C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032532-ENSDARG00000061635 CGP 7955 18:37322598-37479503
GeneTranscriptPositionBiotype
ENSDARG00000032532 (arpp19a)
cAMP-regulated phosphoprotein 19a 		ENSDART00000041597 (arpp19a-001) 37322598-37334953 protein_coding
ENSDARG00000061635 (myo5aa)
myosin VAa 		ENSDART00000088037 (myo5aa-201) 37337381-37479503 protein_coding
ENSDART00000133618 (myo5aa-001) 37337423-37479470 protein_coding
ENSDART00000148428 (myo5aa-004) 37465706-37473956 protein_coding
ENSDART00000148541 (myo5aa-003) 37337381-37479490 protein_coding
ENSDART00000149059 (myo5aa-005) 37423209-37432056 processed_transcript
CIL_0004YK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007656-ENSMUSG00000034593 CGP 10090 9:75037614-75223688
GeneTranscriptPositionBiotype
ENSMUSG00000007656 (Arpp19)
cAMP-regulated phosphoprotein 19 		ENSMUST00000007800 (Arpp19-007) 75037718-75060313 protein_coding
ENSMUST00000164467 (Arpp19-009) 75037679-75057710 nonsense_mediated_decay
ENSMUST00000166549 (Arpp19-005) 75052051-75058076 protein_coding
ENSMUST00000167885 (Arpp19-002) 75037819-75056822 protein_coding
ENSMUST00000168166 (Arpp19-001) 75037614-75060294 protein_coding
ENSMUST00000168301 (Arpp19-008) 75037749-75056893 protein_coding
ENSMUST00000169188 (Arpp19-003) 75037917-75056805 protein_coding
ENSMUST00000169448 (Arpp19-006) 75037677-75038473 retained_intron
ENSMUST00000169492 (Arpp19-201) 75037614-75060313 protein_coding
ENSMUST00000170308 (Arpp19-010) 75037677-75056838 protein_coding
ENSMUST00000170310 (Arpp19-004) 75051977-75057383 protein_coding
ENSMUSG00000034593 (Myo5a)
myosin VA 		ENSMUST00000123128 (Myo5a-001) 75071188-75223688 protein_coding
ENSMUST00000123531 (Myo5a-010) 75071565-75176557 nonsense_mediated_decay
ENSMUST00000129281 (Myo5a-007) 75185895-75196200 protein_coding
ENSMUST00000130384 (Myo5a-013) 75185996-75201319 protein_coding
ENSMUST00000136604 (Myo5a-002) 75184184-75218484 processed_transcript
ENSMUST00000136731 (Myo5a-009) 75071600-75218953 protein_coding
ENSMUST00000136871 (Myo5a-006) 75071206-75131008 retained_intron
ENSMUST00000142181 (Myo5a-008) 75140699-75147297 retained_intron
ENSMUST00000143355 (Myo5a-014) 75189939-75192992 retained_intron
ENSMUST00000148144 (Myo5a-011) 75185994-75217993 protein_coding
ENSMUST00000149032 (Myo5a-012) 75184247-75194100 retained_intron
ENSMUST00000149823 (Myo5a-005) 75071015-75117308 retained_intron
ENSMUST00000153404 (Myo5a-004) 75193773-75203752 retained_intron
ENSMUST00000155282 (Myo5a-003) 75071386-75218550 protein_coding
ENSMUSG00000089651 (Gm16353)
predicted gene 16353 		ENSMUST00000159458 (Gm16353-001) 75132959-75134181 processed_pseudogene
ENSMUSG00000090001 (Gm9719)
predicted gene 9719 		ENSMUST00000162765 (Gm9719-001) 75098598-75099140 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YK_0001ENSDARG00000032532ENSDART00000041597ENSDARG00000061635ENSDART00000088037ENSDART00000133618ENSDART00000148428ENSDART00000148541ENSDART00000149059CIL_0004YK_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YK_0001ENSDARG00000032532ENSDART00000041597ENSDARG00000061635ENSDART00000088037ENSDART00000133618ENSDART00000148428ENSDART00000149059CIL_0004YK_0002ENSMUSG00000007656ENSMUST00000007800ENSMUST00000164467ENSMUST00000166549ENSMUST00000168166ENSMUST00000168301ENSMUST00000169448ENSMUST00000169492ENSMUST00000170308ENSMUST00000170310ENSMUSG00000034593ENSMUST00000123128ENSMUST00000123531ENSMUST00000129281ENSMUST00000136731ENSMUST00000148144ENSMUST00000149032ENSMUST00000155282ENSMUSG00000089651ENSMUST00000159458ENSMUSG00000090001ENSMUST00000162765
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032532 ENSDART00000041597 N/A N/A N/A 24.568±7.27 N/A N/A 14.968±4.82 8.333±2.33 0.609±0.00 N/A 3.219±0.00 N/A N/A N/A
ENSDARG00000061635 ENSDART00000088037 N/A N/A N/A N/A N/A N/A 0.049±0.00 0.119±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000133618 N/A N/A N/A N/A N/A N/A 0.050±0.00 0.222±0.00 0.017±0.00 N/A N/A N/A N/A N/A
ENSDART00000148428 N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A
ENSDART00000148541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149059 N/A N/A N/A N/A N/A N/A N/A 0.411±0.00 0.032±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007656 ENSMUST00000007800 3.508±1.21 5.644±2.21 N/A 3.502±0.07 4.615±1.33 8.169±1.48 2.445±0.27 5.888±1.20 2.490±1.13 2.720±1.15 2.700±0.68 4.988±1.01 3.219±1.15 3.004±0.11
ENSMUST00000164467 N/A N/A N/A N/A N/A N/A N/A N/A 9.433±4.09 N/A 7.415±1.51 N/A 11.175±2.81 N/A
ENSMUST00000166549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.249±1.12 N/A N/A
ENSMUST00000167885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168166 6.146±2.37 4.624±0.00 N/A 11.707±0.00 1.684±0.31 N/A 3.627±0.09 3.626±1.32 2.209±1.50 5.392±1.08 2.479±0.85 2.643±1.46 2.729±0.26 N/A
ENSMUST00000168301 N/A 30.369±14.01 N/A N/A N/A 8.875±3.68 N/A N/A 6.118±1.44 N/A N/A 6.224±0.00 N/A N/A
ENSMUST00000169188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.644±0.00
ENSMUST00000169492 3.823±0.00 N/A 15.228±0.08 15.901±4.17 N/A N/A 4.444±1.15 N/A 4.085±0.63 N/A N/A 2.946±0.62 4.576±1.68 0.689±0.00
ENSMUST00000170308 N/A N/A N/A 82.821±0.00 N/A N/A N/A N/A 27.732±12.32 N/A 31.138±4.00 83.398±17.95 114.352±78.07 80.080±0.00
ENSMUST00000170310 4.469±0.00 N/A N/A 50.570±0.00 5.345±0.26 N/A 6.983±1.96 N/A N/A N/A 6.431±1.47 8.550±4.93 12.612±4.07 3.538±0.00
ENSMUSG00000034593 ENSMUST00000123128 2.014±1.05 1.174±0.07 1.454±0.45 7.512±1.77 1.945±0.64 0.368±0.14 0.185±0.07 N/A 0.139±0.13 0.473±0.16 0.265±0.00 1.374±0.30 0.286±0.06 1.067±0.76
ENSMUST00000123531 N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A 0.074±0.00 1.223±0.00 N/A N/A N/A N/A
ENSMUST00000129281 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A
ENSMUST00000130384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136731 N/A N/A N/A 15.609±0.00 N/A N/A 0.255±0.02 1.326±0.02 0.159±0.00 N/A N/A 2.411±0.00 2.528±1.00 N/A
ENSMUST00000136871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148144 N/A N/A N/A N/A N/A N/A N/A 7.920±1.75 0.104±0.04 N/A N/A N/A N/A N/A
ENSMUST00000149032 N/A N/A N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A N/A N/A
ENSMUST00000149823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155282 1.505±0.33 N/A 1.460±0.09 N/A N/A N/A N/A N/A 0.298±0.12 N/A 0.277±0.09 2.813±0.91 1.538±0.62 1.374±0.00
ENSMUSG00000089651 ENSMUST00000159458 0.282±0.00 0.163±0.00 0.108±0.00 0.566±0.33 0.123±0.05 N/A 0.068±0.00 0.064±0.03 0.027±0.00 0.084±0.02 0.025±0.00 0.135±0.14 0.067±0.03 0.067±0.02
ENSMUSG00000090001 ENSMUST00000162765 0.128±0.02 0.269±0.00 0.052±0.03 N/A 0.234±0.13 0.344±0.14 N/A N/A 0.016±0.00 0.133±0.00 N/A 0.504±0.00 0.068±0.01 0.214±0.00

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