C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000055130-ENSG00000106462 CGP 9606 7:148697914-148884321
GeneTranscriptPositionBiotype
ENSG00000055130 (CUL1)
cullin 1 		ENST00000325222 (CUL1-002) 148698912-148801036 protein_coding
ENST00000409469 (CUL1-001) 148697914-148800582 protein_coding
ENST00000602748 (CUL1-003) 148698645-148801025 protein_coding
ENST00000617797 (CUL1-201) 148729999-148800707 protein_coding
ENSG00000264918 (AC005229.1)
 ENST00000578165 (AC005229.1-201) 148730829-148730928 miRNA
ENSG00000273314 (RP5-1136G13.2)
 ENST00000610085 (RP5-1136G13.2-001) 148696467-148698664 antisense
ENSG00000275586 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000615890 (Metazoa_SRP.1-325) 148876018-148876286 misc_RNA
CIL_0004XU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029686-ENSMUSG00000029687 CGP 10090 6:47453398-47595341
GeneTranscriptPositionBiotype
ENSMUSG00000029686 (Cul1)
cullin 1 		ENSMUST00000031697 (Cul1-001) 47454320-47526139 protein_coding
ENSMUST00000126877 (Cul1-009) 47514809-47526058 processed_transcript
ENSMUST00000143941 (Cul1-003) 47454388-47485177 processed_transcript
ENSMUST00000146200 (Cul1-002) 47453904-47523766 protein_coding
ENSMUST00000146828 (Cul1-004) 47453398-47497237 protein_coding
ENSMUST00000149531 (Cul1-008) 47523564-47525779 processed_transcript
ENSMUST00000151934 (Cul1-010) 47516992-47519779 retained_intron
ENSMUST00000152547 (Cul1-005) 47453492-47484965 protein_coding
ENSMUST00000154201 (Cul1-007) 47519696-47523281 retained_intron
ENSMUST00000154391 (Cul1-006) 47453576-47485193 processed_transcript
ENSMUSG00000029687 (Ezh2)
enhancer of zeste homolog 2 (Drosophila) 		ENSMUST00000081721 (Ezh2-001) 47530274-47595030 protein_coding
ENSMUST00000092648 (Ezh2-010) 47530541-47577660 protein_coding
ENSMUST00000114616 (Ezh2-004) 47530274-47595030 protein_coding
ENSMUST00000114618 (Ezh2-003) 47530274-47595030 protein_coding
ENSMUST00000133043 (Ezh2-002) 47552386-47595341 protein_coding
ENSMUST00000164006 (Ezh2-008) 47540843-47551761 nonsense_mediated_decay
ENSMUST00000165492 (Ezh2-009) 47533742-47545883 retained_intron
ENSMUST00000167278 (Ezh2-007) 47544006-47551761 nonsense_mediated_decay
ENSMUST00000169889 (Ezh2-006) 47545783-47554214 nonsense_mediated_decay
ENSMUST00000170311 (Ezh2-011) 47532630-47540709 retained_intron
ENSMUST00000170327 (Ezh2-005) 47556027-47578010 retained_intron
ENSMUST00000171614 (Ezh2-012) 47532010-47535125 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XU_0001ENSG00000055130ENST00000325222ENST00000409469ENST00000602748ENST00000617797ENSG00000264918ENST00000578165ENSG00000273314ENST00000610085ENSG00000275586ENST00000615890CIL_0004XU_0002ENSMUSG00000029686ENSMUST00000031697ENSMUST00000126877ENSMUST00000143941ENSMUST00000146200ENSMUST00000146828ENSMUST00000149531ENSMUST00000151934ENSMUST00000152547ENSMUST00000154201ENSMUST00000154391ENSMUSG00000029687ENSMUST00000081721ENSMUST00000092648ENSMUST00000114616ENSMUST00000114618ENSMUST00000133043ENSMUST00000164006ENSMUST00000165492ENSMUST00000167278ENSMUST00000169889ENSMUST00000170311ENSMUST00000170327ENSMUST00000171614
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XU_0001ENSG00000055130ENST00000325222ENST00000409469ENST00000602748ENST00000617797ENSG00000264918ENST00000578165ENSG00000273314ENST00000610085ENSG00000275586ENST00000615890CIL_0004XU_0002ENSMUSG00000029686ENSMUST00000031697ENSMUST00000146200ENSMUST00000146828ENSMUST00000149531ENSMUSG00000029687ENSMUST00000081721ENSMUST00000092648ENSMUST00000114616ENSMUST00000114618ENSMUST00000133043ENSMUST00000164006ENSMUST00000165492ENSMUST00000167278ENSMUST00000171614
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055130 ENST00000325222 18.165±0.00 15.436±0.00 1.065±0.00 11.165±7.95 6.533±3.41 9.969±7.04 7.709±6.79 9.784±3.23 6.109±1.99 6.616±3.45 14.042±10.24 12.247±3.88 12.698±0.14 22.088±9.29
ENST00000409469 N/A N/A N/A N/A N/A N/A 2.494±0.00 N/A 4.626±0.00 N/A N/A 1.397±0.00 N/A N/A
ENST00000602748 N/A N/A N/A 5.210±0.00 N/A N/A N/A N/A N/A 2.519±0.00 N/A 3.665±0.56 2.314±0.00 31.775±13.44
ENST00000617797 N/A N/A N/A 2.472±0.00 3.560±1.10 2.521±0.00 N/A N/A N/A 2.328±0.00 N/A 1.290±0.00 3.296±0.00 N/A
ENSG00000264918 ENST00000578165 1.022±0.00 1.882±0.00 N/A 2.010±0.00 2.758±0.00 N/A N/A N/A 2.624±0.00 N/A 2.346±0.00 0.737±0.00 5.397±0.00 0.746±0.00
ENSG00000273314 ENST00000610085 N/A N/A 1.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275586 ENST00000615890 0.071±0.00 0.525±0.00 N/A 0.344±0.00 0.404±0.00 0.291±0.00 N/A 0.328±0.00 1.168±0.00 0.395±0.00 N/A 1.098±0.82 0.137±0.00 0.282±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029686 ENSMUST00000031697 14.421±3.51 14.800±1.80 25.363±4.50 24.121±13.26 11.082±3.11 8.279±3.41 9.585±0.49 15.105±2.85 14.236±6.13 15.947±1.92 20.994±0.70 14.786±9.12 40.008±31.45 12.428±3.03
ENSMUST00000126877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.146±3.13 N/A 6.297±0.00
ENSMUST00000146828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.826±0.00 N/A N/A
ENSMUST00000149531 N/A N/A N/A 29.261±0.00 N/A N/A N/A N/A N/A N/A N/A 43.825±0.00 53.461±0.00 N/A
ENSMUST00000151934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029687 ENSMUST00000081721 1.582±0.67 0.357±0.13 4.223±0.75 23.338±5.08 1.406±0.24 0.817±0.21 0.548±0.24 0.871±0.23 11.582±10.91 1.111±0.35 0.767±0.16 2.080±2.03 10.314±6.51 N/A
ENSMUST00000092648 0.516±0.00 0.239±0.10 N/A 12.031±2.87 N/A 0.791±0.00 0.572±0.01 0.630±0.00 6.551±5.88 N/A N/A 2.213±1.26 4.935±1.90 6.972±0.68
ENSMUST00000114616 1.605±0.00 0.359±0.14 N/A 0.542±0.00 N/A N/A 0.221±0.00 0.400±0.11 0.514±0.20 0.403±0.00 N/A 6.405±0.00 N/A 7.004±0.00
ENSMUST00000114618 N/A N/A N/A N/A N/A 0.573±0.00 N/A 0.321±0.00 N/A N/A 0.419±0.07 0.902±0.54 N/A N/A
ENSMUST00000133043 N/A N/A N/A 1.824±0.00 N/A N/A N/A N/A N/A N/A N/A 15.021±0.00 22.287±16.30 43.733±0.00
ENSMUST00000164006 N/A 0.495±0.07 N/A 4.624±0.00 N/A N/A N/A N/A 0.570±0.00 N/A N/A 44.708±0.00 60.570±39.57 203.576±0.00
ENSMUST00000165492 1.238±0.53 0.380±0.16 3.235±0.00 7.474±7.03 0.962±0.24 1.389±0.51 0.263±0.06 0.406±0.05 2.421±2.30 0.505±0.00 0.226±0.00 1.874±0.86 N/A N/A
ENSMUST00000167278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.383±0.00 49.502±0.00
ENSMUST00000169889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171614 N/A 0.260±0.10 N/A N/A 0.787±0.10 1.028±0.14 0.421±0.00 0.441±0.01 N/A N/A N/A 1.115±0.45 N/A N/A

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