C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056640-ENSDARG00000062139 CGP 7955 13:13791276-13865559
GeneTranscriptPositionBiotype
ENSDARG00000056640 (rpia)
ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) 		ENSDART00000079154 (rpia-001) 13791276-13805301 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004QR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053604-ENSMUSG00000031668 CGP 10090 6:70765720-70905245
GeneTranscriptPositionBiotype
ENSMUSG00000031668 (Eif2ak3)
eukaryotic translation initiation factor 2 alpha kinase 3 		ENSMUST00000034093 (Eif2ak3-001) 70844515-70905245 protein_coding
ENSMUST00000159401 (Eif2ak3-003) 70878561-70893436 retained_intron
ENSMUST00000161316 (Eif2ak3-004) 70896764-70900258 retained_intron
ENSMUST00000162950 (Eif2ak3-002) 70844553-70864825 protein_coding
ENSMUSG00000053604 (Rpia)
ribose 5-phosphate isomerase A 		ENSMUST00000066134 (Rpia-001) 70765720-70792232 protein_coding
ENSMUST00000124633 (Rpia-003) 70766273-70773692 processed_transcript
ENSMUST00000129244 (Rpia-002) 70782080-70792003 retained_intron
ENSMUSG00000065750 (Gm23346)
predicted gene, 23346 		ENSMUST00000083816 (Gm23346-201) 70855444-70855579 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QR_0001ENSDARG00000056640ENSDART00000079154CIL_0004QR_0002ENSMUSG00000031668ENSMUST00000034093ENSMUST00000159401ENSMUST00000161316ENSMUST00000162950ENSMUSG00000053604ENSMUST00000066134ENSMUST00000124633ENSMUST00000129244ENSMUSG00000065750ENSMUST00000083816
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QR_0001ENSDARG00000056640ENSDART00000079154CIL_0004QR_0002ENSMUSG00000031668ENSMUST00000034093ENSMUST00000161316ENSMUST00000162950ENSMUSG00000053604ENSMUST00000066134ENSMUST00000124633ENSMUST00000129244ENSMUSG00000065750ENSMUST00000083816
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056640 ENSDART00000079154 N/A N/A N/A 5.876±0.91 N/A N/A 2.403±1.49 4.478±2.92 4.042±0.00 N/A 2.038±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031668 ENSMUST00000034093 5.626±1.23 3.914±1.01 5.204±2.31 6.276±0.33 6.722±0.91 10.723±1.54 1.896±0.46 7.646±0.55 3.302±0.68 8.459±0.39 0.938±0.19 7.814±1.20 14.085±5.35 0.882±0.31
ENSMUST00000159401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161316 N/A N/A N/A 31.647±0.00 N/A N/A N/A N/A N/A N/A N/A 35.427±0.00 74.902±0.00 3.625±0.00
ENSMUST00000162950 N/A 7.753±4.20 N/A N/A 5.446±0.66 5.526±1.37 N/A N/A N/A N/A N/A 5.756±1.30 N/A N/A
ENSMUSG00000053604 ENSMUST00000066134 12.727±1.86 6.035±2.83 13.605±2.64 5.196±2.53 8.433±0.95 7.812±1.30 4.057±0.56 8.204±1.30 17.187±17.67 7.483±0.59 7.114±1.18 9.415±2.32 25.751±13.18 5.607±0.67
ENSMUST00000124633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.994±0.00 19.640±3.77 N/A
ENSMUST00000129244 0.826±0.00 N/A N/A 0.583±0.00 0.693±0.00 N/A N/A N/A 0.275±0.14 0.523±0.00 0.452±0.04 1.373±0.00 N/A 0.711±0.00
ENSMUSG00000065750 ENSMUST00000083816 N/A N/A N/A N/A N/A N/A N/A N/A 22.829±0.00 N/A N/A N/A N/A N/A

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