PIAS1-007) 68054309-68142339 nonsense_mediated_decay
ENST00000567417 (PIAS1-006) 68176538-68181873 processed_transcript
ENST00000611270 (PIAS1-008) 68191682-68198603 processed_transcript
ENSG00000188779 (SKOR1)
SKI family transcriptional corepressor 1 		ENST00000341418 (SKOR1-001) 67819704-67834561 protein_coding
ENST00000380035 (SKOR1-003) 67825545-67834555 protein_coding
ENST00000554054 (SKOR1-004) 67825516-67834555 protein_coding
ENST00000554240 (SKOR1-002) 67823557-67834538 protein_coding
ENSG00000245719 (RP11-34F13.2)
 ENST00000502156 (RP11-34F13.2-001) 67834310-67838879 lincRNA
ENSG00000259410 (RP11-34F13.3)
 ENST00000558889 (RP11-34F13.3-001) 67832725-67873866 lincRNA
ENST00000560577 (RP11-34F13.3-002) 67833082-67873866 retained_intron
ENSG00000260109 (RP11-883G10.1)
 ENST00000568867 (RP11-883G10.1-001) 67985059-67986288 unprocessed_pseudogene
ENSG00000261702 (RP11-282M16.1)
 ENST00000567857 (RP11-282M16.1-001) 67974391-67974625 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L4_0001ENSDARG00000062445ENSDART00000090310ENSDART00000155054ENSDARG00000062448ENSDART00000090334ENSDART00000138103CIL_0004L4_0002ENSG00000033800ENST00000249636ENST00000545237ENST00000562190ENST00000563996ENST00000564009ENST00000564915ENST00000567417ENST00000611270ENSG00000188779ENST00000341418ENST00000380035ENST00000554054ENST00000554240ENSG00000245719ENST00000502156ENSG00000259410ENST00000558889ENST00000560577ENSG00000260109ENST00000568867ENSG00000261702ENST00000567857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L4_0001ENSDARG00000062445ENSDART00000090310ENSDART00000155054ENSDARG00000062448ENSDART00000090334ENSDART00000138103CIL_0004L4_0002ENSG00000033800ENST00000249636ENST00000545237ENST00000564915ENSG00000188779ENST00000341418ENST00000554240ENSG00000245719ENST00000502156ENSG00000259410ENST00000558889ENST00000560577ENSG00000260109ENST00000568867ENSG00000261702ENST00000567857
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062445 ENSDART00000090310 N/A N/A N/A N/A N/A N/A 0.721±0.27 0.761±0.00 0.273±0.00 N/A 1.633±0.00 N/A N/A N/A
ENSDART00000155054 N/A N/A N/A N/A N/A N/A 1.041±0.00 0.917±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000062448 ENSDART00000090334 N/A N/A N/A 0.914±0.37 N/A N/A 0.271±0.01 0.075±0.00 N/A N/A 0.111±0.00 N/A N/A N/A
ENSDART00000138103 N/A N/A N/A 0.937±0.00 N/A N/A 0.020±0.00 0.409±0.21 0.017±0.00 N/A 0.070±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033800 ENST00000249636 N/A N/A N/A N/A 2.226±0.00 N/A 3.165±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000545237 N/A N/A 2.873±0.00 6.995±0.00 N/A N/A 4.154±1.04 4.264±0.00 5.523±3.55 6.373±0.74 2.468±0.73 5.584±1.26 3.785±0.13 9.692±0.83
ENST00000562190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.136±0.00 N/A N/A N/A
ENST00000567417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188779 ENST00000341418 0.035±0.00 N/A N/A N/A 0.117±0.00 N/A 0.010±0.00 N/A N/A N/A N/A 0.108±0.00 N/A N/A
ENST00000380035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554240 N/A 0.195±0.00 0.099±0.00 0.574±0.00 0.038±0.00 N/A 0.105±0.00 0.022±0.00 N/A 0.038±0.02 N/A 0.207±0.00 0.116±0.06 N/A
ENSG00000245719 ENST00000502156 N/A N/A N/A 0.266±0.00 0.058±0.00 N/A N/A 0.024±0.00 0.062±0.00 N/A N/A N/A 0.064±0.00 N/A
ENSG00000259410 ENST00000558889 N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560577 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.588±0.00 N/A N/A N/A 0.683±0.00
ENSG00000260109 ENST00000568867 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261702 ENST00000567857 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A

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