C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172007-ENSG00000145391 CGP 9606 4:139453232-139606699
GeneTranscriptPositionBiotype
ENSG00000145391 (SETD7)
SET domain containing (lysine methyltransferase) 7 		ENST00000274031 (SETD7-001) 139506036-139556774 protein_coding
ENST00000404104 (SETD7-002) 139532579-139556769 protein_coding
ENST00000406354 (SETD7-003) 139532582-139556208 protein_coding
ENST00000506866 (SETD7-004) 139495941-139556238 protein_coding
ENST00000515101 (SETD7-006) 139496089-139520396 retained_intron
ENST00000608795 (SETD7-008) 139533231-139606699 protein_coding
ENST00000608958 (SETD7-009) 139596608-139606699 protein_coding
ENSG00000172007 (RAB33B)
RAB33B, member RAS oncogene family 		ENST00000305626 (RAB33B-001) 139453807-139476609 protein_coding
ENST00000507271 (RAB33B-002) 139453232-139454285 processed_transcript
ENSG00000249302 (FTH1P24)
ferritin, heavy polypeptide 1 pseudogene 24 		ENST00000503502 (FTH1P24-001) 139546266-139546727 processed_pseudogene
ENSG00000272717 (RP11-342I1.2)
 ENST00000608402 (RP11-342I1.2-001) 139556799-139557643 antisense
CIL_0004PE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027739-ENSMUSG00000037111 CGP 10090 3:51483966-51560878
GeneTranscriptPositionBiotype
ENSMUSG00000027739 (Rab33b)
RAB33B, member RAS oncogene family 		ENSMUST00000054387 (Rab33b-001) 51483966-51495905 protein_coding
ENSMUSG00000037111 (Setd7)
SET domain containing (lysine methyltransferase) 7 		ENSMUST00000037141 (Setd7-001) 51515319-51560878 protein_coding
ENSMUST00000161755 (Setd7-002) 51535501-51536596 processed_transcript
ENSMUSG00000097885 (5031434O11Rik)
RIKEN cDNA 5031434O11 gene 		ENSMUST00000180404 (5031434O11Rik-201) 51560036-51567114 lincRNA
ENSMUST00000180616 (5031434O11Rik-202) 51559757-51567117 lincRNA
ENSMUST00000181303 (5031434O11Rik-203) 51562471-51567105 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PE_0001ENSG00000145391ENST00000274031ENST00000404104ENST00000406354ENST00000506866ENST00000515101ENST00000608795ENST00000608958ENSG00000172007ENST00000305626ENST00000507271ENSG00000249302ENST00000503502ENSG00000272717ENST00000608402CIL_0004PE_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000037111ENSMUST00000037141ENSMUST00000161755ENSMUSG00000097885ENSMUST00000180404ENSMUST00000180616ENSMUST00000181303
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PE_0001ENSG00000145391ENST00000274031ENST00000608958ENSG00000172007ENST00000305626ENSG00000249302ENST00000503502ENSG00000272717ENST00000608402CIL_0004PE_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000037111ENSMUST00000037141ENSMUSG00000097885ENSMUST00000180404
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145391 ENST00000274031 13.498±0.00 8.172±0.00 0.799±0.00 3.729±2.40 25.361±0.00 9.394±4.38 8.209±5.63 7.137±0.61 8.406±3.26 6.655±0.00 12.373±2.37 3.751±1.49 3.892±1.80 4.093±2.75
ENST00000404104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.878±0.00
ENSG00000172007 ENST00000305626 N/A 2.213±0.00 N/A 2.620±0.13 3.410±0.00 2.478±0.00 1.734±0.00 N/A 2.352±0.00 3.022±0.00 N/A 3.040±0.00 1.783±0.41 N/A
ENST00000507271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249302 ENST00000503502 N/A 0.032±0.00 0.529±0.00 N/A 1.119±0.00 0.387±0.00 0.362±0.00 N/A 0.871±0.00 N/A 1.662±0.00 0.849±0.00 N/A N/A
ENSG00000272717 ENST00000608402 0.060±0.00 0.405±0.00 N/A 0.409±0.00 0.266±0.00 0.212±0.00 0.182±0.03 N/A N/A 0.228±0.00 0.056±0.00 0.203±0.15 0.112±0.03 0.220±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027739 ENSMUST00000054387 6.214±1.00 8.093±0.99 12.798±1.17 4.853±1.47 7.299±2.77 7.073±1.06 2.345±0.17 4.787±0.40 2.378±0.34 10.949±0.70 2.133±0.14 7.924±2.89 6.593±2.13 2.440±1.01
ENSMUSG00000037111 ENSMUST00000037141 19.737±1.60 14.215±0.83 23.785±4.52 6.803±3.91 17.020±2.38 13.816±2.20 11.288±0.55 7.393±0.16 1.441±0.49 15.271±0.30 53.548±1.93 20.090±6.91 8.380±4.94 0.828±0.34
ENSMUST00000161755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097885 ENSMUST00000180404 N/A 3.079±0.12 N/A 1.735±0.06 3.849±0.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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