C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000576_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015399-ENSDARG00000062042 CGP 7955 18:30791440-30893894
GeneTranscriptPositionBiotype
ENSDARG00000015399 (foxf1)
forkhead box F1
ENSDART00000012374 (foxf1-001) 30791440-30794568 protein_coding
ENSDARG00000062042 (mthfsd)
methenyltetrahydrofolate synthetase domain containing
ENSDART00000099326 (mthfsd-201) 30822490-30893894 protein_coding
ENSDART00000139398 (mthfsd-002) 30859634-30877961 protein_coding
ENSDART00000146041 (mthfsd-001) 30822506-30877992 protein_coding
ENSDARG00000094938 (si:dkey-199i24.3)
si:dkey-199i24.3
ENSDART00000143297 (si:dkey-199i24.3-001) 30798711-30799750 processed_transcript
CIL_000576_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103241-ENSG00000103248 CGP 9606 16:86510527-86555235
GeneTranscriptPositionBiotype
ENSG00000103241 (FOXF1)
forkhead box F1
ENST00000262426 (FOXF1-001) 86510527-86515418 protein_coding
ENSG00000103248 (MTHFSD)
methenyltetrahydrofolate synthetase domain containing
ENST00000360900 (MTHFSD-001) 86530176-86555210 protein_coding
ENST00000381214 (MTHFSD-003) 86531972-86555203 protein_coding
ENST00000543303 (MTHFSD-002) 86531972-86555203 protein_coding
ENST00000546093 (MTHFSD-004) 86530833-86555235 protein_coding
ENST00000561522 (MTHFSD-010) 86542117-86555235 protein_coding
ENST00000561848 (MTHFSD-016) 86552038-86553721 processed_transcript
ENST00000561989 (MTHFSD-012) 86548067-86555169 protein_coding
ENST00000562096 (MTHFSD-019) 86532362-86542545 retained_intron
ENST00000562940 (MTHFSD-005) 86540720-86554749 protein_coding
ENST00000562994 (MTHFSD-009) 86542112-86555235 protein_coding
ENST00000564364 (MTHFSD-014) 86546605-86555154 protein_coding
ENST00000565482 (MTHFSD-015) 86548488-86555021 protein_coding
ENST00000566050 (MTHFSD-007) 86531972-86555203 nonsense_mediated_decay
ENST00000566469 (MTHFSD-018) 86541535-86554748 protein_coding
ENST00000567539 (MTHFSD-013) 86532336-86555235 nonsense_mediated_decay
ENST00000568037 (MTHFSD-017) 86547146-86555178 protein_coding
ENST00000568798 (MTHFSD-008) 86542110-86555235 nonsense_mediated_decay
ENST00000569000 (MTHFSD-011) 86541739-86555235 protein_coding
ENST00000625049 (MTHFSD-006) 86530178-86533800 TEC
ENSG00000243697 (RP11-463O9.1)
ENST00000473913 (RP11-463O9.1-001) 86525457-86526252 processed_pseudogene
ENSG00000270020 (RP11-463O9.9)
ENST00000602739 (RP11-463O9.9-001) 86520383-86523897 lincRNA
CIL_000576_0003 (Click to Hide/Show)
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Source ID Type Tax ID Position
ENSMUSG00000042812-ENSMUSG00000031816 CGP 10090 8:121084386-121108392
GeneTranscriptPositionBiotype

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000576_0001ENSDARG00000015399ENSDART00000012374ENSDARG00000062042ENSDART00000099326ENSDART00000139398ENSDART00000146041ENSDARG00000094938ENSDART00000143297CIL_000576_0002ENSG00000103241ENST00000262426ENSG00000103248ENST00000360900ENST00000381214ENST00000543303ENST00000546093ENST00000561522ENST00000561848ENST00000561989ENST00000562096ENST00000562940ENST00000562994ENST00000564364ENST00000565482ENST00000566050ENST00000566469ENST00000567539ENST00000568037ENST00000568798ENST00000569000ENST00000625049ENSG00000243697ENST00000473913ENSG00000270020ENST00000602739
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000576_0001ENSDARG00000015399ENSDART00000012374ENSDARG00000062042ENSDART00000099326ENSDART00000146041ENSDARG00000094938ENSDART00000143297CIL_000576_0002ENSG00000103241ENST00000262426ENSG00000103248ENST00000360900ENST00000543303ENST00000546093ENST00000561522ENST00000561989ENST00000562096ENST00000562940ENST00000566469ENST00000568037ENST00000568798ENST00000569000ENST00000625049ENSG00000243697ENST00000473913ENSG00000270020ENST00000602739
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015399 ENSDART00000012374 N/A N/A N/A 0.045±0.00 N/A N/A 0.150±0.05 0.644±0.00 0.064±0.00 N/A 0.096±0.00 N/A N/A N/A
ENSDARG00000062042 ENSDART00000099326 N/A N/A N/A 1.909±1.28 N/A N/A 0.121±0.04 1.044±0.83 0.386±0.00 N/A 0.314±0.00 N/A N/A N/A
ENSDART00000139398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146041 N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094938 ENSDART00000143297 N/A N/A N/A N/A N/A N/A 0.295±0.00 0.238±0.11 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103241 ENST00000262426 0.515±0.00 2.361±0.00 0.113±0.00 0.498±0.00 1.818±1.68 8.486±4.69 0.038±0.00 0.291±0.08 3.628±3.36 15.437±9.52 0.113±0.00 1.006±0.55 8.913±0.27 0.605±0.23
ENSG00000103248 ENST00000360900 N/A N/A N/A 0.961±0.00 0.554±0.00 0.863±0.00 0.935±0.00 0.628±0.00 0.682±0.23 N/A 0.674±0.28 2.164±1.43 N/A 8.425±0.00
ENST00000381214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543303 N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000546093 0.509±0.00 N/A N/A N/A 0.856±0.00 0.586±0.36 0.331±0.00 0.957±0.00 0.740±0.00 1.557±0.00 N/A 1.744±0.00 N/A 3.533±1.18
ENST00000561522 N/A N/A N/A 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.00 N/A N/A N/A
ENST00000562096 N/A N/A N/A N/A 1.033±0.00 N/A N/A 2.075±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A
ENST00000562994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566469 N/A N/A 1.237±0.00 0.412±0.00 N/A N/A 0.394±0.00 N/A N/A N/A 0.313±0.00 1.328±0.00 N/A N/A
ENST00000567539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568037 N/A N/A N/A N/A N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568798 N/A N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569000 N/A N/A N/A N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A N/A N/A N/A
ENST00000625049 N/A 0.858±0.00 0.319±0.00 N/A 0.384±0.00 0.193±0.00 N/A N/A N/A N/A N/A 1.083±0.00 N/A N/A
ENSG00000243697 ENST00000473913 0.070±0.00 0.249±0.00 N/A 0.140±0.00 0.129±0.08 0.024±0.00 0.047±0.00 0.103±0.00 0.023±0.00 N/A 0.111±0.00 0.045±0.01 N/A 0.265±0.03
ENSG00000270020 ENST00000602739 0.024±0.00 0.081±0.00 N/A 0.042±0.03 0.027±0.02 0.071±0.00 0.017±0.01 0.145±0.00 0.021±0.01 0.049±0.03 0.093±0.00 0.325±0.22 0.084±0.07 0.451±0.31

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