C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198482-ENSG00000167562 CGP 9606 19:52527652-52587174
GeneTranscriptPositionBiotype
ENSG00000167562 (ZNF701)
zinc finger protein 701 		ENST00000301093 (ZNF701-002) 52570301-52584436 protein_coding
ENST00000391785 (ZNF701-001) 52570275-52584566 protein_coding
ENST00000478039 (ZNF701-005) 52555822-52574130 processed_transcript
ENST00000540331 (ZNF701-201) 52570664-52587174 protein_coding
ENST00000593941 (ZNF701-003) 52570664-52582499 protein_coding
ENST00000596514 (ZNF701-004) 52570273-52582276 protein_coding
ENSG00000198482 (ZNF808)
zinc finger protein 808 		ENST00000359798 (ZNF808-001) 52527653-52556336 protein_coding
ENST00000461321 (ZNF808-006) 52535985-52553436 protein_coding
ENST00000461779 (ZNF808-005) 52527709-52553166 protein_coding
ENST00000465448 (ZNF808-004) 52527663-52553456 protein_coding
ENST00000486474 (ZNF808-007) 52527668-52553431 protein_coding
ENST00000487863 (ZNF808-002) 52527652-52564464 nonsense_mediated_decay
ENST00000611267 (ZNF808-201) 52555457-52556760 protein_coding

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CIL_00055X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213799-ENSG00000196417 CGP 9606 19:53333749-53430413
GeneTranscriptPositionBiotype
ENSG00000196417 (ZNF765)
zinc finger protein 765 		ENST00000396408 (ZNF765-001) 53395150-53412007 protein_coding
ENST00000504146 (ZNF765-006) 53389793-53423097 processed_transcript
ENST00000504235 (ZNF765-004) 53395144-53427321 nonsense_mediated_decay
ENST00000505866 (ZNF765-002) 53395161-53408098 protein_coding
ENST00000507045 (ZNF765-005) 53395155-53425568 nonsense_mediated_decay
ENST00000594030 (ZNF765-009) 53395173-53430413 protein_coding
ENST00000594627 (ZNF765-008) 53423320-53426888 processed_transcript
ENST00000596086 (ZNF765-007) 53423375-53427155 processed_transcript
ENSG00000203326 (ZNF525)
zinc finger protein 525 		ENST00000467003 (ZNF525-001) 53365707-53386593 protein_coding
ENST00000474037 (ZNF525-002) 53365693-53384335 protein_coding
ENST00000475179 (ZNF525-003) 53365713-53386581 protein_coding
ENST00000491101 (ZNF525-005) 53365704-53376442 protein_coding
ENST00000497729 (ZNF525-004) 53365693-53376157 retained_intron
ENST00000593918 (ZNF525-008) 53365729-53392217 protein_coding
ENST00000600148 (ZNF525-006) 53379381-53381049 processed_transcript
ENST00000601790 (ZNF525-007) 53383923-53385231 processed_transcript
ENST00000624073 (ZNF525-201) 53330675-53386388 protein_coding
ENSG00000213799 (ZNF845)
zinc finger protein 845 		ENST00000458035 (ZNF845-201) 53333749-53354869 protein_coding
ENST00000595091 (ZNF845-001) 53333749-53354546 protein_coding
ENST00000601857 (ZNF845-004) 53333749-53351084 protein_coding
ENSG00000239912 (RPL39P36)
ribosomal protein L39 pseudogene 36 		ENST00000490784 (RPL39P36-001) 53413190-53413345 processed_pseudogene

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CIL_00055X_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023892-ENSMUSG00000057409 CGP 10090 17:21450352-21509764
GeneTranscriptPositionBiotype
ENSMUSG00000023892 (Zfp51)
zinc finger protein 51 		ENSMUST00000039577 (Zfp51-201) 21450352-21465591 protein_coding
ENSMUSG00000057409 (Zfp53)
zinc finger protein 53 		ENSMUST00000076664 (Zfp53-201) 21491256-21509764 protein_coding
ENSMUSG00000097759 (Gm26753)
predicted gene, 26753 		ENSMUST00000181938 (Gm26753-201) 21485177-21488875 lincRNA

Mus musculus Ensembl (GRCm38)

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CIL_00055X_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078502-ENSMUSG00000058186 CGP 10090 4:145585166-145704441
GeneTranscriptPositionBiotype
ENSMUSG00000058186 (Gm13242)
predicted gene 13242 		ENSMUST00000105738 (Gm13242-001) 145670685-145704441 protein_coding
ENSMUST00000180014 (Gm13242-201) 145696161-145702640 protein_coding
ENSMUSG00000078502 (Gm13212)
predicted gene 13212 		ENSMUST00000097794 (Gm13212-201) 145617146-145623215 protein_coding
ENSMUST00000105739 (Gm13212-001) 145585166-145625345 protein_coding
ENSMUST00000119718 (Gm13212-002) 145585203-145625341 protein_coding
ENSMUSG00000081885 (Gm13231)
predicted gene 13231 		ENSMUST00000119218 (Gm13231-001) 145641357-145644399 processed_pseudogene
ENSMUSG00000082615 (Gm13239)
predicted gene 13239 		ENSMUST00000119920 (Gm13239-001) 145689842-145690478 processed_pseudogene
ENSMUSG00000083562 (Gm13234)
predicted gene 13234 		ENSMUST00000120010 (Gm13234-001) 145632504-145633250 processed_pseudogene
ENSMUSG00000097661 (Gm26763)
predicted gene, 26763 		ENSMUST00000180968 (Gm26763-201) 145601963-145711968 lincRNA

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055X_0001ENSG00000167562ENST00000301093ENST00000391785ENST00000478039ENST00000540331ENST00000593941ENST00000596514ENSG00000198482ENST00000359798ENST00000461321ENST00000461779ENST00000465448ENST00000486474ENST00000487863ENST00000611267CIL_00055X_0002ENSG00000196417ENST00000396408ENST00000504146ENST00000504235ENST00000505866ENST00000507045ENST00000594030ENST00000594627ENST00000596086ENSG00000203326ENST00000467003ENST00000474037ENST00000475179ENST00000491101ENST00000497729ENST00000593918ENST00000600148ENST00000601790ENST00000624073ENSG00000213799ENST00000458035ENST00000595091ENST00000601857ENSG00000239912ENST00000490784CIL_00055X_0003ENSMUSG00000023892ENSMUST00000039577ENSMUSG00000057409ENSMUST00000076664ENSMUSG00000097759ENSMUST00000181938CIL_00055X_0004ENSMUSG00000058186ENSMUST00000105738ENSMUST00000180014ENSMUSG00000078502ENSMUST00000097794ENSMUST00000105739ENSMUST00000119718ENSMUSG00000081885ENSMUST00000119218ENSMUSG00000082615ENSMUST00000119920ENSMUSG00000083562ENSMUST00000120010ENSMUSG00000097661ENSMUST00000180968
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055X_0001ENSG00000167562ENST00000301093ENST00000391785ENST00000540331ENSG00000198482ENST00000359798ENST00000487863ENST00000611267CIL_00055X_0002ENSG00000196417ENST00000396408ENST00000504235ENST00000507045ENST00000594030ENSG00000203326ENST00000467003ENST00000474037ENST00000475179ENST00000593918ENST00000624073ENSG00000213799ENST00000458035ENST00000595091ENST00000601857ENSG00000239912ENST00000490784CIL_00055X_0003ENSMUSG00000023892ENSMUST00000039577ENSMUSG00000057409ENSMUST00000076664ENSMUSG00000097759ENSMUST00000181938CIL_00055X_0004ENSMUSG00000058186ENSMUST00000105738ENSMUST00000180014ENSMUSG00000078502ENSMUST00000097794ENSMUST00000105739ENSMUST00000119718ENSMUSG00000081885ENSMUST00000119218ENSMUSG00000082615ENSMUST00000119920ENSMUSG00000083562ENSMUST00000120010ENSMUSG00000097661ENSMUST00000180968
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167562 ENST00000301093 N/A N/A 1.260±0.00 N/A N/A N/A 0.840±0.00 N/A 0.131±0.00 N/A 0.302±0.00 N/A 0.326±0.00 N/A
ENST00000391785 0.679±0.00 1.048±0.00 N/A 0.495±0.11 1.789±1.08 1.384±0.36 N/A N/A 1.485±0.00 2.643±0.00 N/A 0.958±0.07 0.510±0.06 N/A
ENST00000478039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540331 0.403±0.00 0.528±0.00 N/A 0.267±0.00 0.667±0.33 0.327±0.00 N/A 1.025±0.00 N/A 0.413±0.00 N/A 0.424±0.05 1.090±0.00 0.512±0.00
ENST00000593941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198482 ENST00000359798 N/A N/A 1.339±0.00 0.481±0.00 2.443±0.00 2.276±0.00 1.216±0.00 N/A N/A 3.716±0.00 1.495±0.00 N/A N/A N/A
ENST00000461321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487863 N/A N/A N/A 0.484±0.00 1.060±0.00 1.291±0.17 0.952±0.24 2.341±0.00 0.199±0.00 1.145±0.00 0.534±0.06 0.774±0.34 0.428±0.00 0.950±0.00
ENST00000611267 N/A 1.852±0.00 N/A N/A 1.636±0.00 N/A 1.849±0.00 N/A 0.384±0.00 N/A 0.675±0.00 N/A 0.895±0.00 2.690±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196417 ENST00000396408 0.678±0.00 1.282±0.00 0.256±0.00 0.438±0.00 1.335±0.46 0.471±0.19 0.485±0.00 1.032±0.51 N/A 0.301±0.06 N/A 0.858±0.43 0.635±0.08 0.646±0.00
ENST00000504146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504235 N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A 0.519±0.13 N/A
ENST00000505866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507045 N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A N/A N/A N/A
ENST00000594030 0.167±0.00 0.805±0.00 0.051±0.00 N/A 0.326±0.00 0.154±0.01 0.087±0.07 0.175±0.00 0.116±0.00 0.141±0.00 0.045±0.01 0.455±0.10 0.158±0.00 0.561±0.16
ENST00000594627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000203326 ENST00000467003 0.207±0.00 0.411±0.00 N/A 0.140±0.00 0.270±0.00 0.399±0.00 0.096±0.05 0.934±0.00 0.093±0.00 0.319±0.00 N/A 0.406±0.15 0.212±0.15 0.705±0.00
ENST00000474037 N/A N/A 0.609±0.00 0.431±0.00 N/A 0.411±0.00 0.225±0.15 0.277±0.00 1.882±0.00 1.832±0.00 0.016±0.00 0.312±0.00 0.074±0.00 0.289±0.00
ENST00000475179 N/A 1.507±0.00 0.253±0.00 0.173±0.00 0.471±0.00 0.749±0.00 0.185±0.00 0.932±0.00 0.176±0.00 0.459±0.00 N/A 1.079±0.33 0.910±0.59 1.435±0.30
ENST00000491101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593918 N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A 0.568±0.00 N/A
ENST00000600148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624073 33.300±0.00 38.199±0.00 N/A 8.396±0.00 17.115±0.00 42.993±0.00 9.252±0.00 N/A 13.700±0.00 32.108±0.00 18.716±0.00 N/A N/A 20.244±0.00
ENSG00000213799 ENST00000458035 0.104±0.00 1.112±0.00 N/A 0.154±0.00 1.009±0.57 0.501±0.00 0.252±0.17 0.543±0.00 0.154±0.00 0.241±0.00 0.169±0.00 0.319±0.13 0.328±0.13 0.735±0.31
ENST00000595091 0.815±0.00 0.726±0.00 0.629±0.00 0.578±0.25 0.607±0.00 0.638±0.19 0.350±0.23 0.630±0.06 0.693±0.44 1.067±0.68 0.068±0.00 0.587±0.24 0.143±0.06 0.267±0.00
ENST00000601857 N/A N/A N/A N/A 1.928±0.00 2.758±0.00 0.671±0.00 N/A N/A N/A 0.720±0.00 N/A N/A N/A
ENSG00000239912 ENST00000490784 N/A 0.645±0.00 3.302±0.00 0.216±0.00 0.412±0.00 0.295±0.00 N/A 0.529±0.00 N/A 0.471±0.00 N/A 11.031±10.33 N/A 0.585±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023892 ENSMUST00000039577 1.005±0.26 0.253±0.13 4.643±1.30 3.417±2.50 0.709±0.20 0.787±0.17 0.847±0.37 0.567±0.12 1.665±1.47 1.159±0.15 2.508±0.22 1.451±1.24 2.287±1.01 1.744±0.42
ENSMUSG00000057409 ENSMUST00000076664 0.577±0.00 0.211±0.03 5.463±1.45 1.658±0.03 1.248±0.27 0.437±0.28 0.373±0.03 0.551±0.00 1.537±1.08 1.049±0.12 0.284±0.13 2.932±1.52 1.331±0.52 0.283±0.09
ENSMUSG00000097759 ENSMUST00000181938 0.047±0.03 0.103±0.05 0.015±0.01 0.013±0.01 0.099±0.02 0.075±0.02 0.013±0.00 0.043±0.02 0.049±0.06 0.058±0.03 0.011±0.00 0.133±0.09 0.028±0.01 0.015±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058186 ENSMUST00000105738 N/A 0.095±0.00 0.003±0.00 0.008±0.01 N/A N/A N/A 0.028±0.00 0.024±0.01 N/A 0.014±0.00 0.040±0.02 0.016±0.01 0.120±0.06
ENSMUST00000180014 0.021±0.00 N/A 0.007±0.00 0.018±0.01 0.091±0.04 N/A N/A 0.027±0.00 0.115±0.09 N/A 0.022±0.02 0.044±0.03 0.018±0.00 0.593±0.31
ENSMUSG00000078502 ENSMUST00000097794 0.102±0.00 N/A N/A N/A N/A N/A 0.052±0.02 N/A 0.123±0.00 0.137±0.06 N/A 0.380±0.15 0.337±0.26 N/A
ENSMUST00000105739 0.143±0.08 N/A 0.229±0.03 0.077±0.03 0.181±0.02 N/A 0.119±0.11 0.079±0.00 0.266±0.12 0.115±0.09 0.054±0.02 0.411±0.09 0.351±0.03 0.068±0.02
ENSMUST00000119718 0.206±0.16 0.161±0.01 0.130±0.00 0.012±0.00 0.424±0.09 0.141±0.06 0.132±0.04 0.092±0.07 0.145±0.08 0.037±0.02 0.010±0.00 0.761±0.45 0.417±0.39 0.151±0.10
ENSMUSG00000081885 ENSMUST00000119218 N/A N/A 0.007±0.00 0.018±0.00 0.130±0.00 0.070±0.00 N/A N/A 0.012±0.02 N/A N/A 0.017±0.00 0.083±0.07 0.145±0.13
ENSMUSG00000082615 ENSMUST00000119920 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A 0.230±0.20
ENSMUSG00000083562 ENSMUST00000120010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 0.123±0.11 0.242±0.00
ENSMUSG00000097661 ENSMUST00000180968 0.179±0.14 N/A 0.007±0.00 0.029±0.01 0.360±0.22 N/A 0.071±0.00 0.055±0.00 0.033±0.02 0.148±0.00 N/A 0.242±0.32 0.082±0.06 8.505±4.56

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