C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187997-ENSG00000108639 CGP 9606 17:78146353-78173527
GeneTranscriptPositionBiotype
ENSG00000187997 (C17orf99)
chromosome 17 open reading frame 99 		ENST00000340363 (C17orf99-001) 78146353-78166177 protein_coding
ENST00000451352 (C17orf99-002) 78160064-78166155 processed_transcript
ENST00000586029 (C17orf99-005) 78161040-78166135 processed_transcript
ENST00000586246 (C17orf99-006) 78164558-78166154 processed_transcript
ENST00000586999 (C17orf99-004) 78146405-78161073 protein_coding
ENST00000591995 (C17orf99-003) 78146854-78164304 protein_coding
ENSG00000267679 (EIF5AP2)
eukaryotic translation initiation factor 5A pseudogene 2 		ENST00000585668 (EIF5AP2-001) 78157403-78159135 processed_pseudogene
CIL_0004UI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025573-ENSMUSG00000048277 CGP 10090 11:117797660-117814283
GeneTranscriptPositionBiotype
ENSMUSG00000025573 (6030468B19Rik)
RIKEN cDNA 6030468B19 gene 		ENSMUST00000106331 (6030468B19Rik-001) 117797660-117807301 protein_coding
ENSMUSG00000048277 (Syngr2)
synaptogyrin 2 		ENSMUST00000026649 (Syngr2-001) 117809668-117814283 protein_coding
ENSMUST00000120928 (Syngr2-003) 117809696-117814283 protein_coding
ENSMUST00000143852 (Syngr2-002) 117812258-117813118 protein_coding
ENSMUST00000175737 (Syngr2-007) 117809712-117813732 protein_coding
ENSMUST00000176936 (Syngr2-006) 117812991-117813412 retained_intron
ENSMUST00000177131 (Syngr2-005) 117809683-117813826 protein_coding
ENSMUST00000177241 (Syngr2-004) 117809693-117813475 nonsense_mediated_decay
ENSMUSG00000093485 (Gm20708)
predicted gene 20708 		ENSMUST00000132298 (Gm20708-001) 117809668-117839904 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UI_0001ENSG00000187997ENST00000340363ENST00000451352ENST00000586029ENST00000586246ENST00000586999ENST00000591995ENSG00000267679ENST00000585668CIL_0004UI_0002ENSMUSG00000025573ENSMUST00000106331ENSMUSG00000048277ENSMUST00000026649ENSMUST00000120928ENSMUST00000143852ENSMUST00000175737ENSMUST00000176936ENSMUST00000177131ENSMUST00000177241ENSMUSG00000093485ENSMUST00000132298
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UI_0001ENSG00000187997ENST00000340363ENST00000451352ENST00000586029ENST00000586246ENST00000586999ENST00000591995ENSG00000267679ENST00000585668CIL_0004UI_0002ENSMUSG00000025573ENSMUST00000106331ENSMUSG00000048277ENSMUST00000026649ENSMUST00000120928ENSMUST00000177131ENSMUSG00000093485ENSMUST00000132298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187997 ENST00000340363 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000451352 0.108±0.00 0.384±0.00 N/A 0.139±0.00 0.192±0.00 0.135±0.06 0.046±0.00 0.348±0.00 0.098±0.00 0.093±0.00 0.008±0.00 0.182±0.12 N/A 0.123±0.00
ENST00000586029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.06 0.143±0.00 N/A
ENST00000586246 N/A N/A N/A N/A N/A N/A N/A 2.046±0.00 N/A N/A N/A 0.233±0.00 0.212±0.02 N/A
ENST00000586999 N/A N/A N/A 1.260±0.00 N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 0.164±0.00 N/A
ENST00000591995 N/A N/A N/A N/A N/A 0.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267679 ENST00000585668 0.174±0.00 0.127±0.00 N/A 0.083±0.00 0.057±0.00 0.051±0.00 N/A 0.131±0.00 N/A 0.137±0.00 0.016±0.00 0.046±0.01 N/A 0.176±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025573 ENSMUST00000106331 0.064±0.06 0.053±0.01 0.016±0.00 0.082±0.01 0.249±0.09 0.223±0.10 0.047±0.02 0.042±0.01 68.589±57.09 0.144±0.07 0.081±0.05 0.099±0.02 0.496±0.29 N/A
ENSMUSG00000048277 ENSMUST00000026649 49.824±1.76 87.661±7.41 49.029±4.08 5.247±3.56 94.566±35.77 213.686±43.74 83.292±7.83 64.023±1.56 50.213±11.39 85.130±3.08 124.063±6.97 62.157±27.58 46.509±27.78 10.968±5.46
ENSMUST00000120928 N/A N/A N/A N/A 28.470±0.00 N/A N/A N/A N/A N/A N/A 28.440±2.62 N/A N/A
ENSMUST00000143852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.164±0.00 N/A
ENSMUST00000177241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093485 ENSMUST00000132298 N/A N/A N/A 0.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.958±0.00

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