C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00056C_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000069085-ENSDARG00000053884 | CGP | 7955 | 10:28659154-28799521  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000053884  (med13a)mediator complex subunit 13a |
ENSDART00000088852 (med13a-201)
|
28711824-28798981 | protein_coding | |
|
ENSDART00000134491 (med13a-001)
|
28711823-28799521 | protein_coding | ||
| CIL_00056C_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000108506-ENSG00000108510 | CGP | 9606 | 17:61865367-62065282 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000108506 (INTS2) integrator complex subunit 2 |
ENST00000251334 (INTS2-002)
|
61867249-61927991 | protein_coding | |
|
ENST00000444766 (INTS2-001)
|
61865370-61928016 | protein_coding | ||
|
ENST00000578805 (INTS2-004)
|
61891577-61894186 | retained_intron | ||
|
ENST00000583076 (INTS2-003)
|
61926408-61927426 | protein_coding | ||
|
ENST00000583822 (INTS2-006)
|
61872023-61885005 | retained_intron | ||
|
ENST00000584967 (INTS2-005)
|
61877981-61885290 | retained_intron | ||
|
ENST00000617492 (INTS2-201)
|
61865367-61927105 | protein_coding | ||
|
ENSG00000108510 (MED13) mediator complex subunit 13 |
ENST00000397786 (MED13-001)
|
61942605-62065282 | protein_coding | |
|
ENST00000578132 (MED13-005)
|
62029298-62033825 | retained_intron | ||
|
ENST00000580896 (MED13-004)
|
62031513-62032473 | processed_transcript | ||
|
ENST00000581994 (MED13-002)
|
62029277-62031489 | retained_intron | ||
|
ENST00000582786 (MED13-006)
|
61955311-61955763 | retained_intron | ||
|
ENST00000583958 (MED13-003)
|
62010427-62030000 | protein_coding | ||
|
ENSG00000200842 (Y_RNA) Y RNA |
ENST00000363972 (Y_RNA.1-392)
|
62036833-62036945 | misc_RNA | |
|
ENSG00000202361 (Y_RNA) Y RNA |
ENST00000365491 (Y_RNA.1-560)
|
61874084-61874182 | misc_RNA | |
|
ENSG00000221302 (AC018628.1) |
ENST00000408375 (AC018628.1-201)
|
62015857-62015937 | miRNA | |
|
ENSG00000242398 (RN7SL800P) RNA, 7SL, cytoplasmic 800, pseudogene |
ENST00000484823 (RN7SL800P-201)
|
62005737-62006016 | misc_RNA | |
|
ENSG00000279133 (RP11-342K2.1) |
ENST00000624147 (RP11-342K2.1-001)
|
62003700-62007518 | TEC | |
| CIL_00056C_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000018068-ENSMUSG00000034297 | CGP | 10090 | 11:86210681-86357602 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000018068 (Ints2) integrator complex subunit 2 |
ENSMUST00000018212 (Ints2-001)
|
86210681-86257550 | protein_coding | |
|
ENSMUST00000108039 (Ints2-002)
|
86212088-86256546 | protein_coding | ||
|
ENSMUST00000127745 (Ints2-009)
|
86235612-86238883 | retained_intron | ||
|
ENSMUST00000130614 (Ints2-004)
|
86256353-86257340 | retained_intron | ||
|
ENSMUST00000132024 (Ints2-005)
|
86255360-86257554 | protein_coding | ||
|
ENSMUST00000134828 (Ints2-011)
|
86217809-86229233 | nonsense_mediated_decay | ||
|
ENSMUST00000134883 (Ints2-008)
|
86234672-86257541 | retained_intron | ||
|
ENSMUST00000136469 (Ints2-003)
|
86256026-86257518 | protein_coding | ||
|
ENSMUST00000139285 (Ints2-007)
|
86251051-86257575 | protein_coding | ||
|
ENSMUST00000141756 (Ints2-006)
|
86256443-86257565 | processed_transcript | ||
|
ENSMUST00000146421 (Ints2-010)
|
86224943-86232176 | retained_intron | ||
|
ENSMUSG00000034297 (Med13) mediator complex subunit 13 |
ENSMUST00000043624 (Med13-001)
|
86267033-86357602 | protein_coding | |
|
ENSMUST00000136622 (Med13-002)
|
86272547-86278600 | processed_transcript | ||
|
ENSMUST00000140514 (Med13-003)
|
86275374-86278992 | retained_intron | ||
|
ENSMUST00000144983 (Med13-004)
|
86331006-86332183 | retained_intron | ||
|
ENSMUSG00000085208 (Brip1os) BRCA1 interacting protein C-terminal helicase 1, opposite strand |
ENSMUST00000128960 (Brip1os-001)
|
86201370-86211192 | antisense | |
|
ENSMUST00000143819 (Brip1os-002)
|
86201383-86304443 | antisense | ||
|
ENSMUSG00000088230 (Gm25427) predicted gene, 25427 |
ENSMUST00000157605 (Gm25427-201)
|
86333206-86333308 | misc_RNA | |
Expression Patterns
|
