C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004L7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164221-ENSG00000145780 CGP 9606 5:115267188-115544894
GeneTranscriptPositionBiotype
ENSG00000145780 (FEM1C)
fem-1 homolog c (C. elegans) 		ENST00000274457 (FEM1C-001) 115520908-115544894 protein_coding
ENSG00000164221 (CCDC112)
coiled-coil domain containing 112 		ENST00000379611 (CCDC112-001) 115267188-115296831 protein_coding
ENST00000395557 (CCDC112-002) 115267639-115296268 protein_coding
ENST00000502975 (CCDC112-007) 115269599-115271610 retained_intron
ENST00000503027 (CCDC112-005) 115275339-115296623 processed_transcript
ENST00000506442 (CCDC112-004) 115267375-115296693 protein_coding
ENST00000512261 (CCDC112-003) 115267355-115296065 protein_coding
ENST00000513730 (CCDC112-006) 115275335-115277185 retained_intron
ENSG00000248722 (AK3P4)
adenylate kinase 3 pseudogene 4 		ENST00000504283 (AK3P4-001) 115402380-115402962 processed_pseudogene
ENSG00000249026 (CTNNAP1)
 ENST00000515849 (CTNNAP1-001) 115389643-115392370 processed_pseudogene
ENSG00000249944 (CTB-161J7.1)
 ENST00000502605 (CTB-161J7.1-001) 115489634-115489931 processed_pseudogene
ENSG00000250197 (HMGN1P15)
high mobility group nucleosome binding domain 1 pseudogene 15 		ENST00000513870 (HMGN1P15-001) 115289036-115289330 processed_pseudogene
ENSG00000250444 (CCT5P1)
chaperonin containing TCP1, subunit 5 (epsilon) pseudogene 1 		ENST00000502314 (CCT5P1-001) 115512077-115513694 processed_pseudogene
CIL_0004L7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071855-ENSMUSG00000033319 CGP 10090 18:46282151-46525971
GeneTranscriptPositionBiotype
ENSMUSG00000033319 (Fem1c)
fem-1 homolog c (C.elegans) 		ENSMUST00000036226 (Fem1c-001) 46501746-46525971 protein_coding
ENSMUSG00000046487 (Mospd4)
motile sperm domain containing 4 		ENSMUST00000180618 (Mospd4-001) 46465215-46465790 processed_pseudogene
ENSMUSG00000071855 (Ccdc112)
coiled-coil domain containing 112 		ENSMUST00000072835 (Ccdc112-201) 46282151-46311928 protein_coding
ENSMUSG00000095541 (Gm24617)
predicted gene, 24617 		ENSMUST00000116705 (Gm24617-201) 46367365-46367485 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L7_0001ENSG00000145780ENST00000274457ENSG00000164221ENST00000379611ENST00000395557ENST00000502975ENST00000503027ENST00000506442ENST00000512261ENST00000513730ENSG00000248722ENST00000504283ENSG00000249026ENST00000515849ENSG00000249944ENST00000502605ENSG00000250197ENST00000513870ENSG00000250444ENST00000502314CIL_0004L7_0002ENSMUSG00000033319ENSMUST00000036226ENSMUSG00000046487ENSMUST00000180618ENSMUSG00000071855ENSMUST00000072835ENSMUSG00000095541ENSMUST00000116705
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004L7_0001ENSG00000145780ENST00000274457ENSG00000164221ENST00000379611ENST00000395557ENST00000502975ENST00000503027ENST00000506442ENST00000512261ENST00000513730ENSG00000248722ENST00000504283ENSG00000249026ENST00000515849ENSG00000249944ENST00000502605ENSG00000250197ENST00000513870ENSG00000250444ENST00000502314CIL_0004L7_0002ENSMUSG00000033319ENSMUST00000036226ENSMUSG00000046487ENSMUST00000180618ENSMUSG00000071855ENSMUST00000072835ENSMUSG00000095541ENSMUST00000116705
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145780 ENST00000274457 5.764±0.00 2.895±0.00 3.207±0.00 6.414±0.71 4.934±0.15 5.034±1.50 7.156±3.98 3.315±0.09 4.833±2.91 5.294±1.45 5.771±0.56 2.198±0.54 1.414±0.63 8.457±3.07
ENSG00000164221 ENST00000379611 0.190±0.00 N/A N/A 1.090±0.82 0.768±0.23 N/A 0.173±0.04 N/A 0.402±0.00 N/A N/A 0.899±0.46 0.407±0.35 4.125±0.00
ENST00000395557 0.410±0.00 0.247±0.00 N/A 0.207±0.00 0.568±0.00 0.938±0.00 0.249±0.15 N/A 0.133±0.00 N/A 0.348±0.00 1.404±1.02 0.165±0.05 18.244±9.89
ENST00000502975 N/A N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A
ENST00000503027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 0.605±0.00 N/A N/A
ENST00000506442 0.347±0.00 0.894±0.00 0.203±0.00 1.412±0.53 0.879±0.00 1.301±0.76 0.350±0.29 0.564±0.51 0.268±0.00 0.751±0.09 N/A 0.645±0.05 0.235±0.09 4.528±0.00
ENST00000512261 N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A
ENST00000513730 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.442±0.00 0.414±0.00 1.007±0.00 N/A N/A
ENSG00000248722 ENST00000504283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.25 N/A N/A
ENSG00000249026 ENST00000515849 0.069±0.00 0.026±0.00 N/A 0.022±0.00 0.103±0.02 0.078±0.02 0.024±0.00 0.037±0.00 N/A 0.063±0.05 0.005±0.00 0.117±0.07 0.018±0.00 0.033±0.00
ENSG00000249944 ENST00000502605 N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000250197 ENST00000513870 N/A 0.135±0.00 N/A 0.173±0.00 N/A 1.257±0.00 N/A N/A N/A N/A N/A 0.491±0.00 0.047±0.00 0.312±0.00
ENSG00000250444 ENST00000502314 0.008±0.00 0.026±0.00 N/A 0.027±0.00 0.028±0.02 0.008±0.00 0.055±0.02 N/A N/A 0.008±0.00 0.023±0.00 0.031±0.01 N/A 0.013±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033319 ENSMUST00000036226 6.538±3.61 4.454±0.69 6.460±0.12 6.477±2.81 5.221±0.72 4.166±0.59 3.511±0.56 5.544±0.60 3.327±0.87 7.263±0.35 2.506±0.70 5.993±0.98 7.034±2.02 34.516±20.29
ENSMUSG00000046487 ENSMUST00000180618 0.177±0.10 0.192±0.04 0.124±0.06 0.085±0.04 0.066±0.00 0.350±0.18 0.131±0.04 0.412±0.24 0.095±0.06 0.090±0.03 0.387±0.13 0.167±0.03 0.220±0.17 142.055±38.62
ENSMUSG00000071855 ENSMUST00000072835 0.124±0.10 0.229±0.04 1.357±0.24 3.982±2.94 0.221±0.11 0.158±0.06 0.078±0.03 0.178±0.05 0.163±0.13 0.361±0.14 0.127±0.03 1.134±1.49 3.219±2.23 2.592±3.22
ENSMUSG00000095541 ENSMUST00000116705 N/A N/A 16.263±0.00 14.574±0.00 N/A N/A N/A N/A 15.159±9.98 N/A N/A N/A N/A N/A

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