C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004RJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006042-ENSG00000141316 CGP 9606 17:32927910-32997877
GeneTranscriptPositionBiotype
ENSG00000141316 (SPACA3)
sperm acrosome associated 3
ENST00000269053 (SPACA3-001) 32991869-32997877 protein_coding
ENST00000394637 (SPACA3-004) 32992851-32997877 processed_transcript
ENST00000394638 (SPACA3-003) 32991869-32997877 protein_coding
ENST00000485015 (SPACA3-002) 32991889-32995717 processed_transcript
ENST00000580599 (SPACA3-005) 32970376-32997877 protein_coding
CIL_0004RJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035413-ENSMUSG00000053184 CGP 10090 11:80810175-80867814
GeneTranscriptPositionBiotype
ENSMUSG00000035413 (Tmem98)
transmembrane protein 98
ENSMUST00000040865 (Tmem98-001) 80810175-80822033 protein_coding
ENSMUSG00000053184 (Spaca3)
sperm acrosome associated 3
ENSMUST00000103222 (Spaca3-002) 80858372-80867814 protein_coding
ENSMUST00000103223 (Spaca3-001) 80858365-80867810 protein_coding
ENSMUSG00000081663 (Gm11207)
predicted gene 11207
ENSMUST00000117824 (Gm11207-001) 80822780-80823193 processed_pseudogene
ENSMUSG00000086703 (4930507D10Rik)
RIKEN cDNA 4930507D10 gene
ENSMUST00000137411 (4930507D10Rik-001) 80850381-80858300 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RJ_0001ENSG00000141316ENST00000269053ENST00000394637ENST00000394638ENST00000485015ENST00000580599CIL_0004RJ_0002ENSMUSG00000035413ENSMUST00000040865ENSMUSG00000053184ENSMUST00000103222ENSMUST00000103223ENSMUSG00000081663ENSMUST00000117824ENSMUSG00000086703ENSMUST00000137411
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RJ_0001ENSG00000141316ENST00000269053ENST00000394638ENST00000485015ENST00000580599CIL_0004RJ_0002ENSMUSG00000035413ENSMUST00000040865ENSMUSG00000053184ENSMUST00000103222ENSMUST00000103223ENSMUSG00000081663ENSMUST00000117824ENSMUSG00000086703ENSMUST00000137411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141316 ENST00000269053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.495±22.66
ENST00000394637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394638 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 0.169±0.00 N/A
ENST00000485015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A
ENST00000580599 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A 0.024±0.00 N/A 0.068±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035413 ENSMUST00000040865 29.399±2.53 50.498±7.26 30.892±6.39 9.261±4.70 12.735±2.42 80.050±5.84 13.168±0.89 11.518±1.10 8.763±3.33 35.948±0.90 0.536±0.10 47.313±13.66 6.095±3.90 1.773±0.88
ENSMUSG00000053184 ENSMUST00000103222 N/A N/A 0.011±0.00 0.043±0.01 0.090±0.03 0.207±0.10 0.101±0.06 0.102±0.11 0.032±0.02 0.183±0.14 0.043±0.00 0.185±0.08 0.106±0.04 198.903±76.72
ENSMUST00000103223 N/A N/A N/A N/A N/A 0.106±0.03 N/A N/A N/A N/A N/A 0.071±0.00 0.006±0.00 N/A
ENSMUSG00000081663 ENSMUST00000117824 0.199±0.08 N/A 0.125±0.00 0.075±0.01 N/A 0.234±0.00 N/A 0.116±0.00 N/A 0.150±0.02 N/A 0.662±0.28 N/A 0.126±0.00
ENSMUSG00000086703 ENSMUST00000137411 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.036±0.01 N/A 4.880±2.99

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