C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004SE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154479-ENSG00000144362 CGP 9606 2:169645425-169701708
GeneTranscriptPositionBiotype
ENSG00000144362 (PHOSPHO2)
phosphatase, orphan 2 		ENST00000359744 (PHOSPHO2-001) 169694465-169701708 protein_coding
ENST00000438710 (PHOSPHO2-002) 169694471-169701378 protein_coding
ENST00000438838 (PHOSPHO2-005) 169694471-169701138 protein_coding
ENST00000449906 (PHOSPHO2-003) 169694487-169701118 protein_coding
ENST00000476919 (PHOSPHO2-004) 169695214-169698300 processed_transcript
ENST00000616481 (PHOSPHO2-201) 169694454-169701706 protein_coding
ENST00000616524 (PHOSPHO2-202) 169694454-169701706 protein_coding
ENST00000617738 (PHOSPHO2-203) 169694454-169701706 protein_coding
ENSG00000154479 (CCDC173)
coiled-coil domain containing 173 		ENST00000419478 (CCDC173-002) 169674937-169681324 protein_coding
ENST00000421028 (CCDC173-003) 169662326-169694350 protein_coding
ENST00000447353 (CCDC173-001) 169645425-169694433 protein_coding
ENSG00000213160 (KLHL23)
kelch-like family member 23 		ENST00000272797 (KLHL23-006) 169694491-169749804 protein_coding
ENST00000392647 (KLHL23-001) 169733846-169751888 protein_coding
ENST00000437875 (KLHL23-003) 169735552-169773385 protein_coding
ENST00000448589 (KLHL23-004) 169741493-169776989 protein_coding
ENST00000494387 (KLHL23-002) 169740997-169749500 retained_intron
ENST00000498202 (KLHL23-005) 169694488-169749682 protein_coding
ENST00000602521 (KLHL23-007) 169697393-169749759 protein_coding
ENSG00000226072 (AC016772.4)
 ENST00000444170 (AC016772.4-001) 169658132-169661357 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004SE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070883-ENSMUSG00000027088 CGP 10090 2:69758033-69800005
GeneTranscriptPositionBiotype
ENSMUSG00000027088 (Phospho2)
phosphatase, orphan 2 		ENSMUST00000028494 (Phospho2-001) 69789636-69797223 protein_coding
ENSMUST00000112266 (Phospho2-002) 69789650-69797223 protein_coding
ENSMUST00000128765 (Phospho2-003) 69789712-69800005 processed_transcript
ENSMUST00000131100 (Phospho2-005) 69789660-69792474 processed_transcript
ENSMUST00000151298 (Phospho2-004) 69789623-69795653 protein_coding
ENSMUST00000180290 (Phospho2-201) 69790972-69797222 protein_coding
ENSMUSG00000070883 (Ccdc173)
coiled-coil domain containing 173 		ENSMUST00000094942 (Ccdc173-001) 69758033-69789575 protein_coding
ENSMUST00000148190 (Ccdc173-002) 69780925-69781988 processed_transcript
ENSMUSG00000083007 (Gm13623)
predicted gene 13623 		ENSMUST00000118359 (Gm13623-001) 69766182-69766806 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SE_0001ENSG00000144362ENST00000359744ENST00000438710ENST00000438838ENST00000449906ENST00000476919ENST00000616481ENST00000616524ENST00000617738ENSG00000154479ENST00000419478ENST00000421028ENST00000447353ENSG00000213160ENST00000272797ENST00000392647ENST00000437875ENST00000448589ENST00000494387ENST00000498202ENST00000602521ENSG00000226072ENST00000444170CIL_0004SE_0002ENSMUSG00000027088ENSMUST00000028494ENSMUST00000112266ENSMUST00000128765ENSMUST00000131100ENSMUST00000151298ENSMUST00000180290ENSMUSG00000070883ENSMUST00000094942ENSMUST00000148190ENSMUSG00000083007ENSMUST00000118359
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SE_0001ENSG00000144362ENST00000359744ENST00000438710ENSG00000154479ENST00000419478ENST00000421028ENST00000447353ENSG00000213160ENST00000272797ENST00000392647ENST00000437875ENST00000602521ENSG00000226072ENST00000444170CIL_0004SE_0002ENSMUSG00000027088ENSMUST00000028494ENSMUST00000112266ENSMUST00000131100ENSMUST00000151298ENSMUST00000180290ENSMUSG00000070883ENSMUST00000094942ENSMUST00000148190ENSMUSG00000083007ENSMUST00000118359
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144362 ENST00000359744 2.460±0.00 N/A N/A N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A N/A N/A N/A
ENST00000438710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.308±0.00 N/A N/A N/A
ENST00000438838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154479 ENST00000419478 N/A N/A N/A N/A 0.146±0.00 0.719±0.00 N/A N/A N/A 2.078±0.00 N/A N/A N/A N/A
ENST00000421028 N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A
ENST00000447353 0.009±0.00 N/A 0.017±0.00 0.042±0.00 0.070±0.00 N/A N/A N/A 0.031±0.00 0.274±0.00 N/A 0.451±0.25 0.017±0.00 26.466±21.54
ENSG00000213160 ENST00000272797 N/A N/A 0.868±0.00 N/A 1.427±0.00 1.149±0.00 N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A
ENST00000392647 0.727±0.00 1.190±0.00 N/A 3.858±0.50 2.102±0.33 4.054±2.75 2.596±0.82 1.287±0.21 1.912±1.10 1.590±1.17 1.563±0.00 7.126±3.30 3.002±1.10 4.726±0.00
ENST00000437875 N/A N/A 2.347±0.00 N/A N/A N/A N/A N/A N/A 1.024±0.00 2.461±0.00 N/A N/A N/A
ENST00000448589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602521 N/A N/A N/A N/A N/A N/A N/A 2.323±0.00 N/A N/A N/A 16.396±0.00 N/A N/A
ENSG00000226072 ENST00000444170 N/A 0.056±0.00 N/A 0.007±0.00 0.006±0.00 0.036±0.00 N/A 0.007±0.00 N/A N/A N/A 0.044±0.00 N/A 0.089±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027088 ENSMUST00000028494 1.893±0.59 N/A 4.765±0.51 4.354±1.71 1.455±0.49 N/A 3.405±0.38 2.912±0.92 3.029±1.29 1.411±0.47 4.630±0.99 3.306±1.35 3.416±1.23 58.101±20.50
ENSMUST00000112266 1.042±0.34 N/A 1.125±0.02 1.442±0.00 2.788±0.92 2.829±0.28 1.019±0.18 1.897±0.45 1.938±0.83 1.764±0.29 1.576±1.05 3.017±1.48 0.848±0.24 11.495±0.00
ENSMUST00000128765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131100 7.576±2.46 40.798±23.87 N/A 14.924±1.97 8.439±2.91 6.579±1.44 6.504±0.00 10.241±3.58 7.066±1.61 8.501±0.98 N/A 10.203±4.10 N/A 119.111±29.04
ENSMUST00000151298 3.112±1.01 27.456±17.47 N/A N/A 25.491±4.75 16.731±1.15 2.581±0.00 7.495±6.70 4.710±1.33 8.338±2.65 N/A 18.730±4.69 N/A 60.684±6.77
ENSMUST00000180290 0.649±0.17 N/A 0.678±0.10 N/A 0.619±0.06 N/A 0.510±0.04 0.568±0.00 0.341±0.00 0.775±0.05 N/A 0.555±0.05 N/A N/A
ENSMUSG00000070883 ENSMUST00000094942 0.184±0.03 0.143±0.00 0.529±0.11 1.078±0.48 0.255±0.20 0.200±0.10 0.087±0.02 0.218±0.02 0.129±0.05 0.206±0.05 0.197±0.07 1.124±1.38 0.309±0.22 61.547±87.01
ENSMUST00000148190 0.101±0.00 0.185±0.00 N/A N/A 0.170±0.05 N/A 0.047±0.00 0.055±0.00 N/A 0.203±0.00 0.081±0.00 0.504±0.33 N/A N/A
ENSMUSG00000083007 ENSMUST00000118359 0.127±0.05 0.194±0.08 0.200±0.01 0.109±0.04 0.220±0.04 0.156±0.09 0.068±0.01 0.074±0.02 0.053±0.06 0.135±0.05 N/A 0.478±0.14 0.069±0.05 0.266±0.20

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