C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004785-ENSDARG00000004059 CGP 7955 25:33344712-33378850
GeneTranscriptPositionBiotype
ENSDARG00000004059 (galk2)
galactokinase 2 		ENSDART00000012600 (galk2-001) 33369435-33378850 protein_coding
ENSDART00000103351 (galk2-201) 33369458-33378775 protein_coding
ENSDARG00000004785 (cops2)
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 		ENSDART00000006124 (cops2-001) 33344712-33360304 protein_coding
ENSDART00000133872 (cops2-002) 33351106-33360283 protein_coding
CIL_0004QE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166200-ENSG00000156958 CGP 9606 15:49106068-49367869
GeneTranscriptPositionBiotype
ENSG00000156958 (GALK2)
galactokinase 2 		ENST00000327171 (GALK2-001) 49155765-49331882 protein_coding
ENST00000396509 (GALK2-002) 49170204-49328514 protein_coding
ENST00000544523 (GALK2-005) 49170282-49328561 protein_coding
ENST00000558145 (GALK2-015) 49170260-49235897 protein_coding
ENST00000558399 (GALK2-020) 49283706-49367869 protein_coding
ENST00000558775 (GALK2-009) 49155775-49239348 nonsense_mediated_decay
ENST00000558956 (GALK2-012) 49170217-49239270 nonsense_mediated_decay
ENST00000559040 (GALK2-011) 49155801-49226695 processed_transcript
ENST00000559095 (GALK2-014) 49170249-49194210 processed_transcript
ENST00000559208 (GALK2-013) 49170224-49283579 nonsense_mediated_decay
ENST00000559423 (GALK2-017) 49170312-49283718 nonsense_mediated_decay
ENST00000559454 (GALK2-006) 49170478-49328503 protein_coding
ENST00000559580 (GALK2-021) 49292471-49367697 protein_coding
ENST00000559883 (GALK2-007) 49155656-49282067 nonsense_mediated_decay
ENST00000559963 (GALK2-008) 49155759-49239330 nonsense_mediated_decay
ENST00000560031 (GALK2-003) 49170016-49328518 protein_coding
ENST00000560119 (GALK2-004) 49170260-49328529 nonsense_mediated_decay
ENST00000560138 (GALK2-016) 49170283-49292422 protein_coding
ENST00000560528 (GALK2-019) 49319682-49328982 protein_coding
ENST00000560654 (GALK2-022) 49155771-49239330 protein_coding
ENST00000561014 (GALK2-018) 49239220-49319707 processed_transcript
ENST00000561074 (GALK2-010) 49155794-49217297 nonsense_mediated_decay
ENSG00000166200 (COPS2)
COP9 signalosome subunit 2 		ENST00000299259 (COPS2-003) 49127350-49155661 protein_coding
ENST00000388901 (COPS2-001) 49122728-49155652 protein_coding
ENST00000542928 (COPS2-002) 49127536-49155604 protein_coding
ENST00000558545 (COPS2-004) 49139258-49155604 retained_intron
ENST00000558843 (COPS2-006) 49134033-49155590 protein_coding
ENST00000559016 (COPS2-007) 49134135-49137459 retained_intron
ENST00000560240 (COPS2-008) 49106068-49130773 nonsense_mediated_decay
ENST00000561248 (COPS2-005) 49134083-49155604 protein_coding
ENSG00000166262 (FAM227B)
family with sequence similarity 227, member B 		ENST00000299338 (FAM227B-001) 49328391-49620931 protein_coding
ENST00000557892 (FAM227B-005) 49614792-49620816 retained_intron
ENST00000558579 (FAM227B-011) 49576136-49589943 protein_coding
ENST00000558594 (FAM227B-004) 49576494-49620818 protein_coding
ENST00000558615 (FAM227B-010) 49574861-49620822 retained_intron
ENST00000558862 (FAM227B-007) 49589774-49620897 processed_transcript
ENST00000559351 (FAM227B-012) 49489061-49508294 processed_transcript
ENST00000559573 (FAM227B-003) 49326962-49396442 protein_coding
ENST00000559905 (FAM227B-006) 49576741-49620747 protein_coding
ENST00000560246 (FAM227B-008) 49576761-49620809 protein_coding
ENST00000560557 (FAM227B-014) 49328393-49334302 processed_transcript
ENST00000561064 (FAM227B-002) 49422400-49620929 protein_coding
ENST00000561116 (FAM227B-013) 49576560-49615238 nonsense_mediated_decay
ENST00000561319 (FAM227B-009) 49574738-49615171 retained_intron
ENSG00000200120 (Y_RNA)
Y RNA 		ENST00000363250 (Y_RNA.1-312) 49137762-49137863 misc_RNA
ENSG00000243338 (RN7SL307P)
RNA, 7SL, cytoplasmic 307, pseudogene 		ENST00000490342 (RN7SL307P-201) 49198900-49199194 misc_RNA
ENSG00000259467 (NDUFAF4P1)
NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 pseudogene 1 		ENST00000559425 (NDUFAF4P1-001) 49156329-49156847 processed_pseudogene
ENSG00000259531 (RP11-295H24.3)
 ENST00000560489 (RP11-295H24.3-001) 49365124-49366685 processed_pseudogene
ENSG00000259545 (RP11-325E5.4)
 ENST00000560630 (RP11-325E5.4-001) 49177610-49178741 processed_pseudogene
ENSG00000275580 (RP11-295H24.4)
 ENST00000617563 (RP11-295H24.4-001) 49343608-49344254 lincRNA
ENSG00000276593 (RP11-295H24.5)
 ENST00000619930 (RP11-295H24.5-001) 49353485-49354034 sense_intronic
CIL_0004QE_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027206-ENSMUSG00000027207 CGP 10090 2:125830304-125984299
GeneTranscriptPositionBiotype
ENSMUSG00000027206 (Cops2)
COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 		ENSMUST00000028635 (Cops2-002) 125831602-125859139 protein_coding
ENSMUST00000110462 (Cops2-003) 125831599-125859039 protein_coding
ENSMUST00000110463 (Cops2-001) 125830304-125859139 protein_coding
ENSMUST00000139343 (Cops2-004) 125842722-125858996 processed_transcript
ENSMUST00000152683 (Cops2-005) 125849757-125859063 processed_transcript
ENSMUSG00000027209 (Fam227b)
family with sequence similarity 227, member B 		ENSMUST00000110446 (Fam227b-001) 125983483-126152004 protein_coding
ENSMUST00000110448 (Fam227b-201) 125983628-126151984 protein_coding
ENSMUST00000156413 (Fam227b-002) 126003151-126152004 retained_intron
ENSMUST00000178118 (Fam227b-202) 125983628-126146251 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QE_0001ENSDARG00000004059ENSDART00000012600ENSDART00000103351ENSDARG00000004785ENSDART00000006124ENSDART00000133872CIL_0004QE_0002ENSG00000156958ENST00000327171ENST00000396509ENST00000544523ENST00000558145ENST00000558399ENST00000558775ENST00000558956ENST00000559040ENST00000559095ENST00000559208ENST00000559423ENST00000559454ENST00000559580ENST00000559883ENST00000559963ENST00000560031ENST00000560119ENST00000560138ENST00000560528ENST00000560654ENST00000561014ENST00000561074ENSG00000166200ENST00000299259ENST00000388901ENST00000542928ENST00000558545ENST00000558843ENST00000559016ENST00000560240ENST00000561248ENSG00000166262ENST00000299338ENST00000557892ENST00000558579ENST00000558594ENST00000558615ENST00000558862ENST00000559351ENST00000559573ENST00000559905ENST00000560246ENST00000560557ENST00000561064ENST00000561116ENST00000561319ENSG00000200120ENST00000363250ENSG00000243338ENST00000490342ENSG00000259467ENST00000559425ENSG00000259531ENST00000560489ENSG00000259545ENST00000560630ENSG00000275580ENST00000617563ENSG00000276593ENST00000619930CIL_0004QE_0003ENSMUSG00000027206ENSMUST00000028635ENSMUST00000110462ENSMUST00000110463ENSMUST00000139343ENSMUST00000152683ENSMUSG00000027209ENSMUST00000110446ENSMUST00000110448ENSMUST00000156413ENSMUST00000178118
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QE_0001ENSDARG00000004059ENSDART00000012600ENSDART00000103351ENSDARG00000004785ENSDART00000006124ENSDART00000133872CIL_0004QE_0002ENSG00000156958ENST00000327171ENST00000396509ENST00000560031ENSG00000166200ENST00000299259ENST00000388901ENST00000542928ENST00000558843ENSG00000166262ENST00000299338ENSG00000200120ENST00000363250ENSG00000243338ENST00000490342ENSG00000259467ENST00000559425ENSG00000259531ENST00000560489ENSG00000259545ENST00000560630ENSG00000275580ENST00000617563ENSG00000276593ENST00000619930CIL_0004QE_0003ENSMUSG00000027206ENSMUST00000028635ENSMUST00000110462ENSMUST00000110463ENSMUST00000139343ENSMUSG00000027209ENSMUST00000110446
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004059 ENSDART00000012600 N/A N/A N/A 1.589±0.05 N/A N/A 3.252±1.98 2.697±0.45 N/A N/A 0.708±0.00 N/A N/A N/A
ENSDART00000103351 N/A N/A N/A 0.822±0.20 N/A N/A 1.617±0.81 N/A 0.125±0.00 N/A N/A N/A N/A N/A
ENSDARG00000004785 ENSDART00000006124 N/A N/A N/A 27.307±9.42 N/A N/A 12.558±8.62 10.264±6.74 2.516±0.00 N/A 10.242±0.00 N/A N/A N/A
ENSDART00000133872 N/A N/A N/A 15.758±0.09 N/A N/A N/A 1.598±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156958 ENST00000327171 N/A N/A N/A N/A N/A N/A N/A N/A 1.567±0.00 2.404±0.00 N/A 3.474±0.00 N/A N/A
ENST00000396509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.142±0.00 N/A
ENST00000544523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560031 N/A N/A 2.139±0.00 N/A N/A 3.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166200 ENST00000299259 14.159±0.00 4.469±0.00 N/A 5.668±0.18 7.485±1.95 15.541±11.76 9.348±5.96 9.700±4.70 7.842±1.19 13.981±9.56 16.643±12.63 12.728±3.50 6.889±0.57 16.147±4.41
ENST00000388901 3.140±0.00 0.849±0.00 0.852±0.00 2.257±0.00 2.580±0.73 2.513±1.39 2.150±1.04 2.784±0.00 1.914±0.07 2.121±0.00 2.482±1.79 3.292±0.19 1.602±0.49 4.135±0.16
ENST00000542928 9.600±0.00 9.344±0.00 N/A 11.109±0.00 13.403±0.00 23.688±0.00 8.226±0.00 12.553±0.00 N/A N/A 11.701±0.00 9.469±0.00 4.335±0.00 16.222±0.00
ENST00000558545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558843 N/A N/A 5.491±0.00 11.669±0.00 8.982±0.00 5.976±0.00 5.417±0.00 N/A 8.111±0.00 9.792±0.00 4.004±0.00 13.917±0.00 N/A N/A
ENST00000559016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166262 ENST00000299338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.457±0.00
ENST00000557892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200120 ENST00000363250 N/A N/A N/A N/A N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243338 ENST00000490342 N/A 0.217±0.00 N/A N/A 0.077±0.00 N/A 0.181±0.00 N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSG00000259467 ENST00000559425 N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 0.840±0.00 N/A 0.223±0.00
ENSG00000259531 ENST00000560489 0.027±0.00 0.020±0.00 0.156±0.00 N/A 0.078±0.05 N/A 0.033±0.00 0.183±0.00 0.029±0.01 0.728±0.00 0.069±0.00 0.105±0.10 0.042±0.02 0.035±0.00
ENSG00000259545 ENST00000560630 N/A 0.051±0.00 N/A 0.176±0.15 0.099±0.00 0.057±0.03 0.047±0.00 0.692±0.67 N/A 0.068±0.00 N/A 0.634±0.00 N/A 0.163±0.00
ENSG00000275580 ENST00000617563 0.584±0.00 0.425±0.00 N/A 1.093±0.27 1.215±0.59 0.721±0.60 0.108±0.01 0.687±0.00 0.234±0.00 0.179±0.00 0.260±0.00 1.024±0.76 0.116±0.05 0.210±0.02
ENSG00000276593 ENST00000619930 N/A N/A N/A 0.497±0.34 0.215±0.00 0.520±0.49 0.143±0.12 0.115±0.00 0.080±0.00 0.154±0.00 N/A 0.271±0.18 0.090±0.04 0.067±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027206 ENSMUST00000028635 4.218±0.00 N/A 15.688±1.31 14.174±1.80 3.832±0.87 N/A 3.323±1.34 7.321±0.00 11.479±8.68 N/A 15.084±2.37 18.546±2.92 27.294±4.99 11.959±4.31
ENSMUST00000110462 8.371±1.78 N/A N/A N/A 5.475±1.49 N/A 4.626±1.16 10.483±2.35 5.180±0.76 7.233±0.80 4.304±0.00 8.422±1.98 9.567±3.15 9.321±0.53
ENSMUST00000110463 3.968±1.01 N/A 10.073±0.90 10.603±0.79 2.330±0.12 N/A 1.863±0.16 4.135±0.00 10.854±6.13 3.155±0.25 5.517±1.62 9.991±4.02 11.618±2.92 2.396±0.00
ENSMUST00000139343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.621±0.00
ENSMUST00000152683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027209 ENSMUST00000110446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.580±2.87
ENSMUST00000110448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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