C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000565_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026499-ENSDARG00000076473 CGP 7955 10:33637880-33806638
GeneTranscriptPositionBiotype
ENSDARG00000026499 (ppm1e)
protein phosphatase 1E (PP2C domain containing) 		ENSDART00000063551 (ppm1e-001) 33637880-33743623 protein_coding
ENSDARG00000076473 (trim37)
tripartite motif containing 37 		ENSDART00000110986 (trim37-201) 33765976-33804901 protein_coding
ENSDART00000134255 (trim37-001) 33764411-33806638 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000565_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175175-ENSG00000108395 CGP 9606 17:58755869-59106921
GeneTranscriptPositionBiotype
ENSG00000108395 (TRIM37)
tripartite motif containing 37 		ENST00000262294 (TRIM37-002) 58998202-59106721 protein_coding
ENST00000393065 (TRIM37-003) 58998987-59106826 protein_coding
ENST00000393066 (TRIM37-001) 58982651-59106921 protein_coding
ENST00000577554 (TRIM37-004) 58998200-59106740 nonsense_mediated_decay
ENST00000580122 (TRIM37-010) 59079798-59106459 nonsense_mediated_decay
ENST00000580620 (TRIM37-006) 59087979-59106664 retained_intron
ENST00000580973 (TRIM37-007) 59075684-59106715 nonsense_mediated_decay
ENST00000581468 (TRIM37-008) 59061089-59081162 protein_coding
ENST00000582852 (TRIM37-009) 59064152-59079807 retained_intron
ENST00000583387 (TRIM37-005) 59087980-59106711 retained_intron
ENST00000583945 (TRIM37-011) 58982651-59012407 protein_coding
ENST00000584889 (TRIM37-013) 59088226-59106468 protein_coding
ENST00000585287 (TRIM37-012) 58982638-59015617 protein_coding
ENSG00000175175 (PPM1E)
protein phosphatase, Mg2+/Mn2+ dependent, 1E 		ENST00000308249 (PPM1E-001) 58755869-58985176 protein_coding
ENSG00000216168 (AC100832.1)
 ENST00000401349 (AC100832.1-201) 58988868-58988954 miRNA
ENSG00000224738 (AC099850.1)
 ENST00000451775 (AC099850.1-001) 59106598-59118267 antisense
ENSG00000241462 (RP11-579O24.1)
 ENST00000471945 (RP11-579O24.1-001) 58897776-58899692 processed_pseudogene
ENSG00000263558 (RN7SL716P)
RNA, 7SL, cytoplasmic 716, pseudogene 		ENST00000580539 (RN7SL716P-201) 59059226-59059493 misc_RNA
ENSG00000263938 (RP11-579O24.3)
 ENST00000582080 (RP11-579O24.3-001) 58965952-58966727 sense_intronic
ENSG00000275680 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000613789 (Metazoa_SRP.1-331) 58951185-58951513 misc_RNA
ENSG00000276601 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616695 (Metazoa_SRP.1-380) 58785323-58785608 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000565_0001ENSDARG00000026499ENSDART00000063551ENSDARG00000076473ENSDART00000110986ENSDART00000134255CIL_000565_0002ENSG00000108395ENST00000262294ENST00000393065ENST00000393066ENST00000577554ENST00000580122ENST00000580620ENST00000580973ENST00000581468ENST00000582852ENST00000583387ENST00000583945ENST00000584889ENST00000585287ENSG00000175175ENST00000308249ENSG00000216168ENST00000401349ENSG00000224738ENST00000451775ENSG00000241462ENST00000471945ENSG00000263558ENST00000580539ENSG00000263938ENST00000582080ENSG00000275680ENST00000613789ENSG00000276601ENST00000616695
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000565_0001ENSDARG00000026499ENSDART00000063551ENSDARG00000076473ENSDART00000110986ENSDART00000134255CIL_000565_0002ENSG00000108395ENST00000262294ENST00000393065ENST00000393066ENST00000577554ENSG00000175175ENST00000308249ENSG00000216168ENST00000401349ENSG00000224738ENST00000451775ENSG00000241462ENST00000471945ENSG00000263558ENST00000580539ENSG00000263938ENST00000582080ENSG00000275680ENST00000613789ENSG00000276601ENST00000616695
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026499 ENSDART00000063551 N/A N/A N/A N/A N/A N/A 1.906±0.00 0.029±0.00 0.119±0.00 N/A 1.300±0.00 N/A N/A N/A
ENSDARG00000076473 ENSDART00000110986 N/A N/A N/A 6.246±0.00 N/A N/A N/A N/A 0.030±0.00 N/A 0.269±0.00 N/A N/A N/A
ENSDART00000134255 N/A N/A N/A 5.775±4.84 N/A N/A 1.620±0.32 4.080±1.51 0.091±0.00 N/A 0.430±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108395 ENST00000262294 2.066±0.00 3.498±0.00 N/A 27.331±4.79 3.647±0.00 3.403±1.04 2.908±1.67 3.330±0.85 1.672±0.00 2.479±0.00 2.020±1.03 5.523±1.08 4.403±2.57 32.572±13.05
ENST00000393065 1.069±0.00 N/A 0.782±0.00 N/A 1.900±0.00 N/A 0.898±0.00 N/A 2.985±0.00 1.532±0.00 0.292±0.00 3.410±0.00 N/A N/A
ENST00000393066 N/A N/A 1.477±0.00 N/A N/A N/A N/A N/A 1.131±0.00 1.316±0.00 N/A N/A N/A 21.781±0.00
ENST00000577554 0.611±0.00 0.792±0.00 N/A N/A N/A N/A N/A N/A 0.553±0.00 1.312±0.00 N/A 0.954±0.00 N/A N/A
ENST00000580122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175175 ENST00000308249 N/A N/A N/A 5.983±1.39 N/A N/A N/A 1.010±0.00 0.296±0.00 0.223±0.00 N/A 1.003±0.46 N/A 7.732±3.75
ENSG00000216168 ENST00000401349 N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224738 ENST00000451775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.080±2.09 N/A N/A N/A
ENSG00000241462 ENST00000471945 N/A N/A N/A 0.191±0.00 N/A N/A 0.036±0.00 N/A N/A 0.035±0.00 N/A 0.265±0.00 N/A 0.769±0.53
ENSG00000263558 ENST00000580539 0.400±0.00 0.465±0.00 N/A N/A 0.058±0.00 N/A 0.056±0.00 N/A N/A N/A N/A 0.473±0.00 0.122±0.00 0.463±0.36
ENSG00000263938 ENST00000582080 0.050±0.00 0.035±0.00 N/A 0.216±0.11 0.032±0.00 N/A 0.011±0.00 N/A 0.040±0.00 N/A N/A 0.154±0.13 0.057±0.00 0.144±0.05
ENSG00000275680 ENST00000613789 0.047±0.00 N/A N/A 0.160±0.00 N/A N/A 0.046±0.00 N/A N/A 0.232±0.00 0.044±0.00 N/A N/A N/A
ENSG00000276601 ENST00000616695 N/A 0.252±0.00 N/A 0.133±0.00 N/A 0.038±0.00 0.046±0.00 0.042±0.00 N/A N/A N/A N/A N/A 0.116±0.00

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