C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042272-ENSDARG00000061357 CGP 7955 25:35908825-35934601
GeneTranscriptPositionBiotype
ENSDARG00000027200 (gabarapl2)
GABA(A) receptor-associated protein-like 2 		ENSDART00000039485 (gabarapl2-001) 35899263-35909012 protein_coding
ENSDARG00000042272 (tmem231)
transmembrane protein 231 		ENSDART00000061996 (tmem231-001) 35908825-35923529 protein_coding
ENSDART00000145416 (tmem231-002) 35909179-35923243 protein_coding
ENSDARG00000061357 (CHST5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENSDART00000149782 (CHST5-001) 35925935-35934601 protein_coding
CIL_0004YE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000260092-ENSG00000260092 CGP 9606 16:75528532-75545428
GeneTranscriptPositionBiotype
ENSG00000135702 (CHST5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENST00000336257 (CHST5-001) 75528535-75535170 protein_coding
ENST00000565039 (CHST5-002) 75530105-75535247 protein_coding
ENSG00000205084 (TMEM231)
transmembrane protein 231 		ENST00000258173 (TMEM231-001) 75536744-75556286 protein_coding
ENST00000561809 (TMEM231-008) 75545977-75556262 retained_intron
ENST00000562410 (TMEM231-002) 75538136-75556268 nonsense_mediated_decay
ENST00000564318 (TMEM231-007) 75538350-75542044 retained_intron
ENST00000564576 (TMEM231-010) 75541374-75556245 processed_transcript
ENST00000565067 (TMEM231-004) 75539754-75556240 protein_coding
ENST00000568377 (TMEM231-005) 75538151-75556238 protein_coding
ENST00000569294 (TMEM231-009) 75540121-75555271 processed_transcript
ENST00000570006 (TMEM231-006) 75540009-75556233 nonsense_mediated_decay
ENST00000615437 (TMEM231-011) 75554923-75555925 protein_coding
ENSG00000260092 (RP11-77K12.7)
 ENST00000460606 (RP11-77K12.7-001) 75528532-75545428 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YE_0001ENSDARG00000027200ENSDART00000039485ENSDARG00000042272ENSDART00000061996ENSDART00000145416ENSDARG00000061357ENSDART00000149782CIL_0004YE_0002ENSG00000135702ENST00000336257ENST00000565039ENSG00000205084ENST00000258173ENST00000561809ENST00000562410ENST00000564318ENST00000564576ENST00000565067ENST00000568377ENST00000569294ENST00000570006ENST00000615437ENSG00000260092ENST00000460606
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YE_0001ENSDARG00000027200ENSDART00000039485ENSDARG00000042272ENSDART00000061996ENSDARG00000061357ENSDART00000149782CIL_0004YE_0002ENSG00000135702ENST00000336257ENSG00000205084ENST00000258173ENST00000562410ENST00000564318ENST00000568377ENSG00000260092ENST00000460606
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027200 ENSDART00000039485 N/A N/A N/A 69.992±39.48 N/A N/A 34.097±27.50 15.207±10.42 4.407±0.00 N/A 38.397±0.00 N/A N/A N/A
ENSDARG00000042272 ENSDART00000061996 N/A N/A N/A N/A N/A N/A N/A 2.264±1.45 N/A N/A N/A N/A N/A N/A
ENSDART00000145416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061357 ENSDART00000149782 N/A N/A N/A 0.654±0.41 N/A N/A 0.221±0.00 1.744±0.00 0.056±0.00 N/A 0.369±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135702 ENST00000336257 N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205084 ENST00000258173 N/A N/A N/A N/A 0.789±0.00 0.604±0.00 N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A
ENST00000561809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562410 N/A N/A 0.720±0.00 N/A N/A 1.607±0.00 N/A N/A N/A 3.801±0.00 N/A N/A N/A N/A
ENST00000564318 N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A 0.253±0.00 0.720±0.00 N/A N/A
ENST00000564576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568377 1.992±0.00 1.869±0.00 N/A 3.514±1.09 1.705±0.00 N/A 1.180±0.00 2.570±0.00 0.768±0.00 4.876±3.63 0.332±0.00 6.127±3.77 2.433±0.26 7.033±1.47
ENST00000569294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260092 ENST00000460606 N/A N/A N/A N/A N/A 3.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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