C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149639-ENSG00000101342 CGP 9606 20:36777442-36894235
GeneTranscriptPositionBiotype
ENSG00000101342 (TLDC2)
TBC/LysM-associated domain containing 2 		ENST00000217320 (TLDC2-003) 36876131-36894235 protein_coding
ENST00000436941 (TLDC2-001) 36887455-36894235 protein_coding
ENST00000602922 (TLDC2-004) 36876121-36889863 protein_coding
ENSG00000101347 (SAMHD1)
SAM domain and HD domain 1 		ENST00000262878 (SAMHD1-001) 36890229-36951843 protein_coding
ENST00000465985 (SAMHD1-002) 36897568-36905394 retained_intron
ENSG00000149639 (SOGA1)
suppressor of glucose, autophagy associated 1 		ENST00000237536 (SOGA1-005) 36777442-36863686 protein_coding
ENST00000279034 (SOGA1-003) 36777449-36859873 protein_coding
ENST00000463491 (SOGA1-004) 36828597-36839402 retained_intron
ENST00000465671 (SOGA1-001) 36783782-36816281 nonsense_mediated_decay
ENSG00000242509 (RN7SL156P)
RNA, 7SL, cytoplasmic 156, pseudogene 		ENST00000480334 (RN7SL156P-201) 36870099-36870402 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004XY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055485-ENSMUSG00000074628 CGP 10090 2:157015799-157096482
GeneTranscriptPositionBiotype
ENSMUSG00000055485 (Soga1)
suppressor of glucose, autophagy associated 1 		ENSMUST00000069098 (Soga1-001) 157015799-157079254 protein_coding
ENSMUST00000133571 (Soga1-002) 157037050-157040239 processed_transcript
ENSMUST00000153229 (Soga1-003) 157020870-157027472 processed_transcript
ENSMUSG00000074628 (Tldc2)
TBC/LysM associated domain containing 2 		ENSMUST00000099140 (Tldc2-001) 157088453-157096482 protein_coding
ENSMUST00000166140 (Tldc2-201) 157087055-157096481 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XY_0001ENSG00000101342ENST00000217320ENST00000436941ENST00000602922ENSG00000101347ENST00000262878ENST00000465985ENSG00000149639ENST00000237536ENST00000279034ENST00000463491ENST00000465671ENSG00000242509ENST00000480334CIL_0004XY_0002ENSMUSG00000055485ENSMUST00000069098ENSMUST00000133571ENSMUST00000153229ENSMUSG00000074628ENSMUST00000099140ENSMUST00000166140
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XY_0001ENSG00000101342ENST00000217320ENSG00000101347ENST00000262878ENSG00000149639ENST00000237536ENST00000279034ENST00000465671ENSG00000242509ENST00000480334CIL_0004XY_0002ENSMUSG00000055485ENSMUST00000069098ENSMUSG00000074628ENSMUST00000099140ENSMUST00000166140
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101342 ENST00000217320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.331±0.00 N/A N/A
ENST00000436941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101347 ENST00000262878 34.771±0.00 26.649±0.00 1.085±0.00 5.326±3.08 16.872±0.18 30.275±25.06 12.168±9.44 13.547±9.92 6.843±1.71 13.521±2.62 3.536±2.46 16.636±4.47 17.129±2.17 16.638±10.63
ENST00000465985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149639 ENST00000237536 1.387±0.00 0.424±0.00 0.749±0.00 5.115±0.00 2.481±0.66 1.565±0.30 2.248±1.74 1.276±1.10 1.774±1.62 2.354±0.56 0.682±0.00 3.347±2.19 3.298±0.37 3.335±0.55
ENST00000279034 N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A N/A
ENST00000463491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465671 N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENSG00000242509 ENST00000480334 0.307±0.00 0.195±0.00 N/A 0.579±0.00 N/A 0.062±0.00 0.426±0.00 0.467±0.00 0.059±0.00 0.127±0.00 0.288±0.00 N/A N/A 0.239±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055485 ENSMUST00000069098 N/A 6.366±3.11 N/A 6.750±0.49 2.874±1.61 1.746±0.88 N/A 0.809±0.00 0.741±0.36 6.429±0.00 0.394±0.21 3.567±1.97 6.549±1.76 1.028±0.00
ENSMUST00000133571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074628 ENSMUST00000099140 0.089±0.03 0.146±0.05 0.089±0.00 0.071±0.02 0.151±0.00 N/A 0.063±0.00 1.835±0.23 0.070±0.04 0.075±0.01 N/A 0.203±0.05 0.168±0.11 0.156±0.11
ENSMUST00000166140 N/A N/A N/A N/A N/A 3.767±1.01 0.102±0.00 N/A 0.056±0.00 N/A N/A N/A 0.051±0.00 0.106±0.01

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