C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004O6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181652-ENSG00000197150 CGP 9606 7:151012209-151047782
GeneTranscriptPositionBiotype
ENSG00000164867 (NOS3)
nitric oxide synthase 3 (endothelial cell) 		ENST00000297494 (NOS3-001) 150990995-151014588 protein_coding
ENST00000460603 (NOS3-008) 151001867-151002963 processed_transcript
ENST00000461406 (NOS3-002) 150991104-151014474 protein_coding
ENST00000467517 (NOS3-005) 150993804-151003935 protein_coding
ENST00000468293 (NOS3-010) 151010520-151013378 processed_transcript
ENST00000473057 (NOS3-009) 151008874-151009570 processed_transcript
ENST00000475017 (NOS3-006) 151008937-151012065 protein_coding
ENST00000475454 (NOS3-013) 151012406-151013529 retained_intron
ENST00000477227 (NOS3-011) 151010533-151014289 processed_transcript
ENST00000484524 (NOS3-004) 150993804-151003935 protein_coding
ENSG00000181652 (ATG9B)
autophagy related 9B 		ENST00000404733 (ATG9B-012) 151013295-151014304 retained_intron
ENST00000466157 (ATG9B-011) 151021188-151024494 processed_transcript
ENST00000469530 (ATG9B-007) 151015182-151024423 protein_coding
ENST00000471797 (ATG9B-010) 151014871-151015996 retained_intron
ENST00000473134 (ATG9B-008) 151020918-151023516 retained_intron
ENST00000473409 (ATG9B-005) 151019837-151024499 processed_transcript
ENST00000476282 (ATG9B-009) 151013854-151015589 processed_transcript
ENST00000498521 (ATG9B-020) 151012209-151012785 processed_transcript
ENST00000605952 (ATG9B-001) 151012214-151024499 nonsense_mediated_decay
ENST00000611177 (ATG9B-003) 151015172-151018801 processed_transcript
ENST00000617967 (ATG9B-002) 151013238-151024465 processed_transcript
ENSG00000197150 (ABCB8)
ATP-binding cassette, sub-family B (MDR/TAP), member 8 		ENST00000297504 (ABCB8-003) 151028450-151045562 protein_coding
ENST00000358849 (ABCB8-005) 151028423-151047782 protein_coding
ENST00000461373 (ABCB8-012) 151028423-151033842 protein_coding
ENST00000462605 (ABCB8-016) 151028450-151033242 retained_intron
ENST00000466514 (ABCB8-007) 151028450-151045562 nonsense_mediated_decay
ENST00000466956 (ABCB8-017) 151028450-151034599 processed_transcript
ENST00000469410 (ABCB8-021) 151028657-151033060 processed_transcript
ENST00000470645 (ABCB8-004) 151028450-151042030 nonsense_mediated_decay
ENST00000471796 (ABCB8-015) 151028450-151033034 processed_transcript
ENST00000472698 (ABCB8-018) 151028473-151031626 processed_transcript
ENST00000477092 (ABCB8-010) 151028467-151037570 protein_coding
ENST00000477719 (ABCB8-009) 151028464-151037524 protein_coding
ENST00000482309 (ABCB8-006) 151028426-151045409 nonsense_mediated_decay
ENST00000482899 (ABCB8-011) 151037688-151045562 retained_intron
ENST00000488370 (ABCB8-019) 151028476-151033698 processed_transcript
ENST00000488551 (ABCB8-020) 151028476-151034547 nonsense_mediated_decay
ENST00000488826 (ABCB8-013) 151028437-151033750 processed_transcript
ENST00000489192 (ABCB8-014) 151028438-151034551 nonsense_mediated_decay
ENST00000491920 (ABCB8-023) 151035619-151037586 protein_coding
ENST00000493338 (ABCB8-022) 151032930-151034597 processed_transcript
ENST00000498578 (ABCB8-008) 151028462-151045563 protein_coding
ENST00000542328 (ABCB8-201) 151028422-151047782 protein_coding
ENSG00000243433 (RP11-148K1.10)
 ENST00000479085 (RP11-148K1.10-001) 151028781-151029754 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0004O6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038295-ENSMUSG00000028973 CGP 10090 5:24384181-24410054
GeneTranscriptPositionBiotype
ENSMUSG00000028973 (Abcb8)
ATP-binding cassette, sub-family B (MDR/TAP), member 8 		ENSMUST00000073076 (Abcb8-201) 24394155-24409945 protein_coding
ENSMUST00000115074 (Abcb8-002) 24394396-24403977 protein_coding
ENSMUST00000115077 (Abcb8-001) 24393676-24410054 protein_coding
ENSMUST00000127816 (Abcb8-007) 24402254-24406711 retained_intron
ENSMUST00000136414 (Abcb8-006) 24394408-24400665 retained_intron
ENSMUST00000136459 (Abcb8-003) 24405815-24409946 retained_intron
ENSMUST00000138168 (Abcb8-005) 24393663-24400222 protein_coding
ENSMUST00000151535 (Abcb8-004) 24406408-24409924 protein_coding
ENSMUSG00000028978 (Nos3)
nitric oxide synthase 3, endothelial cell 		ENSMUST00000030834 (Nos3-001) 24364810-24384474 protein_coding
ENSMUST00000115090 (Nos3-002) 24364810-24384327 protein_coding
ENSMUSG00000038295 (Atg9b)
autophagy related 9B 		ENSMUST00000059401 (Atg9b-001) 24384181-24392143 protein_coding
ENSMUST00000128831 (Atg9b-002) 24387105-24387966 processed_transcript
ENSMUST00000138716 (Atg9b-003) 24384620-24390635 processed_transcript

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O6_0001ENSG00000164867ENST00000297494ENST00000461406ENST00000467517ENST00000484524ENSG00000181652ENST00000404733ENST00000611177ENSG00000197150ENST00000297504ENST00000358849ENST00000466514ENST00000472698ENST00000477092ENST00000482309ENST00000482899ENST00000491920ENST00000493338ENST00000498578ENSG00000243433ENST00000479085CIL_0004O6_0002ENSMUSG00000028973ENSMUST00000073076ENSMUST00000115074ENSMUST00000115077ENSMUST00000136459ENSMUSG00000028978ENSMUST00000030834ENSMUST00000115090ENSMUSG00000038295ENSMUST00000059401ENSMUST00000138716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164867 ENST00000297494 6.180±0.00 3.001±0.00 N/A 1.182±0.00 0.411±0.00 1.002±0.94 2.073±0.00 1.179±0.99 1.300±0.00 3.436±0.00 0.822±0.30 3.139±1.96 4.161±2.21 2.314±0.00
ENST00000460603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461406 10.010±0.00 6.136±0.00 N/A 2.559±0.00 4.821±0.00 3.047±0.00 1.739±0.00 1.395±0.00 1.287±0.00 5.845±0.00 1.225±0.00 5.871±3.08 N/A N/A
ENST00000467517 N/A N/A 0.396±0.00 N/A 0.239±0.00 N/A N/A N/A 1.205±0.00 N/A N/A N/A N/A N/A
ENST00000468293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484524 N/A N/A N/A 1.555±0.00 N/A N/A N/A N/A N/A 2.923±0.00 N/A N/A N/A N/A
ENSG00000181652 ENST00000404733 25.726±0.00 28.406±0.00 N/A N/A N/A 9.608±0.00 N/A 5.929±0.00 5.391±0.00 N/A N/A N/A N/A N/A
ENST00000466157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611177 N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.206±0.00 13.672±0.00
ENST00000617967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197150 ENST00000297504 1.783±0.00 4.220±0.00 0.587±0.00 2.629±0.00 2.717±0.00 N/A N/A N/A N/A 2.288±0.00 1.030±0.00 N/A 7.380±2.04 1.958±0.00
ENST00000358849 N/A N/A N/A 1.986±0.00 0.836±0.00 0.260±0.00 0.817±0.58 N/A 1.189±0.00 0.709±0.00 0.196±0.00 4.041±0.38 1.954±0.34 2.571±1.66
ENST00000461373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466514 N/A 2.402±0.00 N/A 2.149±0.00 2.288±0.00 2.465±0.00 N/A 4.026±0.00 5.477±0.00 N/A N/A 6.510±0.00 N/A N/A
ENST00000466956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472698 N/A N/A N/A N/A N/A N/A N/A 0.860±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477092 1.022±0.00 N/A N/A 2.669±0.00 0.530±0.00 N/A 0.755±0.00 4.182±0.00 N/A N/A N/A 5.656±0.00 3.564±0.00 N/A
ENST00000477719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482309 0.863±0.00 N/A N/A N/A N/A N/A 2.222±0.00 0.747±0.00 2.769±0.00 N/A N/A 4.144±0.76 8.130±1.90 2.106±0.00
ENST00000482899 N/A 0.945±0.00 0.404±0.00 N/A 0.521±0.00 N/A N/A 0.202±0.00 N/A N/A N/A 1.307±0.00 N/A N/A
ENST00000488370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491920 N/A N/A N/A N/A N/A N/A N/A 0.903±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493338 N/A N/A 1.542±0.00 N/A N/A N/A N/A N/A 2.561±0.00 N/A N/A N/A N/A N/A
ENST00000498578 1.554±0.00 N/A N/A N/A 3.960±0.00 1.716±0.00 N/A 6.324±0.00 6.087±0.00 N/A 1.380±0.00 3.372±1.80 10.625±2.54 2.198±0.00
ENST00000542328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243433 ENST00000479085 N/A N/A N/A N/A 3.426±0.00 N/A N/A N/A N/A 3.017±0.00 N/A 5.624±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028973 ENSMUST00000073076 21.941±2.73 32.960±5.05 9.013±1.01 12.441±4.26 26.641±10.50 29.675±5.49 33.601±3.96 32.716±2.55 14.354±2.39 9.107±1.20 14.272±1.24 20.491±7.44 15.228±6.07 9.034±3.89
ENSMUST00000115074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.547±0.00 5.146±0.69 2.234±0.00
ENSMUST00000115077 N/A N/A N/A 1.432±0.00 2.622±0.00 N/A N/A N/A N/A N/A 2.790±0.53 2.379±0.00 N/A N/A
ENSMUST00000127816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136459 N/A N/A 1.932±0.00 3.427±0.79 4.366±0.00 N/A N/A N/A N/A N/A N/A 3.599±0.00 N/A N/A
ENSMUST00000138168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028978 ENSMUST00000030834 14.060±5.67 11.282±2.53 3.560±0.05 3.370±0.38 16.599±7.17 2.100±0.41 8.339±2.68 4.091±0.44 1.197±0.36 8.222±1.54 2.243±0.72 7.339±2.45 1.468±0.41 0.972±0.00
ENSMUST00000115090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.193±0.00 N/A N/A
ENSMUSG00000038295 ENSMUST00000059401 N/A N/A 2.135±0.69 N/A 2.726±0.77 0.479±0.00 N/A N/A 0.859±0.70 3.761±0.20 N/A 2.018±0.24 1.051±0.60 0.611±0.00
ENSMUST00000128831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138716 N/A N/A N/A N/A N/A N/A N/A N/A 2.464±0.00 N/A N/A N/A 1.234±0.30 N/A

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