C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000548_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184584-ENSG00000131508 CGP 9606 5:139475534-139628433
GeneTranscriptPositionBiotype
ENSG00000131508 (UBE2D2)
ubiquitin-conjugating enzyme E2D 2 		ENST00000253815 (UBE2D2-201) 139599562-139626801 protein_coding
ENST00000398733 (UBE2D2-001) 139561166-139628433 protein_coding
ENST00000398734 (UBE2D2-004) 139561726-139627686 nonsense_mediated_decay
ENST00000505007 (UBE2D2-003) 139561167-139623444 protein_coding
ENST00000505548 (UBE2D2-002) 139562029-139627115 protein_coding
ENST00000510470 (UBE2D2-007) 139561724-139614685 retained_intron
ENST00000511691 (UBE2D2-008) 139600404-139623662 retained_intron
ENST00000511725 (UBE2D2-006) 139526431-139626855 protein_coding
ENSG00000184584 (TMEM173)
transmembrane protein 173 		ENST00000330794 (TMEM173-001) 139475964-139482790 protein_coding
ENST00000502362 (TMEM173-007) 139481246-139482310 retained_intron
ENST00000502825 (TMEM173-013) 139477483-139481087 retained_intron
ENST00000503287 (TMEM173-010) 139476345-139481461 retained_intron
ENST00000503838 (TMEM173-012) 139479170-139481349 retained_intron
ENST00000507297 (TMEM173-002) 139475534-139482698 retained_intron
ENST00000509573 (TMEM173-014) 139476026-139481368 retained_intron
ENST00000510817 (TMEM173-006) 139478270-139482351 protein_coding
ENST00000511850 (TMEM173-011) 139478462-139482296 processed_transcript
ENST00000511886 (TMEM173-008) 139477455-139482689 processed_transcript
ENST00000512606 (TMEM173-015) 139476301-139481629 processed_transcript
ENST00000514119 (TMEM173-005) 139478352-139482758 retained_intron
ENST00000514348 (TMEM173-003) 139481419-139482935 retained_intron
ENST00000514542 (TMEM173-004) 139481846-139482720 processed_transcript
ENST00000515507 (TMEM173-016) 139478368-139482310 processed_transcript
ENSG00000249215 (AC138517.4)
 ENST00000513338 (AC138517.4-001) 139494256-139496116 processed_pseudogene
ENSG00000249689 (AC138517.5)
 ENST00000515724 (AC138517.5-001) 139492538-139493105 processed_pseudogene
ENSG00000275506 (CTD-2062A1.2)
 ENST00000619270 (CTD-2062A1.2-001) 139612002-139612363 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_000548_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024349-ENSMUSG00000091896 CGP 10090 18:35733678-35807172
GeneTranscriptPositionBiotype
ENSMUSG00000024349 (Tmem173)
transmembrane protein 173 		ENSMUST00000115728 (Tmem173-201) 35733678-35740554 protein_coding
ENSMUSG00000091842 (Gm16490)
predicted gene 16490 		ENSMUST00000165299 (Gm16490-001) 35770318-35770668 processed_pseudogene
ENSMUSG00000091896 (Ube2d2a)
ubiquitin-conjugating enzyme E2D 2A 		ENSMUST00000167406 (Ube2d2a-201) 35771602-35807163 protein_coding
ENSMUST00000170693 (Ube2d2a-202) 35771559-35807172 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000548_0001ENSG00000131508ENST00000253815ENST00000398733ENST00000398734ENST00000505007ENST00000505548ENST00000510470ENST00000511691ENST00000511725ENSG00000184584ENST00000330794ENST00000502362ENST00000502825ENST00000503287ENST00000503838ENST00000507297ENST00000509573ENST00000510817ENST00000511850ENST00000511886ENST00000512606ENST00000514119ENST00000514348ENST00000514542ENST00000515507ENSG00000249215ENST00000513338ENSG00000249689ENST00000515724ENSG00000275506ENST00000619270CIL_000548_0002ENSMUSG00000024349ENSMUST00000115728ENSMUSG00000091842ENSMUST00000165299ENSMUSG00000091896ENSMUST00000167406ENSMUST00000170693
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000548_0001ENSG00000131508ENST00000253815ENST00000398733ENST00000398734ENST00000505007ENST00000505548ENST00000511691ENST00000511725ENSG00000184584ENST00000330794ENST00000502825ENST00000503287ENST00000507297ENST00000509573ENST00000510817ENST00000511886ENST00000512606ENST00000514119ENST00000515507ENSG00000249215ENST00000513338ENSG00000249689ENST00000515724ENSG00000275506ENST00000619270CIL_000548_0002ENSMUSG00000024349ENSMUST00000115728ENSMUSG00000091842ENSMUST00000165299ENSMUSG00000091896ENSMUST00000167406ENSMUST00000170693
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131508 ENST00000253815 N/A N/A 10.255±0.00 20.384±0.00 9.036±0.00 16.009±0.00 14.326±5.27 13.000±0.00 18.132±6.02 17.357±2.19 26.437±4.03 42.326±37.93 29.111±0.08 N/A
ENST00000398733 18.497±0.00 23.804±0.00 1.254±0.00 15.449±10.90 9.305±8.44 4.891±0.41 6.627±5.76 8.683±6.41 4.852±2.05 13.385±0.00 9.010±7.88 13.043±9.90 12.588±4.74 22.729±5.75
ENST00000398734 17.986±0.00 26.010±0.00 N/A 22.140±0.00 16.452±0.00 9.221±0.00 4.104±2.81 16.429±0.00 4.347±0.00 7.282±4.69 9.736±0.00 10.701±9.18 16.246±8.84 42.067±2.90
ENST00000505007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A N/A
ENST00000505548 N/A N/A 1.241±0.00 N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A N/A N/A 17.551±0.00
ENST00000510470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511691 N/A N/A N/A N/A 3.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.387±0.00 32.986±0.00 68.258±0.00
ENSG00000184584 ENST00000330794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.343±0.00 N/A
ENST00000502362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502825 N/A N/A N/A N/A 2.339±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503287 N/A N/A N/A N/A N/A N/A N/A 0.645±0.00 N/A N/A N/A 8.044±6.76 18.444±0.00 3.580±0.00
ENST00000503838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507297 N/A 11.832±0.00 N/A 0.196±0.00 2.333±0.00 0.080±0.00 N/A N/A N/A N/A 0.171±0.00 2.586±0.00 N/A N/A
ENST00000509573 N/A N/A N/A N/A N/A N/A N/A N/A 1.241±0.00 58.025±0.00 N/A N/A N/A N/A
ENST00000510817 N/A N/A N/A N/A N/A 0.777±0.00 N/A N/A N/A 2.334±0.00 N/A N/A N/A N/A
ENST00000511850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511886 13.311±0.00 N/A N/A N/A N/A N/A 8.078±5.57 N/A N/A N/A N/A N/A N/A N/A
ENST00000512606 N/A N/A N/A N/A 1.732±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514119 N/A N/A N/A N/A N/A N/A 0.922±0.00 1.296±0.00 2.625±0.00 1.842±0.00 N/A N/A N/A N/A
ENST00000514348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515507 N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A 1.585±0.00 N/A N/A
ENSG00000249215 ENST00000513338 0.028±0.00 0.014±0.00 N/A 0.015±0.00 0.015±0.00 N/A 0.033±0.00 0.086±0.00 0.006±0.00 N/A 0.107±0.00 0.034±0.01 0.041±0.00 0.019±0.00
ENSG00000249689 ENST00000515724 N/A 0.025±0.00 N/A N/A 0.095±0.00 N/A N/A 0.588±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000275506 ENST00000619270 0.070±0.00 0.289±0.00 0.812±0.00 0.181±0.00 0.283±0.00 N/A 0.032±0.00 0.105±0.00 0.121±0.00 N/A N/A 0.092±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024349 ENSMUST00000115728 11.656±2.92 3.425±0.59 5.359±1.19 0.621±0.20 23.253±5.20 7.645±1.34 3.029±0.81 3.083±0.23 2.015±0.96 9.349±0.56 1.131±0.74 9.624±3.46 1.559±0.96 0.314±0.14
ENSMUSG00000091842 ENSMUST00000165299 N/A N/A N/A 0.071±0.03 N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A 0.028±0.00 0.199±0.00
ENSMUSG00000091896 ENSMUST00000167406 N/A N/A N/A N/A N/A N/A N/A N/A 2.303±0.43 N/A N/A N/A N/A 1.709±0.00
ENSMUST00000170693 10.067±1.68 17.344±8.74 15.692±5.42 21.455±6.16 10.221±3.19 9.750±2.58 9.278±0.41 9.243±1.81 9.373±5.32 12.672±2.22 16.202±1.85 13.352±10.92 31.667±11.14 19.641±1.79

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