C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004WK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179600-ENSG00000154001 CGP 9606 14:63312835-63543374
GeneTranscriptPositionBiotype
ENSG00000154001 (PPP2R5E)
protein phosphatase 2, regulatory subunit B', epsilon isoform 		ENST00000337537 (PPP2R5E-001) 63371357-63543374 protein_coding
ENST00000422769 (PPP2R5E-201) 63373892-63508238 protein_coding
ENST00000553266 (PPP2R5E-003) 63382056-63543354 processed_transcript
ENST00000555899 (PPP2R5E-008) 63375761-63543298 protein_coding
ENST00000556150 (PPP2R5E-006) 63384531-63453776 processed_transcript
ENST00000556484 (PPP2R5E-004) 63375905-63508238 processed_transcript
ENST00000556878 (PPP2R5E-002) 63451274-63543373 retained_intron
ENSG00000179600 (GPHB5)
glycoprotein hormone beta 5 		ENST00000314140 (GPHB5-201) 63312928-63317849 protein_coding
ENST00000621500 (GPHB5-001) 63312835-63318879 protein_coding
ENSG00000252800 (SCARNA20)
Small Cajal body specific RNA 20 		ENST00000516991 (SCARNA20.1-205) 63479272-63479413 snoRNA
CIL_0004WK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048982-ENSMUSG00000021051 CGP 10090 12:75411720-75596200
GeneTranscriptPositionBiotype
ENSMUSG00000021051 (Ppp2r5e)
protein phosphatase 2, regulatory subunit B', epsilon 		ENSMUST00000021447 (Ppp2r5e-201) 75450883-75596200 protein_coding
ENSMUSG00000048982 (Gphb5)
glycoprotein hormone beta 5 		ENSMUST00000051079 (Gphb5-201) 75411720-75416781 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WK_0001ENSG00000154001ENST00000337537ENST00000422769ENST00000553266ENST00000555899ENST00000556150ENST00000556484ENST00000556878ENSG00000179600ENST00000314140ENST00000621500ENSG00000252800ENST00000516991CIL_0004WK_0002ENSMUSG00000021051ENSMUST00000021447ENSMUSG00000048982ENSMUST00000051079
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WK_0001ENSG00000154001ENST00000337537ENST00000422769ENST00000555899ENST00000556484ENST00000556878ENSG00000179600ENST00000314140ENSG00000252800ENST00000516991CIL_0004WK_0002ENSMUSG00000021051ENSMUST00000021447ENSMUSG00000048982ENSMUST00000051079
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154001 ENST00000337537 5.461±0.00 3.333±0.00 N/A 4.897±0.07 5.211±0.00 4.036±1.14 1.859±0.99 2.193±1.03 1.494±0.25 5.741±0.00 2.449±1.59 4.125±1.10 2.333±0.26 2.862±1.12
ENST00000422769 N/A 1.154±0.00 0.742±0.00 N/A 2.998±0.00 1.929±0.17 1.655±0.34 2.779±1.41 1.762±0.85 1.265±0.00 3.131±0.00 1.860±0.76 1.799±0.47 3.053±0.88
ENST00000553266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555899 N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000556150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556484 N/A N/A 1.441±0.00 N/A 3.155±0.00 3.889±0.00 N/A N/A 2.599±0.00 3.028±0.00 1.295±0.00 4.860±0.00 7.180±0.00 13.861±0.00
ENST00000556878 N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179600 ENST00000314140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A
ENST00000621500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252800 ENST00000516991 N/A N/A N/A N/A 4.792±4.59 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021051 ENSMUST00000021447 3.574±1.15 7.950±5.66 6.556±0.53 7.747±3.08 4.605±1.91 7.205±2.41 3.110±0.44 6.115±1.61 4.172±1.62 6.615±1.55 4.089±0.52 7.363±2.76 6.725±2.38 10.275±2.65
ENSMUSG00000048982 ENSMUST00000051079 0.022±0.00 N/A 0.024±0.00 0.020±0.00 0.071±0.02 0.088±0.01 0.030±0.02 N/A 0.004±0.00 N/A N/A 0.057±0.04 0.003±0.00 0.061±0.00

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