C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004VS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169696-ENSG00000169689 CGP 9606 17:81976807-82024107
GeneTranscriptPositionBiotype
ENSG00000169683 (LRRC45)
leucine rich repeat containing 45 		ENST00000306688 (LRRC45-001) 82023302-82031151 protein_coding
ENST00000577638 (LRRC45-003) 82023922-82025440 protein_coding
ENST00000581227 (LRRC45-005) 82027007-82030632 nonsense_mediated_decay
ENST00000582083 (LRRC45-006) 82028741-82030146 retained_intron
ENST00000583302 (LRRC45-004) 82026806-82029232 retained_intron
ENST00000583383 (LRRC45-002) 82023321-82025425 processed_transcript
ENSG00000169689 (STRA13)
stimulated by retinoic acid 13 		ENST00000306704 (STRA13-001) 82018703-82022918 protein_coding
ENST00000392359 (STRA13-002) 82018703-82022918 protein_coding
ENST00000577379 (STRA13-010) 82018838-82022849 processed_transcript
ENST00000579520 (STRA13-004) 82018702-82024107 protein_coding
ENST00000580090 (STRA13-007) 82018844-82022873 processed_transcript
ENST00000580435 (STRA13-003) 82018703-82022892 protein_coding
ENST00000583767 (STRA13-009) 82018866-82022852 processed_transcript
ENST00000584347 (STRA13-006) 82018801-82022879 protein_coding
ENST00000584514 (STRA13-011) 82018716-82022821 processed_transcript
ENST00000584600 (STRA13-008) 82018703-82022858 protein_coding
ENST00000585091 (STRA13-005) 82019157-82022884 retained_intron
ENSG00000169696 (ASPSCR1)
alveolar soft part sarcoma chromosome region, candidate 1 		ENST00000306729 (ASPSCR1-002) 81977550-82017404 protein_coding
ENST00000306739 (ASPSCR1-001) 81977550-82017406 protein_coding
ENST00000344865 (ASPSCR1-010) 81977602-81996846 nonsense_mediated_decay
ENST00000577733 (ASPSCR1-005) 82004345-82017404 retained_intron
ENST00000578236 (ASPSCR1-006) 82006642-82017404 retained_intron
ENST00000578361 (ASPSCR1-019) 82012084-82017403 retained_intron
ENST00000579684 (ASPSCR1-013) 81977705-81995147 protein_coding
ENST00000580534 (ASPSCR1-003) 81977634-82017404 protein_coding
ENST00000581484 (ASPSCR1-009) 81976807-81996843 protein_coding
ENST00000581608 (ASPSCR1-007) 82007435-82017403 retained_intron
ENST00000581647 (ASPSCR1-012) 81977631-81995150 protein_coding
ENST00000582019 (ASPSCR1-011) 81977899-81983626 protein_coding
ENST00000582355 (ASPSCR1-014) 81995443-82017037 protein_coding
ENST00000582404 (ASPSCR1-021) 82015214-82017404 processed_transcript
ENST00000583142 (ASPSCR1-020) 82012882-82017401 processed_transcript
ENST00000583503 (ASPSCR1-015) 81977641-82010825 nonsense_mediated_decay
ENST00000583693 (ASPSCR1-008) 82013234-82017404 retained_intron
ENST00000583744 (ASPSCR1-018) 82010811-82017403 protein_coding
ENST00000584454 (ASPSCR1-004) 81978186-82017406 nonsense_mediated_decay
ENST00000585140 (ASPSCR1-022) 82016194-82017370 processed_transcript
ENST00000585274 (ASPSCR1-017) 82009486-82017369 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0004VS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025142-ENSMUSG00000025144 CGP 10090 11:120672973-120713738
GeneTranscriptPositionBiotype
ENSMUSG00000025142 (Aspscr1)
alveolar soft part sarcoma chromosome region, candidate 1 (human) 		ENSMUST00000026135 (Aspscr1-001) 120672992-120709447 protein_coding
ENSMUST00000103016 (Aspscr1-002) 120673064-120709444 protein_coding
ENSMUST00000106158 (Aspscr1-201) 120673056-120709444 protein_coding
ENSMUST00000106159 (Aspscr1-202) 120676661-120709444 protein_coding
ENSMUST00000106160 (Aspscr1-009) 120676661-120709442 protein_coding
ENSMUST00000127269 (Aspscr1-005) 120673374-120678453 protein_coding
ENSMUST00000129644 (Aspscr1-010) 120677226-120678445 protein_coding
ENSMUST00000131727 (Aspscr1-007) 120673374-120689167 protein_coding
ENSMUST00000135346 (Aspscr1-004) 120673359-120689171 protein_coding
ENSMUST00000143844 (Aspscr1-017) 120673098-120689068 nonsense_mediated_decay
ENSMUST00000149389 (Aspscr1-003) 120673392-120689127 protein_coding
ENSMUST00000151160 (Aspscr1-011) 120677339-120689297 protein_coding
ENSMUST00000151531 (Aspscr1-013) 120708760-120709447 retained_intron
ENSMUST00000152990 (Aspscr1-012) 120708658-120709442 retained_intron
ENSMUST00000153346 (Aspscr1-006) 120673404-120686701 protein_coding
ENSMUST00000166838 (Aspscr1-008) 120689274-120709443 nonsense_mediated_decay
ENSMUST00000167678 (Aspscr1-019) 120689310-120709241 protein_coding
ENSMUST00000168097 (Aspscr1-022) 120673063-120701564 nonsense_mediated_decay
ENSMUST00000168510 (Aspscr1-023) 120686693-120709443 protein_coding
ENSMUST00000168714 (Aspscr1-018) 120673083-120709072 protein_coding
ENSMUST00000168947 (Aspscr1-020) 120702514-120709444 nonsense_mediated_decay
ENSMUST00000169964 (Aspscr1-014) 120672973-120674346 retained_intron
ENSMUST00000171700 (Aspscr1-015) 120673026-120675982 retained_intron
ENSMUST00000172392 (Aspscr1-021) 120708858-120709445 retained_intron
ENSMUSG00000025144 (Stra13)
stimulated by retinoic acid 13 		ENSMUST00000026137 (Stra13-003) 120710943-120713738 protein_coding
ENSMUST00000055424 (Stra13-001) 120710942-120713738 protein_coding
ENSMUST00000106154 (Stra13-002) 120710942-120713732 protein_coding
ENSMUST00000106155 (Stra13-004) 120710942-120713732 protein_coding
ENSMUST00000128543 (Stra13-005) 120710942-120711983 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004VS_0001ENSG00000169683ENST00000306688ENST00000577638ENST00000581227ENST00000582083ENST00000583302ENSG00000169689ENST00000306704ENST00000392359ENST00000579520ENST00000580090ENST00000580435ENST00000584514ENST00000584600ENSG00000169696ENST00000306729ENST00000306739ENST00000577733ENST00000579684ENST00000580534ENST00000581484ENST00000582019ENST00000582355ENST00000583503ENST00000583693ENST00000583744ENST00000584454CIL_0004VS_0002ENSMUSG00000025142ENSMUST00000026135ENSMUST00000103016ENSMUST00000106158ENSMUST00000106159ENSMUST00000131727ENSMUST00000135346ENSMUST00000166838ENSMUST00000168097ENSMUST00000171700ENSMUSG00000025144ENSMUST00000026137ENSMUST00000055424ENSMUST00000106154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169683 ENST00000306688 2.121±0.00 3.868±0.00 0.106±0.00 1.475±0.58 4.458±0.00 2.270±1.52 0.968±0.82 2.955±2.08 2.352±2.01 4.259±0.00 1.276±0.00 4.674±2.71 6.377±1.14 3.389±0.66
ENST00000577638 N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581227 N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A 0.061±0.00 N/A N/A N/A
ENST00000582083 N/A N/A 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583302 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A
ENST00000583383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169689 ENST00000306704 5.845±0.00 17.294±0.00 N/A 7.123±4.93 9.470±0.00 14.665±0.00 6.457±0.00 21.760±0.00 9.616±0.00 12.883±0.00 6.834±0.00 14.396±1.70 19.847±0.74 16.775±0.00
ENST00000392359 11.225±0.00 7.088±0.00 N/A 5.268±0.00 13.331±0.00 N/A N/A 2.303±0.00 3.852±3.06 8.843±8.09 N/A 9.608±6.65 15.595±0.88 7.087±0.10
ENST00000577379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579520 N/A N/A 0.444±0.00 N/A N/A N/A 0.303±0.00 N/A 0.312±0.00 N/A N/A N/A N/A N/A
ENST00000580090 N/A N/A N/A N/A N/A N/A N/A 2.329±0.00 N/A N/A N/A 0.525±0.00 N/A 7.158±0.00
ENST00000580435 N/A N/A 0.242±0.00 N/A N/A 6.457±0.00 N/A N/A N/A 0.626±0.00 0.205±0.00 1.222±0.00 12.809±0.00 N/A
ENST00000583767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584514 N/A N/A N/A N/A 0.543±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584600 N/A 5.773±0.00 N/A N/A N/A 5.134±3.75 2.010±1.73 10.537±0.00 7.887±0.00 N/A N/A N/A N/A 6.757±0.00
ENST00000585091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169696 ENST00000306729 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000306739 4.116±0.00 8.491±0.00 0.499±0.00 3.199±1.73 4.195±0.00 1.371±0.09 3.366±0.00 5.561±2.92 10.696±0.00 5.128±0.00 14.052±0.00 7.942±3.48 22.380±11.98 10.522±6.41
ENST00000344865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577733 N/A N/A 0.344±0.00 0.422±0.21 0.593±0.32 0.309±0.13 0.310±0.11 0.564±0.34 0.079±0.00 0.223±0.00 N/A 1.247±0.00 N/A N/A
ENST00000578236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A
ENST00000580534 N/A N/A N/A 0.711±0.00 N/A 1.847±0.00 1.325±0.00 4.327±0.00 N/A 1.055±0.79 N/A N/A N/A N/A
ENST00000581484 N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A 1.501±0.00 0.918±0.00 N/A N/A N/A N/A
ENST00000581608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582019 N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A
ENST00000582355 5.799±0.00 6.541±0.00 1.379±0.00 N/A 5.636±5.15 2.484±1.53 N/A 1.992±0.00 0.259±0.00 N/A 3.261±0.00 4.017±2.71 5.758±0.00 15.264±0.00
ENST00000582404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583503 6.453±0.00 N/A 1.383±0.00 N/A N/A 1.532±0.00 N/A N/A N/A N/A N/A 6.310±0.00 8.131±0.00 7.605±0.00
ENST00000583693 N/A 1.321±0.00 N/A N/A 1.472±0.00 N/A N/A N/A N/A 0.862±0.00 N/A 2.030±0.92 N/A N/A
ENST00000583744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.076±0.00 N/A
ENST00000584454 N/A N/A N/A N/A 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025142 ENSMUST00000026135 20.860±3.82 35.441±3.77 17.587±0.93 31.611±2.91 22.605±4.31 25.113±2.42 8.342±1.76 29.122±3.74 23.765±11.09 25.087±1.38 7.582±1.26 28.897±4.99 16.510±2.85 65.585±5.53
ENSMUST00000103016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.992±5.52 N/A
ENSMUST00000106158 N/A N/A N/A N/A N/A N/A 2.732±0.00 N/A 4.149±0.55 N/A 1.890±0.35 N/A 12.809±0.00 18.535±4.80
ENSMUST00000106159 N/A N/A N/A 12.378±0.00 5.847±0.00 N/A N/A N/A N/A N/A 4.132±0.76 24.016±7.36 8.712±2.81 26.334±0.00
ENSMUST00000106160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131727 N/A N/A N/A N/A N/A 26.758±1.82 4.957±0.00 N/A N/A N/A N/A 36.733±0.51 N/A 45.815±2.71
ENSMUST00000135346 16.768±1.25 N/A N/A N/A 17.634±1.28 N/A 4.855±1.62 15.930±1.72 21.415±1.53 N/A N/A 26.840±0.00 N/A N/A
ENSMUST00000143844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166838 N/A N/A N/A 9.314±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.890±4.94 N/A
ENSMUST00000167678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168097 N/A N/A N/A 18.943±0.00 N/A N/A N/A N/A N/A N/A N/A 36.797±2.79 21.067±8.16 133.265±0.00
ENSMUST00000168510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171700 N/A N/A N/A N/A 2.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025144 ENSMUST00000026137 N/A N/A N/A 4.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000055424 31.004±3.43 35.006±8.25 25.902±11.84 10.786±7.42 33.669±12.46 34.817±3.47 8.889±1.65 57.605±1.83 45.916±22.03 29.127±3.28 5.774±0.89 26.251±7.09 21.519±11.65 15.969±7.74
ENSMUST00000106154 11.061±3.25 5.474±0.00 N/A 5.266±3.53 7.619±0.31 3.965±0.00 3.354±0.59 6.619±0.86 3.027±0.42 4.603±0.38 8.001±0.85 4.118±2.34 3.578±2.19 8.397±4.04
ENSMUST00000106155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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