C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100373-ENSG00000100376 CGP 9606 22:45284982-45341955
GeneTranscriptPositionBiotype
ENSG00000100373 (UPK3A)
uroplakin 3A 		ENST00000216211 (UPK3A-001) 45284982-45295874 protein_coding
ENST00000396082 (UPK3A-002) 45284991-45295822 protein_coding
ENSG00000100376 (FAM118A)
family with sequence similarity 118, member A 		ENST00000216214 (FAM118A-001) 45308982-45341955 protein_coding
ENST00000405673 (FAM118A-003) 45310124-45329412 protein_coding
ENST00000424557 (FAM118A-008) 45318791-45322383 protein_coding
ENST00000427777 (FAM118A-006) 45318420-45327960 protein_coding
ENST00000441876 (FAM118A-002) 45309847-45340761 protein_coding
ENST00000452238 (FAM118A-007) 45318480-45322426 protein_coding
ENST00000459849 (FAM118A-010) 45329635-45332691 processed_transcript
ENST00000462361 (FAM118A-013) 45335216-45340846 retained_intron
ENST00000476478 (FAM118A-009) 45329148-45330719 processed_transcript
ENST00000476754 (FAM118A-011) 45329644-45332655 processed_transcript
ENST00000477714 (FAM118A-005) 45310137-45328241 retained_intron
ENST00000479180 (FAM118A-014) 45336395-45340882 processed_transcript
ENST00000481447 (FAM118A-015) 45309041-45310100 processed_transcript
ENST00000483102 (FAM118A-016) 45335025-45340761 processed_transcript
ENST00000487732 (FAM118A-012) 45330457-45336410 retained_intron
ENST00000491671 (FAM118A-004) 45308968-45310173 processed_transcript
CIL_00054I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022435-ENSMUSG00000022434 CGP 10090 15:85017141-85062828
GeneTranscriptPositionBiotype
ENSMUSG00000022434 (Fam118a)
family with sequence similarity 118, member A 		ENSMUST00000023069 (Fam118a-201) 85037062-85062828 protein_coding
ENSMUSG00000022435 (Upk3a)
uroplakin 3A 		ENSMUST00000023070 (Upk3a-201) 85017141-85022560 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054I_0001ENSG00000100373ENST00000216211ENST00000396082ENSG00000100376ENST00000216214ENST00000405673ENST00000424557ENST00000427777ENST00000441876ENST00000452238ENST00000459849ENST00000462361ENST00000476478ENST00000476754ENST00000477714ENST00000479180ENST00000481447ENST00000483102ENST00000487732ENST00000491671CIL_00054I_0002ENSMUSG00000022434ENSMUST00000023069ENSMUSG00000022435ENSMUST00000023070
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054I_0001ENSG00000100373ENST00000216211ENST00000396082ENSG00000100376ENST00000216214ENST00000405673ENST00000441876ENST00000479180ENST00000483102ENST00000487732CIL_00054I_0002ENSMUSG00000022434ENSMUST00000023069ENSMUSG00000022435ENSMUST00000023070
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100373 ENST00000216211 N/A 0.167±0.00 N/A 0.116±0.00 0.056±0.00 N/A 0.022±0.00 0.053±0.00 1.975±0.00 N/A 0.424±0.00 0.120±0.05 0.137±0.00 0.047±0.00
ENST00000396082 N/A N/A N/A N/A 0.097±0.00 N/A N/A 0.189±0.00 N/A 0.130±0.00 0.468±0.32 0.264±0.26 0.082±0.00 0.039±0.00
ENSG00000100376 ENST00000216214 N/A N/A N/A 0.347±0.00 N/A 0.527±0.00 N/A N/A N/A N/A N/A 3.810±2.65 N/A N/A
ENST00000405673 N/A N/A N/A 0.811±0.00 N/A N/A 0.618±0.00 N/A 0.784±0.00 N/A N/A N/A N/A N/A
ENST00000424557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441876 1.950±0.00 N/A 0.340±0.00 0.832±0.00 2.989±0.00 1.100±0.00 1.204±0.00 N/A N/A 2.431±0.00 3.025±0.00 5.615±2.15 2.872±1.00 13.676±4.59
ENST00000452238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479180 N/A N/A 0.810±0.00 3.096±0.00 8.069±0.00 N/A 1.250±0.00 N/A N/A N/A 7.699±0.00 N/A N/A N/A
ENST00000481447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.397±0.00 4.214±0.00 18.286±0.00
ENST00000487732 N/A N/A N/A 3.546±0.00 N/A 5.110±0.00 0.843±0.00 N/A 2.777±0.00 3.019±0.00 N/A N/A N/A N/A
ENST00000491671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022434 ENSMUST00000023069 3.926±1.65 1.931±1.12 16.315±0.57 4.470±0.45 3.615±1.30 2.503±0.95 1.370±0.23 1.991±0.25 1.421±0.72 2.962±0.97 0.966±0.34 4.775±2.38 3.904±1.53 9.436±3.83
ENSMUSG00000022435 ENSMUST00000023070 1.718±1.65 N/A 529.601±226.41 0.138±0.03 6.170±3.47 0.069±0.05 0.140±0.07 8.171±1.31 0.017±0.01 1.065±0.27 N/A 0.374±0.25 0.604±0.27 0.474±0.06

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