C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00058S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214814-ENSG00000164983 CGP 9606 8:123851987-124372692
GeneTranscriptPositionBiotype
ENSG00000164983 (TMEM65)
transmembrane protein 65 		ENST00000297632 (TMEM65-001) 124311990-124372692 protein_coding
ENSG00000181171 (FER1L6-AS1)
FER1L6 antisense RNA 1 		ENST00000518567 (FER1L6-AS1-001) 123984138-124040782 antisense
ENSG00000214803 (RP11-37N22.1)
 ENST00000523703 (RP11-37N22.1-001) 124192671-124247398 lincRNA
ENSG00000214814 (FER1L6)
fer-1-like family member 6 		ENST00000399018 (FER1L6-201) 123955985-124120061 protein_coding
ENST00000522917 (FER1L6-001) 123851987-124120061 protein_coding
ENSG00000237586 (RP11-383J24.2)
 ENST00000517740 (RP11-383J24.2-001) 124301315-124301804 processed_pseudogene
ENSG00000250727 (RP11-959I15.1)
 ENST00000507871 (RP11-959I15.1-001) 124141888-124143512 processed_pseudogene
ENSG00000253227 (RP11-383J24.1)
 ENST00000517482 (RP11-383J24.1-001) 124271683-124277584 lincRNA
ENSG00000253868 (FER1L6-AS2)
FER1L6 antisense RNA 2 		ENST00000520031 (FER1L6-AS2-001) 124046073-124171522 antisense
ENSG00000253885 (ARF1P3)
ADP-ribosylation factor 1 pseudogene 3 		ENST00000520038 (ARF1P3-001) 124151923-124152433 processed_pseudogene
ENSG00000254000 (RP11-245A18.1)
 ENST00000522087 (RP11-245A18.1-001) 123924759-123925933 lincRNA
ENSG00000254249 (RP11-959I15.4)
 ENST00000522005 (RP11-959I15.4-001) 124036010-124040468 antisense
ENSG00000271975 (RP11-383J24.6)
 ENST00000607837 (RP11-383J24.6-001) 124306189-124308376 lincRNA
CIL_00058S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037106-ENSMUSG00000062373 CGP 10090 15:58510048-58823530
GeneTranscriptPositionBiotype
ENSMUSG00000037106 (Fer1l6)
fer-1-like 6 (C. elegans) 		ENSMUST00000159177 (Fer1l6-002) 58648505-58665092 retained_intron
ENSMUST00000159705 (Fer1l6-003) 58638505-58647083 processed_transcript
ENSMUST00000161028 (Fer1l6-001) 58510048-58662933 protein_coding
ENSMUSG00000062373 (Tmem65)
transmembrane protein 65 		ENSMUST00000072113 (Tmem65-001) 58782269-58823530 protein_coding
ENSMUSG00000065049 (Gm24041)
predicted gene, 24041 		ENSMUST00000083115 (Gm24041-201) 58819323-58819478 snRNA
ENSMUSG00000084485 (Gm23789)
predicted gene, 23789 		ENSMUST00000122536 (Gm23789-201) 58565614-58565914 misc_RNA
ENSMUSG00000093677 (Gm20712)
predicted gene 20712 		ENSMUST00000176387 (Gm20712-001) 58780461-58781951 sense_overlapping

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058S_0001ENSG00000164983ENST00000297632ENSG00000181171ENST00000518567ENSG00000214803ENST00000523703ENSG00000214814ENST00000399018ENST00000522917ENSG00000237586ENST00000517740ENSG00000250727ENST00000507871ENSG00000253227ENST00000517482ENSG00000253868ENST00000520031ENSG00000253885ENST00000520038ENSG00000254000ENST00000522087ENSG00000254249ENST00000522005ENSG00000271975ENST00000607837CIL_00058S_0002ENSMUSG00000037106ENSMUST00000159177ENSMUST00000159705ENSMUST00000161028ENSMUSG00000062373ENSMUST00000072113ENSMUSG00000065049ENSMUST00000083115ENSMUSG00000084485ENSMUST00000122536ENSMUSG00000093677ENSMUST00000176387
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058S_0001ENSG00000164983ENST00000297632ENSG00000181171ENST00000518567ENSG00000214803ENST00000523703ENSG00000214814ENST00000399018ENST00000522917ENSG00000237586ENST00000517740ENSG00000250727ENST00000507871ENSG00000253227ENST00000517482ENSG00000253868ENST00000520031ENSG00000253885ENST00000520038ENSG00000254000ENST00000522087ENSG00000254249ENST00000522005ENSG00000271975ENST00000607837CIL_00058S_0002ENSMUSG00000037106ENSMUST00000159177ENSMUST00000159705ENSMUST00000161028ENSMUSG00000062373ENSMUST00000072113ENSMUSG00000065049ENSMUST00000083115ENSMUSG00000084485ENSMUST00000122536ENSMUSG00000093677ENSMUST00000176387
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164983 ENST00000297632 2.752±0.00 0.990±0.00 1.735±0.00 4.895±1.38 2.255±0.42 4.708±0.00 7.399±2.11 0.863±0.00 0.876±0.05 N/A 3.416±0.11 8.131±5.72 2.269±0.74 2.727±0.14
ENSG00000181171 ENST00000518567 N/A N/A 0.160±0.00 N/A 0.391±0.38 N/A 0.024±0.00 N/A 0.032±0.00 0.102±0.00 N/A N/A N/A 0.111±0.10
ENSG00000214803 ENST00000523703 N/A 0.134±0.00 N/A 0.278±0.08 0.088±0.01 0.128±0.00 0.068±0.00 0.122±0.00 N/A 0.088±0.00 0.090±0.00 0.016±0.00 0.078±0.00 0.204±0.04
ENSG00000214814 ENST00000399018 N/A N/A N/A 0.039±0.00 0.003±0.00 0.139±0.00 0.125±0.00 0.074±0.07 0.008±0.00 0.129±0.04 0.052±0.00 0.139±0.11 0.008±0.00 0.420±0.00
ENST00000522917 N/A N/A 0.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237586 ENST00000517740 0.070±0.00 0.228±0.00 N/A 0.388±0.19 N/A N/A 0.503±0.43 N/A N/A N/A N/A 0.590±0.34 0.218±0.00 0.073±0.00
ENSG00000250727 ENST00000507871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00
ENSG00000253227 ENST00000517482 N/A 0.099±0.00 N/A N/A 0.070±0.00 N/A 0.053±0.01 0.269±0.00 N/A N/A N/A 0.219±0.00 N/A 0.119±0.03
ENSG00000253868 ENST00000520031 N/A N/A N/A 0.186±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.656±0.44
ENSG00000253885 ENST00000520038 N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENSG00000254000 ENST00000522087 N/A N/A 0.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.02
ENSG00000254249 ENST00000522005 N/A N/A N/A N/A 1.850±0.00 1.914±0.00 N/A N/A N/A N/A N/A N/A N/A 0.174±0.00
ENSG00000271975 ENST00000607837 0.781±0.00 2.092±0.00 0.234±0.00 1.350±0.20 1.780±0.11 0.594±0.09 5.420±0.00 1.060±0.88 0.625±0.32 1.267±0.21 2.591±1.93 3.472±1.61 0.699±0.24 0.854±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037106 ENSMUST00000159177 0.150±0.09 0.215±0.07 0.019±0.00 0.018±0.00 0.246±0.21 13.093±0.76 0.058±0.01 0.131±0.05 0.062±0.07 0.159±0.04 0.130±0.00 0.119±0.10 0.016±0.00 N/A
ENSMUST00000159705 N/A 0.212±0.00 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A 1.820±0.00
ENSMUST00000161028 0.055±0.03 0.022±0.01 N/A 0.010±0.01 N/A 7.808±3.81 0.017±0.00 0.035±0.01 0.020±0.01 0.074±0.03 N/A 0.066±0.03 0.064±0.03 0.170±0.06
ENSMUSG00000062373 ENSMUST00000072113 11.481±1.18 19.634±5.88 6.301±0.62 13.244±3.71 12.648±3.16 6.791±0.79 43.335±3.82 10.138±1.30 2.700±1.56 19.513±3.58 21.164±9.48 17.075±4.26 5.605±3.26 1.757±0.66
ENSMUSG00000065049 ENSMUST00000083115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.719±0.00 N/A
ENSMUSG00000084485 ENSMUST00000122536 N/A N/A N/A N/A 0.745±0.18 0.952±0.00 N/A 0.424±0.00 N/A 0.274±0.00 N/A N/A N/A N/A
ENSMUSG00000093677 ENSMUST00000176387 0.531±0.07 0.323±0.11 0.430±0.00 0.740±0.39 0.463±0.27 0.355±0.19 1.308±0.12 N/A 0.196±0.15 0.951±0.33 1.316±0.30 0.576±0.33 0.196±0.11 0.188±0.12

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