C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00057W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056559-ENSDARG00000071601 CGP 7955 12:18724773-18766066
GeneTranscriptPositionBiotype
ENSDARG00000056559 (ccz1)
CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) 		ENSDART00000079065 (ccz1-001) 18724773-18753953 protein_coding
ENSDARG00000071601 (pvalb9)
parvalbumin 9 		ENSDART00000105974 (pvalb9-001) 18763656-18766066 protein_coding
ENSDART00000147282 (pvalb9-002) 18764681-18765861 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_00057W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029617-ENSMUSG00000029618 CGP 10090 5:143987916-144026670
GeneTranscriptPositionBiotype
ENSMUSG00000029617 (Ccz1)
CCZ1 vacuolar protein trafficking and biogenesis associated 		ENSMUST00000031621 (Ccz1-201) 143987916-144014853 protein_coding
ENSMUSG00000029618 (Ocm)
oncomodulin 		ENSMUST00000031622 (Ocm-001) 144019804-144026599 protein_coding
ENSMUST00000085704 (Ocm-201) 144020076-144025706 protein_coding
ENSMUST00000110702 (Ocm-002) 144024440-144026670 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057W_0001ENSDARG00000056559ENSDART00000079065ENSDARG00000071601ENSDART00000105974ENSDART00000147282CIL_00057W_0002ENSMUSG00000029617ENSMUST00000031621ENSMUSG00000029618ENSMUST00000031622ENSMUST00000085704ENSMUST00000110702
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057W_0001ENSDARG00000056559ENSDART00000079065ENSDARG00000071601ENSDART00000105974ENSDART00000147282CIL_00057W_0002ENSMUSG00000029617ENSMUST00000031621ENSMUSG00000029618ENSMUST00000031622ENSMUST00000085704ENSMUST00000110702
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056559 ENSDART00000079065 N/A N/A N/A 5.057±2.24 N/A N/A 6.824±1.29 10.475±1.82 1.128±0.00 N/A 1.916±0.00 N/A N/A N/A
ENSDARG00000071601 ENSDART00000105974 N/A N/A N/A 0.630±0.32 N/A N/A 0.290±0.00 62.413±36.56 0.153±0.00 N/A 2.575±0.00 N/A N/A N/A
ENSDART00000147282 N/A N/A N/A N/A N/A N/A N/A 2.261±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029617 ENSMUST00000031621 8.053±2.19 5.509±5.18 14.805±1.41 18.137±3.74 4.206±2.66 3.426±1.29 4.404±1.54 5.701±2.17 10.391±6.89 5.808±1.69 16.924±0.79 8.531±10.83 27.652±6.29 16.920±8.03
ENSMUSG00000029618 ENSMUST00000031622 N/A N/A 0.015±0.00 0.095±0.08 N/A N/A N/A N/A 0.024±0.01 N/A N/A 0.468±0.12 0.154±0.07 0.296±0.31
ENSMUST00000085704 N/A N/A N/A 1.773±0.00 N/A N/A N/A N/A N/A N/A N/A 0.812±0.24 0.763±0.84 2.803±0.00
ENSMUST00000110702 0.320±0.00 N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00

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