C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077935-ENSG00000128408 CGP 9606 22:45344063-45432496
GeneTranscriptPositionBiotype
ENSG00000077935 (SMC1B)
structural maintenance of chromosomes 1B 		ENST00000357450 (SMC1B-003) 45344063-45413567 protein_coding
ENST00000404354 (SMC1B-002) 45344458-45413619 protein_coding
ENSG00000128408 (RIBC2)
RIB43A domain with coiled-coils 2 		ENST00000466226 (RIBC2-003) 45418007-45431016 processed_transcript
ENST00000614167 (RIBC2-001) 45413691-45432496 protein_coding
ENST00000621287 (RIBC2-002) 45414323-45422506 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_00054C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022432-ENSMUSG00000022431 CGP 10090 15:85064691-85144569
GeneTranscriptPositionBiotype
ENSMUSG00000022431 (Ribc2)
RIB43A domain with coiled-coils 2 		ENSMUST00000023067 (Ribc2-201) 85132099-85144569 protein_coding
ENSMUSG00000022432 (Smc1b)
structural maintenance of chromosomes 1B 		ENSMUST00000023068 (Smc1b-201) 85064691-85131957 protein_coding
ENSMUSG00000078289 (Gm10923)
predicted gene 10923 		ENSMUST00000105085 (Gm10923-001) 85116870-85117287 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054C_0001ENSG00000077935ENST00000357450ENST00000404354ENSG00000128408ENST00000466226ENST00000614167ENST00000621287CIL_00054C_0002ENSMUSG00000022431ENSMUST00000023067ENSMUSG00000022432ENSMUST00000023068ENSMUSG00000078289ENSMUST00000105085
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054C_0001ENSG00000077935ENST00000357450ENST00000404354ENSG00000128408ENST00000466226ENST00000614167ENST00000621287CIL_00054C_0002ENSMUSG00000022431ENSMUST00000023067ENSMUSG00000022432ENSMUST00000023068ENSMUSG00000078289ENSMUST00000105085
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077935 ENST00000357450 N/A 0.031±0.00 N/A N/A 0.062±0.00 0.014±0.00 N/A N/A N/A 0.004±0.00 N/A 0.023±0.01 0.058±0.00 16.142±3.95
ENST00000404354 N/A N/A N/A 0.028±0.00 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A 0.148±0.00 13.147±11.03
ENSG00000128408 ENST00000466226 N/A N/A N/A 0.117±0.00 N/A 0.137±0.00 N/A N/A N/A 0.232±0.17 N/A 0.518±0.20 N/A 12.058±0.00
ENST00000614167 N/A N/A N/A 0.155±0.00 0.139±0.06 0.175±0.00 N/A 0.115±0.00 N/A 0.398±0.00 N/A 1.768±1.02 0.217±0.01 21.991±4.93
ENST00000621287 0.044±0.00 N/A 0.071±0.00 0.133±0.02 0.293±0.00 0.278±0.00 N/A 0.478±0.00 N/A 0.294±0.00 N/A N/A 0.360±0.10 4.024±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022431 ENSMUST00000023067 0.021±0.00 N/A 0.395±0.00 0.155±0.07 0.051±0.01 0.043±0.00 0.057±0.02 0.078±0.04 0.010±0.01 0.282±0.03 N/A 0.412±0.22 0.058±0.04 25.760±17.45
ENSMUSG00000022432 ENSMUST00000023068 N/A 0.113±0.03 N/A 0.018±0.01 0.016±0.00 N/A 0.014±0.01 0.014±0.00 0.021±0.01 0.055±0.00 0.008±0.00 0.159±0.06 0.097±0.07 49.345±65.08
ENSMUSG00000078289 ENSMUST00000105085 0.138±0.00 N/A 0.148±0.02 0.191±0.10 N/A N/A 0.120±0.00 0.148±0.00 0.041±0.01 N/A 0.135±0.00 0.284±0.17 0.155±0.18 1.206±0.62

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