C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Y3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045553-ENSDARG00000093007 CGP 7955 25:37030312-37043789
GeneTranscriptPositionBiotype
ENSDARG00000045553 (hsd17b2)
hydroxysteroid (17-beta) dehydrogenase 2 		ENSDART00000066985 (hsd17b2-001) 37030312-37037980 protein_coding
ENSDARG00000045554 (snx20)
sorting nexin 20 		ENSDART00000073434 (snx20-201) 37040009-37047674 protein_coding
ENSDART00000153612 (snx20-001) 37045048-37050603 protein_coding
ENSDART00000153919 (snx20-002) 37045523-37050686 retained_intron
ENSDART00000157334 (snx20-003) 37045599-37050650 nonsense_mediated_decay
ENSDARG00000093007 (mphosph6)
M-phase phosphoprotein 6 		ENSDART00000066987 (mphosph6-001) 37039481-37043789 protein_coding
CIL_0004Y3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000086696-ENSG00000135698 CGP 9606 16:82035004-82170226
GeneTranscriptPositionBiotype
ENSG00000086696 (HSD17B2)
hydroxysteroid (17-beta) dehydrogenase 2 		ENST00000199936 (HSD17B2-001) 82035232-82098534 protein_coding
ENST00000563491 (HSD17B2-003) 82035004-82071070 protein_coding
ENST00000566213 (HSD17B2-004) 82035274-82071076 protein_coding
ENST00000566838 (HSD17B2-005) 82068277-82098534 protein_coding
ENST00000568090 (HSD17B2-007) 82056453-82098341 protein_coding
ENST00000569351 (HSD17B2-006) 82035641-82071981 protein_coding
ENSG00000135698 (MPHOSPH6)
M-phase phosphoprotein 6 		ENST00000258169 (MPHOSPH6-001) 82148162-82170226 protein_coding
ENST00000563100 (MPHOSPH6-007) 82147798-82170193 nonsense_mediated_decay
ENST00000563504 (MPHOSPH6-004) 82148616-82170195 protein_coding
ENST00000566748 (MPHOSPH6-005) 82151167-82170213 retained_intron
ENST00000567729 (MPHOSPH6-003) 82164075-82170218 processed_transcript
ENST00000568016 (MPHOSPH6-008) 82149382-82170215 nonsense_mediated_decay
ENST00000569021 (MPHOSPH6-002) 82163876-82170197 protein_coding
ENST00000569599 (MPHOSPH6-006) 82151084-82170199 retained_intron
ENSG00000260161 (CTD-2588J6.1)
 ENST00000566728 (CTD-2588J6.1-001) 82120638-82121769 processed_pseudogene
ENSG00000261235 (RP11-510J16.5)
 ENST00000561826 (RP11-510J16.5-001) 82044336-82063222 antisense
ENST00000567021 (RP11-510J16.5-002) 82044371-82139631 antisense
ENSG00000263636 (AC138304.1)
 ENST00000577313 (AC138304.1-201) 82111053-82111153 miRNA
CIL_0004Y3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031844-ENSMUSG00000031843 CGP 10090 8:117701946-117801929
GeneTranscriptPositionBiotype
ENSMUSG00000031843 (Mphosph6)
M phase phosphoprotein 6 		ENSMUST00000034303 (Mphosph6-201) 117791645-117801929 protein_coding
ENSMUSG00000031844 (Hsd17b2)
hydroxysteroid (17-beta) dehydrogenase 2 		ENSMUST00000034304 (Hsd17b2-201) 117701946-117759029 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y3_0001ENSDARG00000045553ENSDART00000066985ENSDARG00000045554ENSDART00000073434ENSDART00000153612ENSDART00000153919ENSDART00000157334ENSDARG00000093007ENSDART00000066987CIL_0004Y3_0002ENSG00000086696ENST00000199936ENST00000563491ENST00000566213ENST00000566838ENST00000568090ENST00000569351ENSG00000135698ENST00000258169ENST00000563100ENST00000563504ENST00000566748ENST00000567729ENST00000568016ENST00000569021ENST00000569599ENSG00000260161ENST00000566728ENSG00000261235ENST00000561826ENST00000567021ENSG00000263636ENST00000577313CIL_0004Y3_0003ENSMUSG00000031843ENSMUST00000034303ENSMUSG00000031844ENSMUST00000034304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y3_0001ENSDARG00000045553ENSDART00000066985ENSDARG00000045554ENSDART00000073434ENSDARG00000093007ENSDART00000066987CIL_0004Y3_0002ENSG00000086696ENST00000199936ENST00000563491ENST00000566838ENST00000568090ENSG00000135698ENST00000258169ENST00000563100ENST00000563504ENST00000567729ENST00000568016ENST00000569021ENSG00000260161ENST00000566728ENSG00000261235ENST00000561826ENST00000567021ENSG00000263636ENST00000577313CIL_0004Y3_0003ENSMUSG00000031843ENSMUST00000034303ENSMUSG00000031844ENSMUST00000034304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045553 ENSDART00000066985 N/A N/A N/A 0.335±0.03 N/A N/A 0.144±0.09 0.619±0.00 0.038±0.00 N/A 0.057±0.00 N/A N/A N/A
ENSDARG00000045554 ENSDART00000073434 N/A N/A N/A 7.198±0.00 N/A N/A 1.282±0.00 2.953±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000153612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000093007 ENSDART00000066987 N/A N/A N/A 7.480±0.51 N/A N/A 4.187±0.00 7.944±6.24 1.317±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086696 ENST00000199936 0.153±0.00 N/A N/A N/A 1.269±0.51 4.615±1.59 N/A 10.501±9.61 22.867±20.82 1.997±0.00 N/A 3.474±4.57 269.878±123.11 N/A
ENST00000563491 N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566838 0.022±0.00 0.057±0.00 0.185±0.00 0.036±0.00 0.054±0.00 0.274±0.00 0.020±0.00 N/A N/A 0.074±0.03 0.016±0.01 0.096±0.09 N/A 0.026±0.01
ENST00000568090 0.178±0.00 N/A N/A N/A 1.189±0.00 3.503±0.00 N/A 1.267±0.00 30.857±0.00 0.936±0.00 N/A N/A N/A N/A
ENST00000569351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135698 ENST00000258169 3.982±0.00 5.730±0.00 0.565±0.00 4.052±0.43 3.325±2.25 3.336±2.18 1.551±0.85 4.194±3.84 3.039±1.94 1.628±0.00 0.547±0.00 6.118±3.57 4.648±1.44 7.784±0.00
ENST00000563100 N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A N/A 1.536±0.00 N/A N/A N/A N/A
ENST00000563504 2.279±0.00 N/A N/A 2.443±0.00 2.844±0.00 3.138±0.00 0.786±0.00 0.227±0.00 N/A 1.385±0.00 0.852±0.00 9.973±0.00 4.862±0.00 N/A
ENST00000566748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567729 N/A N/A 0.643±0.00 N/A N/A N/A N/A 1.569±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568016 N/A N/A 0.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569021 N/A N/A N/A N/A 2.665±0.00 N/A 0.863±0.00 0.686±0.00 N/A 3.058±0.00 N/A N/A N/A N/A
ENST00000569599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260161 ENST00000566728 N/A 0.043±0.00 0.165±0.00 N/A N/A N/A N/A N/A 0.045±0.03 N/A N/A N/A N/A 0.139±0.00
ENSG00000261235 ENST00000561826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.11
ENST00000567021 N/A N/A N/A N/A N/A 1.624±0.00 N/A 0.529±0.00 14.753±0.00 0.622±0.00 N/A 4.373±0.00 N/A 0.086±0.00
ENSG00000263636 ENST00000577313 N/A 0.260±0.00 N/A N/A 1.088±0.00 N/A N/A 0.272±0.00 N/A N/A N/A 54.735±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031843 ENSMUST00000034303 3.107±1.19 1.133±0.66 6.385±1.41 10.498±6.84 2.294±1.57 1.450±0.28 2.223±0.37 2.483±0.70 7.203±6.77 4.969±1.14 2.288±0.55 10.678±17.18 50.854±42.91 9.279±11.06
ENSMUSG00000031844 ENSMUST00000034304 0.209±0.04 0.218±0.12 15.568±4.09 0.035±0.01 0.243±0.11 141.922±41.13 N/A 1.735±0.50 101.563±57.71 1.671±1.10 0.043±0.00 3.623±1.53 105.251±38.05 0.269±0.17

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