C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149646-ENSG00000088367 CGP 9606 20:35954564-36232799
GeneTranscriptPositionBiotype
ENSG00000088367 (EPB41L1)
erythrocyte membrane protein band 4.1-like 1 		ENST00000202028 (EPB41L1-013) 36091504-36230341 protein_coding
ENST00000338074 (EPB41L1-008) 36154750-36232799 protein_coding
ENST00000373941 (EPB41L1-011) 36173769-36229340 protein_coding
ENST00000373945 (EPB41L1-005) 36154742-36185335 protein_coding
ENST00000373946 (EPB41L1-201) 36092710-36232799 protein_coding
ENST00000373950 (EPB41L1-010) 36092710-36230327 protein_coding
ENST00000406771 (EPB41L1-015) 36092680-36182285 protein_coding
ENST00000427533 (EPB41L1-003) 36121722-36173954 protein_coding
ENST00000430276 (EPB41L1-001) 36092698-36188430 protein_coding
ENST00000432589 (EPB41L1-014) 36091842-36175671 protein_coding
ENST00000432603 (EPB41L1-012) 36214373-36229845 protein_coding
ENST00000441639 (EPB41L1-202) 36092710-36232799 protein_coding
ENST00000447825 (EPB41L1-002) 36092837-36175715 protein_coding
ENST00000451082 (EPB41L1-006) 36190765-36221944 protein_coding
ENST00000452261 (EPB41L1-004) 36092732-36182347 protein_coding
ENST00000454226 (EPB41L1-007) 36197880-36221934 protein_coding
ENST00000479336 (EPB41L1-009) 36207451-36212376 processed_transcript
ENSG00000149646 (CNBD2)
cyclic nucleotide binding domain containing 2 		ENST00000349339 (CNBD2-003) 35968607-36030700 protein_coding
ENST00000373973 (CNBD2-001) 35968590-36030700 protein_coding
ENST00000463258 (CNBD2-006) 35968623-36030669 nonsense_mediated_decay
ENST00000489667 (CNBD2-002) 35968611-35974956 protein_coding
ENST00000538900 (CNBD2-005) 35968623-36030669 protein_coding
ENST00000614708 (CNBD2-008) 35954707-35955368 protein_coding
ENST00000622112 (CNBD2-007) 35954564-35980581 protein_coding
ENSG00000171222 (SCAND1)
SCAN domain containing 1 		ENST00000305978 (SCAND1-002) 35953617-35954626 protein_coding
ENST00000373991 (SCAND1-001) 35953629-35959472 protein_coding
ENST00000615116 (SCAND1-201) 35953617-35955359 protein_coding
ENSG00000231470 (HMGB3P2)
high mobility group box 3 pseudogene 2 		ENST00000411913 (HMGB3P2-001) 36076018-36076601 processed_pseudogene
ENSG00000232406 (RP11-234K24.3)
 ENST00000441208 (RP11-234K24.3-001) 36150413-36155733 antisense
ENST00000609884 (RP11-234K24.3-002) 36148726-36155760 antisense
ENSG00000234139 (RP4-550H1.4)
 ENST00000430679 (RP4-550H1.4-002) 36072441-36074909 lincRNA
ENST00000450129 (RP4-550H1.4-001) 36072678-36085260 lincRNA
ENSG00000237063 (RP4-550H1.5)
 ENST00000433587 (RP4-550H1.5-001) 36086252-36088192 lincRNA
ENSG00000260032 (LINC00657)
long intergenic non-protein coding RNA 657 		ENST00000565493 (LINC00657-001) 36045622-36050960 lincRNA
ENSG00000277235 (RP4-550H1.7)
 ENST00000619647 (RP4-550H1.7-001) 36064243-36064563 lincRNA
CIL_00056R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038085-ENSMUSG00000027624 CGP 10090 2:156312299-156543214
GeneTranscriptPositionBiotype
ENSMUSG00000027624 (Epb4.1l1)
erythrocyte protein band 4.1-like 1 		ENSMUST00000029155 (Epb4.1l1-201) 156475837-156543214 protein_coding
ENSMUST00000103135 (Epb4.1l1-007) 156475883-156543214 protein_coding
ENSMUST00000103136 (Epb4.1l1-005) 156421101-156543214 protein_coding
ENSMUST00000103137 (Epb4.1l1-001) 156420909-156543214 protein_coding
ENSMUST00000109572 (Epb4.1l1-008) 156493903-156543214 protein_coding
ENSMUST00000109574 (Epb4.1l1-002) 156421048-156543214 protein_coding
ENSMUST00000109577 (Epb4.1l1-006) 156421112-156543214 protein_coding
ENSMUST00000125153 (Epb4.1l1-003) 156421084-156522764 protein_coding
ENSMUST00000129999 (Epb4.1l1-012) 156537357-156540326 processed_transcript
ENSMUST00000137067 (Epb4.1l1-011) 156533507-156539986 retained_intron
ENSMUST00000141109 (Epb4.1l1-009) 156475550-156499674 processed_transcript
ENSMUST00000142048 (Epb4.1l1-004) 156421052-156502428 processed_transcript
ENSMUST00000144013 (Epb4.1l1-010) 156506394-156514158 processed_transcript
ENSMUSG00000038085 (Cnbd2)
cyclic nucleotide binding domain containing 2 		ENSMUST00000037096 (Cnbd2-001) 156312299-156375635 protein_coding
ENSMUST00000073942 (Cnbd2-003) 156312592-156357102 protein_coding
ENSMUST00000109580 (Cnbd2-002) 156312633-156375638 protein_coding
ENSMUST00000125395 (Cnbd2-005) 156312578-156338665 processed_transcript
ENSMUST00000133056 (Cnbd2-004) 156312617-156320929 retained_intron
ENSMUST00000154227 (Cnbd2-006) 156333861-156339266 processed_transcript
ENSMUSG00000046229 (Scand1)
SCAN domain-containing 1 		ENSMUST00000079125 (Scand1-201) 156311847-156312704 protein_coding
ENSMUSG00000061272 (Gm14173)
predicted gene 14173 		ENSMUST00000117690 (Gm14173-001) 156410897-156411174 processed_pseudogene
ENSMUSG00000076230 (Gm22758)
predicted gene, 22758 		ENSMUST00000102275 (Gm22758-201) 156410929-156411024 miRNA
ENSMUSG00000081751 (Gm14251)
predicted gene 14251 		ENSMUST00000122133 (Gm14251-001) 156322402-156322680 processed_pseudogene
ENSMUSG00000082321 (Gm14253)
predicted gene 14253 		ENSMUST00000122112 (Gm14253-001) 156347202-156347840 processed_pseudogene
ENSMUSG00000084017 (Rpl21-ps9)
ribosomal protein L21, pseudogene 9 		ENSMUST00000119897 (Rpl21-ps9-001) 156386741-156387222 processed_pseudogene
ENSMUSG00000085524 (Gm14224)
predicted gene 14224 		ENSMUST00000147187 (Gm14224-001) 156451906-156455651 lincRNA
ENSMUSG00000085546 (Gm14252)
predicted gene 14252 		ENSMUST00000131801 (Gm14252-001) 156332317-156339381 antisense
ENSMUSG00000086872 (Gm14225)
predicted gene 14225 		ENSMUST00000142310 (Gm14225-001) 156445033-156447608 lincRNA
ENSMUSG00000087323 (Gm14170)
predicted gene 14170 		ENSMUST00000133751 (Gm14170-001) 156377925-156378968 antisense
ENSMUSG00000088637 (Gm22316)
predicted gene, 22316 		ENSMUST00000158012 (Gm22316-201) 156386107-156386322 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056R_0001ENSG00000088367ENST00000202028ENST00000338074ENST00000373941ENST00000373945ENST00000373946ENST00000373950ENST00000406771ENST00000427533ENST00000430276ENST00000432589ENST00000432603ENST00000441639ENST00000447825ENST00000451082ENST00000452261ENST00000454226ENST00000479336ENSG00000149646ENST00000349339ENST00000373973ENST00000463258ENST00000489667ENST00000538900ENST00000614708ENST00000622112ENSG00000171222ENST00000305978ENST00000373991ENST00000615116ENSG00000231470ENST00000411913ENSG00000232406ENST00000441208ENST00000609884ENSG00000234139ENST00000430679ENST00000450129ENSG00000237063ENST00000433587ENSG00000260032ENST00000565493ENSG00000277235ENST00000619647CIL_00056R_0002ENSMUSG00000027624ENSMUST00000029155ENSMUST00000103135ENSMUST00000103136ENSMUST00000103137ENSMUST00000109572ENSMUST00000109574ENSMUST00000109577ENSMUST00000125153ENSMUST00000129999ENSMUST00000137067ENSMUST00000141109ENSMUST00000142048ENSMUST00000144013ENSMUSG00000038085ENSMUST00000037096ENSMUST00000073942ENSMUST00000109580ENSMUST00000125395ENSMUST00000133056ENSMUST00000154227ENSMUSG00000046229ENSMUST00000079125ENSMUSG00000061272ENSMUST00000117690ENSMUSG00000076230ENSMUST00000102275ENSMUSG00000081751ENSMUST00000122133ENSMUSG00000082321ENSMUST00000122112ENSMUSG00000084017ENSMUST00000119897ENSMUSG00000085524ENSMUST00000147187ENSMUSG00000085546ENSMUST00000131801ENSMUSG00000086872ENSMUST00000142310ENSMUSG00000087323ENSMUST00000133751ENSMUSG00000088637ENSMUST00000158012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056R_0001ENSG00000088367ENST00000202028ENST00000338074ENST00000373941ENST00000373950ENST00000432603ENST00000441639ENST00000451082ENST00000454226ENSG00000149646ENST00000349339ENST00000373973ENST00000463258ENST00000489667ENST00000614708ENSG00000171222ENST00000305978ENST00000373991ENSG00000231470ENST00000411913ENSG00000232406ENST00000441208ENSG00000234139ENST00000430679ENST00000450129ENSG00000237063ENST00000433587ENSG00000260032ENST00000565493ENSG00000277235ENST00000619647CIL_00056R_0002ENSMUSG00000027624ENSMUST00000029155ENSMUST00000103135ENSMUST00000103136ENSMUST00000103137ENSMUST00000109572ENSMUST00000109574ENSMUST00000109577ENSMUST00000125153ENSMUST00000129999ENSMUST00000141109ENSMUST00000144013ENSMUSG00000038085ENSMUST00000037096ENSMUST00000073942ENSMUST00000109580ENSMUSG00000046229ENSMUST00000079125ENSMUSG00000061272ENSMUST00000117690ENSMUSG00000076230ENSMUST00000102275ENSMUSG00000081751ENSMUST00000122133ENSMUSG00000082321ENSMUST00000122112ENSMUSG00000084017ENSMUST00000119897ENSMUSG00000085524ENSMUST00000147187ENSMUSG00000085546ENSMUST00000131801ENSMUSG00000086872ENSMUST00000142310ENSMUSG00000087323ENSMUST00000133751ENSMUSG00000088637ENSMUST00000158012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088367 ENST00000202028 N/A 2.492±0.00 1.556±0.00 N/A N/A 1.561±0.00 2.706±0.00 N/A 0.985±0.64 2.754±2.19 0.894±0.75 7.278±5.65 5.396±0.77 1.730±0.00
ENST00000338074 N/A N/A N/A 12.348±2.24 N/A 0.435±0.00 0.706±0.00 N/A 0.358±0.00 1.804±0.00 N/A N/A 1.122±0.00 N/A
ENST00000373941 N/A N/A N/A N/A N/A 1.435±0.00 N/A N/A N/A 0.637±0.00 N/A N/A 2.687±0.00 N/A
ENST00000373945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373950 N/A N/A N/A N/A N/A 3.029±0.00 N/A N/A N/A 1.240±0.81 N/A 3.426±0.00 1.728±0.00 4.353±2.18
ENST00000406771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432603 N/A N/A N/A N/A N/A N/A N/A 31.625±0.00 N/A N/A N/A N/A N/A 5.096±0.00
ENST00000441639 3.332±0.00 1.384±0.00 N/A N/A 9.420±8.91 0.421±0.00 N/A 2.539±2.47 0.428±0.32 0.535±0.00 N/A 5.177±2.60 N/A 5.034±0.00
ENST00000447825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A N/A
ENST00000452261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454226 N/A N/A N/A N/A N/A N/A N/A 0.383±0.00 N/A 4.961±0.00 N/A N/A N/A N/A
ENST00000479336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149646 ENST00000349339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.212±0.00
ENST00000373973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.258±0.00
ENST00000463258 N/A N/A 0.165±0.00 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000489667 N/A N/A 0.121±0.00 N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A 0.104±0.00 N/A N/A
ENST00000538900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614708 N/A N/A N/A 2.090±0.00 0.707±0.00 1.549±0.00 0.954±0.67 N/A N/A N/A N/A 2.160±0.92 N/A N/A
ENST00000622112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171222 ENST00000305978 38.621±0.00 69.184±0.00 1.102±0.00 16.863±11.39 26.196±21.61 14.541±10.47 12.822±11.55 40.014±32.85 31.709±30.14 27.244±25.21 22.205±8.22 23.693±19.65 37.087±21.97 35.294±0.00
ENST00000373991 N/A 4.791±0.00 N/A N/A 3.576±0.00 N/A N/A N/A 0.248±0.00 N/A N/A 0.866±0.00 2.936±0.79 N/A
ENST00000615116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231470 ENST00000411913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.126±0.00
ENSG00000232406 ENST00000441208 0.060±0.00 0.110±0.00 0.896±0.00 0.474±0.00 0.453±0.20 0.211±0.13 0.046±0.00 0.089±0.00 0.224±0.21 0.186±0.11 N/A 0.154±0.08 0.043±0.01 0.188±0.06
ENST00000609884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234139 ENST00000430679 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A 1.121±0.00
ENST00000450129 N/A N/A 0.514±0.00 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.510±0.00
ENSG00000237063 ENST00000433587 0.153±0.00 0.916±0.00 N/A 0.330±0.00 0.161±0.00 N/A 0.208±0.00 0.204±0.00 N/A 0.422±0.00 0.080±0.00 0.136±0.08 N/A 0.246±0.14
ENSG00000260032 ENST00000565493 72.414±0.00 47.375±0.00 26.976±0.00 123.358±45.04 68.374±16.70 44.634±4.74 49.355±20.05 45.574±17.54 45.858±22.60 46.578±6.06 33.780±16.67 55.496±9.61 24.472±7.97 54.435±1.95
ENSG00000277235 ENST00000619647 N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A 0.826±0.00 N/A 0.270±0.11 N/A 0.924±0.49
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027624 ENSMUST00000029155 6.982±1.09 8.021±1.76 N/A 11.912±5.57 5.403±1.06 2.053±0.15 1.048±0.00 2.257±0.48 0.051±0.01 1.382±0.23 0.151±0.01 5.711±2.27 N/A 0.380±0.10
ENSMUST00000103135 N/A N/A N/A 16.784±11.79 2.747±0.00 N/A 0.443±0.09 N/A N/A N/A N/A N/A N/A 0.191±0.05
ENSMUST00000103136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00
ENSMUST00000103137 N/A N/A N/A 14.338±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.845±0.00 4.086±1.35 0.077±0.00
ENSMUST00000109574 6.276±3.56 6.352±1.06 4.556±0.66 N/A 4.975±2.13 4.756±1.95 0.429±0.18 5.637±1.04 0.620±0.39 2.233±0.55 0.344±0.07 6.789±2.60 6.289±3.17 0.309±0.06
ENSMUST00000109577 11.718±0.00 N/A 9.588±0.82 N/A 2.582±0.00 4.478±1.63 0.842±0.33 3.527±0.95 0.518±0.26 2.467±1.11 0.592±0.11 5.215±1.56 7.061±3.66 0.646±0.22
ENSMUST00000125153 N/A N/A N/A 68.096±0.00 N/A N/A N/A N/A N/A N/A N/A 8.337±0.00 N/A N/A
ENSMUST00000129999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.121±0.00 36.568±0.00 69.396±9.15 3.464±0.00
ENSMUST00000137067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141109 N/A 10.051±2.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.742±1.86 N/A N/A
ENSMUST00000142048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144013 N/A N/A N/A N/A 25.491±3.10 N/A N/A N/A N/A N/A N/A N/A N/A 2.643±0.23
ENSMUSG00000038085 ENSMUST00000037096 N/A N/A N/A N/A N/A 17.274±0.00 1.371±0.00 N/A N/A N/A 0.622±0.21 6.700±6.16 1.185±0.53 42.558±2.58
ENSMUST00000073942 N/A N/A 4.603±0.95 N/A 0.898±0.00 N/A N/A 18.837±0.00 4.010±0.00 N/A 0.382±0.00 0.778±0.09 N/A N/A
ENSMUST00000109580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.489±0.23 N/A 19.709±0.00
ENSMUST00000125395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046229 ENSMUST00000079125 54.818±14.91 164.858±25.10 48.827±4.25 54.780±20.68 106.251±40.10 100.665±19.32 17.840±5.86 82.970±9.28 35.197±14.55 82.540±15.72 10.018±3.13 87.266±15.44 30.234±10.10 142.586±22.23
ENSMUSG00000061272 ENSMUST00000117690 1.273±0.27 N/A 0.074±0.00 0.036±0.00 N/A 0.547±0.00 0.718±0.00 0.328±0.03 0.241±0.15 1.041±0.20 0.479±0.00 1.490±0.49 0.172±0.15 0.839±0.22
ENSMUSG00000076230 ENSMUST00000102275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 85.827±0.00 N/A
ENSMUSG00000081751 ENSMUST00000122133 0.702±0.00 0.486±0.03 0.150±0.07 0.196±0.05 0.487±0.00 0.847±0.29 N/A 0.280±0.00 0.319±0.12 0.410±0.00 0.188±0.00 1.176±1.07 0.622±0.61 0.446±0.16
ENSMUSG00000082321 ENSMUST00000122112 0.183±0.09 0.371±0.00 0.121±0.00 0.149±0.08 0.261±0.11 0.450±0.31 0.212±0.07 0.155±0.03 0.097±0.08 0.169±0.00 0.087±0.04 0.363±0.36 0.155±0.13 0.840±0.53
ENSMUSG00000084017 ENSMUST00000119897 N/A N/A N/A 0.130±0.04 0.542±0.42 N/A 0.159±0.05 N/A 0.022±0.00 N/A N/A N/A 0.021±0.01 0.102±0.02
ENSMUSG00000085524 ENSMUST00000147187 0.038±0.00 0.273±0.21 0.031±0.01 0.102±0.07 N/A 0.198±0.00 N/A 0.159±0.09 0.022±0.00 0.069±0.02 N/A 0.105±0.03 0.457±0.56 0.034±0.01
ENSMUSG00000085546 ENSMUST00000131801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A
ENSMUSG00000086872 ENSMUST00000142310 0.099±0.00 0.116±0.01 N/A 0.192±0.00 0.347±0.11 0.508±0.32 0.168±0.04 0.241±0.11 0.051±0.03 0.530±0.17 N/A 0.371±0.14 0.149±0.08 0.072±0.00
ENSMUSG00000087323 ENSMUST00000133751 N/A N/A N/A 0.773±0.00 N/A N/A N/A 0.198±0.01 N/A N/A N/A 0.265±0.00 0.344±0.00 0.364±0.03
ENSMUSG00000088637 ENSMUST00000158012 N/A N/A N/A 0.839±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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