C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000534_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000066455-ENSG00000100604 CGP 9606 14:92794231-92935293
GeneTranscriptPositionBiotype
ENSG00000066455 (GOLGA5)
golgin A5 		ENST00000163416 (GOLGA5-001) 92794231-92839963 protein_coding
ENST00000554700 (GOLGA5-003) 92833126-92839796 protein_coding
ENST00000555793 (GOLGA5-004) 92809384-92810703 retained_intron
ENSG00000100604 (CHGA)
chromogranin A (parathyroid secretory protein 1) 		ENST00000216492 (CHGA-001) 92923080-92935293 protein_coding
ENST00000334654 (CHGA-003) 92923176-92935253 protein_coding
ENST00000553866 (CHGA-005) 92923363-92932268 processed_transcript
ENST00000556076 (CHGA-004) 92923157-92931681 nonsense_mediated_decay
ENST00000556098 (CHGA-006) 92926101-92927589 retained_intron
ENST00000556876 (CHGA-007) 92931677-92933255 retained_intron
ENSG00000258499 (RP11-862G15.2)
 ENST00000555299 (RP11-862G15.2-001) 92905697-92907482 lincRNA
ENSG00000258742 (RP11-862G15.1)
 ENST00000553485 (RP11-862G15.1-004) 92891617-92893026 lincRNA
ENST00000554653 (RP11-862G15.1-002) 92886352-92893026 lincRNA
ENST00000556466 (RP11-862G15.1-003) 92891609-92893026 lincRNA
ENST00000557689 (RP11-862G15.1-001) 92891424-92893506 lincRNA
CIL_000534_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021192-ENSMUSG00000021194 CGP 10090 12:102469134-102565027
GeneTranscriptPositionBiotype
ENSMUSG00000021192 (Golga5)
golgi autoantigen, golgin subfamily a, 5 		ENSMUST00000021609 (Golga5-201) 102469910-102497902 protein_coding
ENSMUST00000179218 (Golga5-202) 102469134-102497902 protein_coding
ENSMUSG00000021194 (Chga)
chromogranin A 		ENSMUST00000021610 (Chga-201) 102554969-102565027 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000534_0001ENSG00000066455ENST00000163416ENST00000554700ENST00000555793ENSG00000100604ENST00000216492ENST00000334654ENST00000553866ENST00000556076ENST00000556098ENST00000556876ENSG00000258499ENST00000555299ENSG00000258742ENST00000553485ENST00000554653ENST00000556466ENST00000557689CIL_000534_0002ENSMUSG00000021192ENSMUST00000021609ENSMUST00000179218ENSMUSG00000021194ENSMUST00000021610
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000534_0001ENSG00000066455ENST00000163416ENST00000554700ENST00000555793ENSG00000100604ENST00000216492ENST00000334654ENST00000553866ENST00000556076ENST00000556098ENST00000556876ENSG00000258499ENST00000555299ENSG00000258742ENST00000553485ENST00000554653ENST00000557689CIL_000534_0002ENSMUSG00000021192ENSMUST00000021609ENSMUST00000179218ENSMUSG00000021194ENSMUST00000021610
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066455 ENST00000163416 11.825±0.00 7.837±0.00 2.393±0.00 5.534±3.84 5.139±0.34 4.605±1.23 2.330±0.58 7.888±3.31 7.239±3.41 3.326±1.45 2.657±1.64 10.105±3.58 8.770±3.02 11.878±6.48
ENST00000554700 N/A 3.581±0.00 N/A N/A N/A 4.013±0.00 N/A 5.545±0.00 10.044±0.00 2.539±0.00 N/A 5.284±0.00 N/A 8.934±0.00
ENST00000555793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.900±0.00 N/A N/A N/A
ENSG00000100604 ENST00000216492 0.291±0.00 N/A N/A 66.531±48.55 0.045±0.00 7.437±0.00 N/A N/A N/A N/A N/A 1.164±0.40 0.078±0.01 35.035±21.03
ENST00000334654 N/A N/A N/A 30.426±26.23 0.119±0.01 3.568±0.47 N/A 0.175±0.00 N/A 0.379±0.00 0.106±0.00 0.564±0.15 N/A 16.269±10.56
ENST00000553866 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A 0.158±0.00 N/A
ENST00000556076 N/A N/A N/A N/A 0.143±0.00 N/A 0.065±0.00 N/A 0.113±0.00 N/A 0.065±0.00 N/A N/A N/A
ENST00000556098 N/A 0.180±0.00 N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556876 N/A 0.115±0.00 N/A N/A N/A N/A 0.071±0.00 N/A 0.065±0.00 N/A N/A 0.330±0.00 0.109±0.00 N/A
ENSG00000258499 ENST00000555299 N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A 0.021±0.01
ENSG00000258742 ENST00000553485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.998±0.00
ENST00000554653 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A 2.580±0.00
ENST00000556466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557689 0.019±0.00 N/A N/A 0.034±0.00 0.020±0.00 N/A N/A N/A 0.022±0.00 0.006±0.00 N/A 0.022±0.00 N/A 0.361±0.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021192 ENSMUST00000021609 2.720±0.00 N/A N/A 3.105±2.20 5.662±0.00 N/A 1.236±0.00 N/A 1.294±0.00 N/A 2.077±1.01 6.993±6.84 20.327±1.96 N/A
ENSMUST00000179218 7.889±2.01 4.129±1.23 15.676±2.43 10.589±3.67 5.690±0.29 8.502±0.61 5.703±0.71 8.523±0.59 6.646±1.88 7.726±0.53 6.759±2.04 9.169±9.64 24.799±11.00 20.192±0.94
ENSMUSG00000021194 ENSMUST00000021610 0.096±0.06 996.885±221.39 0.129±0.03 68.712±69.34 0.060±0.02 46.175±10.67 0.045±0.02 0.228±0.12 0.472±0.45 0.209±0.09 0.061±0.03 0.703±0.17 0.256±0.17 4.656±0.90

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