C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114859-ENSG00000163882 CGP 9606 3:184346185-184368596
GeneTranscriptPositionBiotype
ENSG00000114859 (CLCN2)
chloride channel, voltage-sensitive 2 		ENST00000265593 (CLCN2-001) 184346185-184361651 protein_coding
ENST00000344937 (CLCN2-004) 184346188-184361602 protein_coding
ENST00000430397 (CLCN2-006) 184346221-184357020 nonsense_mediated_decay
ENST00000434054 (CLCN2-003) 184346398-184361603 protein_coding
ENST00000457512 (CLCN2-002) 184346520-184361603 protein_coding
ENST00000465231 (CLCN2-009) 184357972-184358658 retained_intron
ENST00000475279 (CLCN2-007) 184355403-184357029 processed_transcript
ENST00000485667 (CLCN2-005) 184355055-184361486 retained_intron
ENST00000491162 (CLCN2-008) 184352416-184353296 retained_intron
ENSG00000175182 (FAM131A)
family with sequence similarity 131, member A 		ENST00000310585 (FAM131A-002) 184340470-184346275 protein_coding
ENST00000340957 (FAM131A-001) 184335937-184346273 protein_coding
ENST00000383847 (FAM131A-005) 184337452-184345173 protein_coding
ENST00000418281 (FAM131A-003) 184335929-184346239 protein_coding
ENST00000418768 (FAM131A-007) 184337177-184344819 protein_coding
ENST00000433578 (FAM131A-009) 184335945-184342860 protein_coding
ENST00000450976 (FAM131A-006) 184335926-184345033 protein_coding
ENST00000453072 (FAM131A-008) 184338829-184344986 protein_coding
ENST00000487702 (FAM131A-010) 184342122-184343139 processed_transcript
ENST00000497070 (FAM131A-004) 184337565-184341460 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00056X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022843-ENSMUSG00000021018 CGP 10090 16:20702964-20722267
GeneTranscriptPositionBiotype
ENSMUSG00000021018 (Polr2h)
polymerase (RNA) II (DNA directed) polypeptide H 		ENSMUST00000021405 (Polr2h-001) 20717665-20722267 protein_coding
ENSMUST00000161038 (Polr2h-002) 20718172-20722007 processed_transcript
ENSMUSG00000022843 (Clcn2)
chloride channel 2 		ENSMUST00000007207 (Clcn2-001) 20702964-20716117 protein_coding
ENSMUST00000120099 (Clcn2-005) 20703223-20716111 protein_coding
ENSMUST00000123417 (Clcn2-009) 20707706-20708734 retained_intron
ENSMUST00000131522 (Clcn2-002) 20705538-20717746 nonsense_mediated_decay
ENSMUST00000131833 (Clcn2-007) 20710091-20711965 retained_intron
ENSMUST00000132512 (Clcn2-006) 20712311-20713668 retained_intron
ENSMUST00000144400 (Clcn2-008) 20707174-20709126 retained_intron
ENSMUST00000148131 (Clcn2-003) 20702988-20716114 retained_intron
ENSMUST00000153075 (Clcn2-004) 20702998-20716164 retained_intron
ENSMUSG00000050821 (Fam131a)
family with sequence similarity 131, member A 		ENSMUST00000056518 (Fam131a-001) 20694908-20703048 protein_coding
ENSMUST00000118919 (Fam131a-002) 20693283-20703044 protein_coding
ENSMUST00000128273 (Fam131a-003) 20696175-20701659 protein_coding
ENSMUST00000149543 (Fam131a-004) 20693282-20699283 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056X_0001ENSG00000114859ENST00000265593ENST00000344937ENST00000430397ENST00000434054ENST00000457512ENST00000465231ENST00000475279ENST00000485667ENST00000491162ENSG00000175182ENST00000310585ENST00000340957ENST00000383847ENST00000418281ENST00000418768ENST00000433578ENST00000450976ENST00000453072ENST00000487702ENST00000497070CIL_00056X_0002ENSMUSG00000021018ENSMUST00000021405ENSMUST00000161038ENSMUSG00000022843ENSMUST00000007207ENSMUST00000120099ENSMUST00000123417ENSMUST00000131522ENSMUST00000131833ENSMUST00000132512ENSMUST00000144400ENSMUST00000148131ENSMUST00000153075ENSMUSG00000050821ENSMUST00000056518ENSMUST00000118919ENSMUST00000128273ENSMUST00000149543
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056X_0001ENSG00000114859ENST00000265593ENST00000344937ENST00000430397ENST00000434054ENST00000457512ENSG00000175182ENST00000310585ENST00000340957ENST00000418281ENST00000418768ENST00000450976ENST00000453072ENST00000497070CIL_00056X_0002ENSMUSG00000021018ENSMUST00000021405ENSMUSG00000022843ENSMUST00000007207ENSMUST00000144400ENSMUST00000148131ENSMUST00000153075ENSMUSG00000050821ENSMUST00000056518ENSMUST00000118919ENSMUST00000128273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114859 ENST00000265593 N/A N/A N/A N/A N/A N/A N/A 1.697±0.00 N/A N/A N/A 2.937±1.12 1.015±0.00 N/A
ENST00000344937 N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.854±0.00
ENST00000430397 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.658±0.00 1.483±0.00 9.468±5.46
ENST00000457512 N/A 0.988±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175182 ENST00000310585 N/A N/A 0.576±0.00 4.165±0.00 0.333±0.00 N/A N/A N/A N/A 0.168±0.00 0.383±0.00 1.979±0.72 N/A N/A
ENST00000340957 2.542±0.00 N/A N/A 8.512±4.89 1.720±0.00 3.651±0.00 4.074±0.00 1.992±0.00 N/A 9.973±0.00 N/A 6.343±1.05 2.488±0.60 7.796±0.00
ENST00000383847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418281 2.220±0.00 2.657±0.00 N/A N/A 3.375±0.00 6.019±0.00 N/A 4.585±0.00 0.442±0.00 10.245±0.00 N/A 10.620±0.00 4.909±0.00 9.374±2.37
ENST00000418768 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A N/A N/A
ENST00000433578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450976 3.143±0.00 N/A N/A 20.094±0.00 N/A N/A 4.638±0.00 N/A N/A N/A 2.035±0.00 N/A N/A N/A
ENST00000453072 N/A N/A N/A N/A N/A 5.936±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497070 N/A 0.609±0.00 0.314±0.00 1.237±0.00 0.491±0.00 N/A 0.290±0.00 0.306±0.00 0.735±0.49 0.104±0.00 N/A 0.765±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021018 ENSMUST00000021405 12.537±4.95 N/A 20.804±0.01 26.738±2.54 11.292±0.65 N/A N/A 11.846±0.94 27.415±9.32 8.207±0.38 N/A 30.928±4.07 32.448±23.41 N/A
ENSMUST00000161038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022843 ENSMUST00000007207 2.335±1.44 56.273±4.66 N/A 11.321±0.91 2.093±0.15 72.776±7.27 2.077±0.00 6.489±1.16 12.504±7.74 1.635±0.19 N/A 8.967±3.45 2.902±0.88 8.741±0.70
ENSMUST00000120099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144400 N/A N/A N/A N/A 7.755±0.00 N/A N/A N/A N/A N/A N/A 19.582±2.89 N/A N/A
ENSMUST00000148131 2.678±0.00 N/A N/A 4.210±0.00 N/A N/A N/A N/A N/A N/A N/A 5.933±1.50 N/A N/A
ENSMUST00000153075 5.017±3.07 32.112±6.39 3.372±0.16 9.027±0.28 2.978±0.94 36.666±8.32 N/A 3.193±1.42 5.291±1.44 1.529±0.24 N/A 12.612±4.62 2.533±0.92 15.521±1.18
ENSMUSG00000050821 ENSMUST00000056518 3.795±2.00 N/A 7.382±0.00 19.172±12.30 2.070±0.63 N/A 8.847±0.66 N/A N/A N/A 24.709±5.91 N/A 2.854±0.91 16.948±1.75
ENSMUST00000118919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.870±0.00 N/A
ENSMUST00000128273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.191±7.60
ENSMUST00000149543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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