C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052104-ENSDARG00000052103 CGP 7955 6:26799028-26817072
GeneTranscriptPositionBiotype
ENSDARG00000052103 (dtymk)
deoxythymidylate kinase (thymidylate kinase) 		ENSDART00000073883 (dtymk-001) 26813190-26817072 protein_coding
ENSDARG00000052104 (atg4b)
ATG4 autophagy related 4 homolog B (S. cerevisiae) 		ENSDART00000121558 (atg4b-001) 26799028-26813241 protein_coding
ENSDART00000154161 (atg4b-002) 26800365-26813174 nonsense_mediated_decay
CIL_0004UA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168397-ENSG00000168393 CGP 9606 2:241637213-241686991
GeneTranscriptPositionBiotype
ENSG00000168393 (DTYMK)
deoxythymidylate kinase (thymidylate kinase) 		ENST00000305784 (DTYMK-001) 241675742-241686991 protein_coding
ENST00000400770 (DTYMK-002) 241675747-241686944 nonsense_mediated_decay
ENST00000420144 (DTYMK-008) 241676178-241685877 protein_coding
ENST00000432348 (DTYMK-004) 241676123-241686742 nonsense_mediated_decay
ENST00000445261 (DTYMK-006) 241676120-241686712 protein_coding
ENST00000464603 (DTYMK-003) 241685116-241686781 retained_intron
ENST00000493095 (DTYMK-005) 241682155-241686725 processed_transcript
ENSG00000168397 (ATG4B)
autophagy related 4B, cysteine peptidase 		ENST00000344376 (ATG4B-005) 241651007-241672592 nonsense_mediated_decay
ENST00000400771 (ATG4B-025) 241637710-241668221 protein_coding
ENST00000400772 (ATG4B-011) 241637626-241655330 nonsense_mediated_decay
ENST00000402096 (ATG4B-006) 241637612-241672628 protein_coding
ENST00000404914 (ATG4B-002) 241637612-241673857 protein_coding
ENST00000405546 (ATG4B-001) 241637213-241673854 protein_coding
ENST00000415107 (ATG4B-022) 241637710-241653524 nonsense_mediated_decay
ENST00000419606 (ATG4B-015) 241637693-241655306 protein_coding
ENST00000425239 (ATG4B-023) 241637707-241659448 protein_coding
ENST00000428861 (ATG4B-027) 241666596-241671366 protein_coding
ENST00000429899 (ATG4B-026) 241653467-241666769 protein_coding
ENST00000430617 (ATG4B-020) 241637729-241659187 protein_coding
ENST00000460211 (ATG4B-028) 241667812-241671569 retained_intron
ENST00000465399 (ATG4B-016) 241637693-241655444 retained_intron
ENST00000468018 (ATG4B-021) 241637697-241659200 retained_intron
ENST00000475195 (ATG4B-014) 241637693-241655002 retained_intron
ENST00000475693 (ATG4B-008) 241668259-241673849 retained_intron
ENST00000479554 (ATG4B-013) 241637693-241654705 retained_intron
ENST00000479941 (ATG4B-030) 241668169-241668860 retained_intron
ENST00000482507 (ATG4B-004) 241637698-241672631 retained_intron
ENST00000483778 (ATG4B-012) 241637662-241659772 retained_intron
ENST00000491867 (ATG4B-010) 241637620-241653333 processed_transcript
ENST00000493618 (ATG4B-024) 241637706-241659611 retained_intron
ENST00000494132 (ATG4B-029) 241670561-241671917 retained_intron
ENST00000494465 (ATG4B-003) 241637635-241672599 retained_intron
CIL_0004UA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026280-ENSMUSG00000026281 CGP 10090 1:93751500-93801934
GeneTranscriptPositionBiotype
ENSMUSG00000026279 (Thap4)
THAP domain containing 4 		ENSMUST00000112905 (Thap4-002) 93705390-93754864 nonsense_mediated_decay
ENSMUST00000187445 (Thap4-004) 93705391-93714982 nonsense_mediated_decay
ENSMUST00000189173 (Thap4-003) 93724649-93754650 retained_intron
ENSMUST00000189472 (Thap4-005) 93714780-93749954 protein_coding
ENSMUST00000189728 (Thap4-006) 93705387-93731926 processed_transcript
ENSMUST00000190116 (Thap4-001) 93701935-93754780 protein_coding
ENSMUSG00000026280 (Atg4b)
autophagy related 4B, cysteine peptidase 		ENSMUST00000027502 (Atg4b-001) 93754905-93790610 protein_coding
ENSMUST00000135762 (Atg4b-002) 93755045-93788179 retained_intron
ENSMUST00000149436 (Atg4b-003) 93751500-93775683 protein_coding
ENSMUST00000185482 (Atg4b-010) 93755035-93784923 nonsense_mediated_decay
ENSMUST00000185754 (Atg4b-008) 93786218-93787899 retained_intron
ENSMUST00000186001 (Atg4b-006) 93768077-93775448 retained_intron
ENSMUST00000186124 (Atg4b-009) 93785583-93786580 retained_intron
ENSMUST00000186811 (Atg4b-011) 93784797-93787877 nonsense_mediated_decay
ENSMUST00000187824 (Atg4b-005) 93754988-93778288 protein_coding
ENSMUST00000189152 (Atg4b-004) 93755162-93768100 processed_transcript
ENSMUST00000189872 (Atg4b-007) 93784343-93785081 retained_intron
ENSMUSG00000026281 (Dtymk)
deoxythymidylate kinase 		ENSMUST00000027503 (Dtymk-001) 93792576-93801934 protein_coding
ENSMUST00000112890 (Dtymk-002) 93800065-93801906 protein_coding
ENSMUST00000112893 (Dtymk-003) 93792724-93799001 protein_coding
ENSMUST00000144106 (Dtymk-004) 93798380-93799361 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UA_0001ENSDARG00000052103ENSDART00000073883ENSDARG00000052104ENSDART00000121558ENSDART00000154161CIL_0004UA_0002ENSG00000168393ENST00000305784ENST00000400770ENST00000420144ENST00000432348ENST00000445261ENST00000464603ENST00000493095ENSG00000168397ENST00000344376ENST00000400771ENST00000400772ENST00000402096ENST00000404914ENST00000405546ENST00000415107ENST00000419606ENST00000425239ENST00000428861ENST00000429899ENST00000430617ENST00000460211ENST00000465399ENST00000468018ENST00000475195ENST00000475693ENST00000479554ENST00000479941ENST00000482507ENST00000483778ENST00000491867ENST00000493618ENST00000494132ENST00000494465CIL_0004UA_0003ENSMUSG00000026279ENSMUST00000112905ENSMUST00000187445ENSMUST00000189173ENSMUST00000189472ENSMUST00000189728ENSMUST00000190116ENSMUSG00000026280ENSMUST00000027502ENSMUST00000135762ENSMUST00000149436ENSMUST00000185482ENSMUST00000185754ENSMUST00000186001ENSMUST00000186124ENSMUST00000186811ENSMUST00000187824ENSMUST00000189152ENSMUST00000189872ENSMUSG00000026281ENSMUST00000027503ENSMUST00000112890ENSMUST00000112893ENSMUST00000144106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UA_0001ENSDARG00000052103ENSDART00000073883ENSDARG00000052104ENSDART00000121558ENSDART00000154161CIL_0004UA_0002ENSG00000168393ENST00000305784ENST00000400770ENST00000420144ENST00000432348ENST00000445261ENST00000464603ENST00000493095ENSG00000168397ENST00000344376ENST00000402096ENST00000404914ENST00000405546ENST00000419606ENST00000465399ENST00000475195ENST00000475693ENST00000482507CIL_0004UA_0003ENSMUSG00000026279ENSMUST00000112905ENSMUST00000189173ENSMUST00000189472ENSMUST00000189728ENSMUST00000190116ENSMUSG00000026280ENSMUST00000027502ENSMUST00000135762ENSMUST00000149436ENSMUST00000185482ENSMUST00000186811ENSMUSG00000026281ENSMUST00000027503ENSMUST00000112890ENSMUST00000112893ENSMUST00000144106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052103 ENSDART00000073883 N/A N/A N/A N/A N/A N/A 2.057±0.31 18.568±0.00 1.310±0.00 N/A 2.172±0.00 N/A N/A N/A
ENSDARG00000052104 ENSDART00000121558 N/A N/A N/A 11.202±1.60 N/A N/A 4.154±0.20 8.903±0.00 0.444±0.00 N/A 4.369±0.00 N/A N/A N/A
ENSDART00000154161 N/A N/A N/A 3.827±0.15 N/A N/A 1.668±0.00 1.729±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168393 ENST00000305784 8.366±0.00 7.918±0.00 N/A 2.599±0.00 8.467±0.00 4.441±3.87 1.467±1.37 6.395±2.79 2.896±2.56 2.096±0.35 0.260±0.04 18.348±12.83 16.845±4.01 6.269±1.33
ENST00000400770 N/A 3.126±0.00 N/A 1.240±0.09 N/A 0.756±0.00 N/A N/A 0.894±0.61 N/A 0.329±0.00 3.991±0.00 N/A N/A
ENST00000420144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.672±0.00 10.208±0.00 N/A
ENST00000432348 N/A 2.664±0.00 N/A 0.640±0.18 N/A N/A N/A N/A N/A N/A 0.244±0.13 N/A N/A N/A
ENST00000445261 N/A N/A 1.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 42.704±0.00 16.201±0.00 10.987±0.00
ENST00000464603 N/A N/A N/A 0.721±0.00 0.554±0.00 0.487±0.00 0.270±0.00 1.351±0.00 0.265±0.00 N/A 0.102±0.00 N/A N/A N/A
ENST00000493095 N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000168397 ENST00000344376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.051±3.49 28.281±0.00
ENST00000400771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000400772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402096 N/A N/A N/A N/A N/A N/A N/A N/A 4.686±0.00 N/A N/A N/A N/A 18.336±0.00
ENST00000404914 N/A 5.561±0.00 1.140±0.00 6.460±3.53 3.419±2.15 5.735±0.00 2.570±1.94 9.526±0.00 2.515±0.48 2.912±0.95 N/A 10.087±5.98 11.383±0.00 N/A
ENST00000405546 N/A N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419606 N/A N/A N/A N/A N/A N/A N/A 2.970±0.00 N/A N/A N/A N/A N/A N/A
ENST00000425239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465399 N/A N/A 8.595±0.00 11.727±0.00 12.513±0.00 9.724±0.00 2.531±0.00 6.200±0.00 9.821±0.00 9.547±0.00 5.485±0.00 6.438±0.00 N/A N/A
ENST00000468018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475195 N/A N/A N/A N/A N/A 6.798±0.00 N/A N/A N/A N/A N/A 5.942±0.00 N/A N/A
ENST00000475693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.242±0.00 N/A N/A N/A
ENST00000479554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482507 N/A 9.252±0.00 N/A N/A N/A N/A N/A 6.630±0.00 3.415±0.00 6.914±0.00 N/A 24.089±11.44 N/A 20.382±0.00
ENST00000483778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026279 ENSMUST00000112905 N/A 3.025±1.45 N/A 1.899±0.73 N/A N/A N/A 3.712±0.00 1.264±0.70 N/A 2.081±0.00 4.974±1.18 5.710±1.15 N/A
ENSMUST00000187445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189173 N/A N/A 4.497±0.00 3.339±0.19 0.922±0.00 N/A N/A N/A 1.578±0.22 1.726±0.32 N/A N/A 4.401±0.00 20.904±0.00
ENSMUST00000189472 4.121±0.80 13.493±1.70 N/A 5.418±0.07 6.664±0.72 12.799±0.00 N/A N/A 2.595±0.46 3.412±0.22 N/A 8.337±2.06 N/A N/A
ENSMUST00000189728 8.151±1.47 N/A 8.443±0.24 8.680±4.53 9.454±1.01 31.586±9.06 12.617±3.16 44.189±10.29 3.174±0.67 4.739±0.70 18.383±2.17 14.409±6.39 33.564±19.16 49.333±8.46
ENSMUST00000190116 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000026280 ENSMUST00000027502 5.623±0.45 6.860±1.54 14.957±3.39 12.981±5.98 3.649±0.78 7.743±1.55 2.664±0.30 5.479±0.90 7.962±4.13 5.199±0.52 3.211±0.39 5.394±1.96 7.334±5.70 3.690±2.31
ENSMUST00000135762 3.382±0.82 7.071±1.35 1.840±0.14 11.245±0.38 4.449±0.81 3.029±0.56 1.169±0.08 1.793±0.50 2.116±0.60 4.132±0.34 0.671±0.06 5.964±2.29 2.182±0.03 2.506±0.28
ENSMUST00000149436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.281±12.09 12.325±0.00
ENSMUST00000185482 N/A 26.195±2.49 9.244±1.25 16.426±0.00 11.756±0.30 13.823±1.75 5.328±0.00 10.799±0.00 9.684±4.04 N/A 4.702±0.86 21.681±2.04 27.845±10.67 7.397±1.83
ENSMUST00000185754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186811 N/A N/A N/A 31.524±0.00 N/A N/A N/A N/A N/A N/A N/A 37.730±0.00 45.426±5.83 11.230±0.00
ENSMUST00000187824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026281 ENSMUST00000027503 9.835±0.65 10.002±0.91 52.513±20.89 14.180±9.28 5.389±0.57 5.337±1.28 3.689±0.59 7.780±1.98 33.655±33.65 4.467±0.24 3.295±0.62 15.379±5.33 20.569±15.17 31.897±10.90
ENSMUST00000112890 12.853±4.12 31.671±4.20 12.367±2.68 27.447±23.15 11.450±4.04 12.973±1.70 4.768±1.03 7.711±0.97 25.699±23.25 8.203±3.80 3.003±0.36 19.675±7.96 16.005±11.32 10.123±4.33
ENSMUST00000112893 N/A N/A 6.506±1.30 5.415±0.93 N/A N/A N/A N/A N/A N/A 1.041±0.18 12.277±1.01 4.813±2.92 1.948±0.00
ENSMUST00000144106 N/A N/A 8.982±2.16 14.692±0.00 N/A N/A N/A N/A 23.146±8.66 N/A N/A 14.090±4.73 N/A N/A

Loading