C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000591_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165156-ENSG00000156802 CGP 9606 8:123248451-123416350
GeneTranscriptPositionBiotype
ENSG00000156802 (ATAD2)
ATPase family, AAA domain containing 2 		ENST00000287394 (ATAD2-001) 123319850-123396465 protein_coding
ENST00000517666 (ATAD2-003) 123319850-123396434 nonsense_mediated_decay
ENST00000519124 (ATAD2-005) 123320681-123396379 nonsense_mediated_decay
ENST00000521496 (ATAD2-004) 123344513-123396401 retained_intron
ENST00000521903 (ATAD2-002) 123320502-123416350 protein_coding
ENST00000530065 (ATAD2-006) 123372662-123380914 retained_intron
ENST00000534257 (ATAD2-007) 123359244-123369388 processed_transcript
ENST00000550993 (ATAD2-008) 123356100-123357621 retained_intron
ENSG00000165156 (ZHX1)
zinc fingers and homeoboxes 1 		ENST00000297857 (ZHX1-201) 123248451-123274487 protein_coding
ENST00000395571 (ZHX1-001) 123248456-123274495 protein_coding
ENST00000480132 (ZHX1-007) 123256120-123274266 processed_transcript
ENST00000517516 (ZHX1-002) 123249660-123267391 processed_transcript
ENST00000522595 (ZHX1-005) 123255535-123274484 processed_transcript
ENST00000522655 (ZHX1-003) 123250130-123275541 protein_coding
ENST00000524267 (ZHX1-006) 123255920-123273997 processed_transcript
ENST00000602651 (ZHX1-004) 123252429-123253442 protein_coding
ENSG00000207704 (MIR548AA1)
microRNA 548aa-1 		ENST00000384971 (MIR548AA1-201) 123348034-123348130 miRNA
ENSG00000222607 (RNU6-628P)
RNA, U6 small nuclear 628, pseudogene 		ENST00000410675 (RNU6-628P-201) 123262843-123262949 snRNA
ENSG00000252297 (RNU6-875P)
RNA, U6 small nuclear 875, pseudogene 		ENST00000516488 (RNU6-875P-201) 123342414-123342519 snRNA
ENSG00000253336 (RP11-468O2.1)
 ENST00000523778 (RP11-468O2.1-001) 123288355-123290503 processed_pseudogene
ENSG00000254388 (DUTP2)
deoxyuridine triphosphatase pseudogene 2 		ENST00000519164 (DUTP2-001) 123352181-123352643 processed_pseudogene
CIL_000591_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022361-ENSMUSG00000022360 CGP 10090 15:58047003-58135082
GeneTranscriptPositionBiotype
ENSMUSG00000022360 (Atad2)
ATPase family, AAA domain containing 2 		ENSMUST00000038194 (Atad2-201) 58094047-58135082 protein_coding
ENSMUSG00000022361 (Zhx1)
zinc fingers and homeoboxes 1 		ENSMUST00000070143 (Zhx1-001) 58047305-58076469 protein_coding
ENSMUST00000110168 (Zhx1-201) 58047003-58076489 protein_coding
ENSMUST00000175805 (Zhx1-006) 58047003-58076245 protein_coding
ENSMUST00000176270 (Zhx1-007) 58054914-58076363 retained_intron
ENSMUST00000176713 (Zhx1-005) 58068660-58076541 retained_intron
ENSMUST00000177276 (Zhx1-002) 58052980-58076214 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000591_0001ENSG00000156802ENST00000287394ENST00000517666ENST00000519124ENST00000521496ENST00000521903ENST00000530065ENST00000534257ENST00000550993ENSG00000165156ENST00000297857ENST00000395571ENST00000480132ENST00000517516ENST00000522595ENST00000522655ENST00000524267ENST00000602651ENSG00000207704ENST00000384971ENSG00000222607ENST00000410675ENSG00000252297ENST00000516488ENSG00000253336ENST00000523778ENSG00000254388ENST00000519164CIL_000591_0002ENSMUSG00000022360ENSMUST00000038194ENSMUSG00000022361ENSMUST00000070143ENSMUST00000110168ENSMUST00000175805ENSMUST00000176270ENSMUST00000176713ENSMUST00000177276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000591_0001ENSG00000156802ENST00000287394ENST00000517666ENST00000519124ENST00000521496ENST00000521903ENSG00000165156ENST00000297857ENST00000395571ENST00000522655ENSG00000207704ENST00000384971ENSG00000222607ENST00000410675ENSG00000252297ENST00000516488ENSG00000253336ENST00000523778ENSG00000254388ENST00000519164CIL_000591_0002ENSMUSG00000022360ENSMUST00000038194ENSMUSG00000022361ENSMUST00000070143ENSMUST00000110168ENSMUST00000175805ENSMUST00000177276
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156802 ENST00000287394 0.678±0.00 0.250±0.00 N/A 0.505±0.00 1.624±0.00 0.924±0.11 0.765±0.59 0.423±0.10 0.327±0.08 0.795±0.00 0.147±0.00 5.902±5.55 1.670±1.71 7.103±0.00
ENST00000517666 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A N/A
ENST00000519124 N/A 0.608±0.00 0.242±0.00 0.277±0.00 0.439±0.00 0.452±0.19 2.708±0.00 N/A 0.511±0.00 0.323±0.00 0.127±0.00 0.855±0.53 N/A 2.499±0.00
ENST00000521496 N/A N/A 0.623±0.00 0.383±0.00 N/A 0.936±0.00 0.360±0.00 N/A 0.201±0.00 1.491±0.00 N/A 2.586±0.00 N/A N/A
ENST00000521903 N/A N/A N/A 0.291±0.05 0.281±0.03 N/A 1.074±0.00 0.496±0.08 0.510±0.00 0.537±0.00 N/A N/A N/A 3.163±1.27
ENST00000530065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165156 ENST00000297857 3.420±0.00 N/A N/A N/A 4.506±0.00 1.485±0.00 1.017±0.50 1.129±0.00 2.215±0.70 4.629±0.00 1.531±0.00 2.532±0.28 1.303±0.41 4.202±2.99
ENST00000395571 4.660±0.00 3.021±0.00 1.297±0.00 3.874±0.00 6.173±2.86 3.048±0.00 0.855±0.26 9.902±0.00 1.395±0.19 1.453±0.00 N/A 2.713±0.86 1.460±0.55 1.920±0.00
ENST00000480132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522655 N/A N/A 2.026±0.00 7.903±0.00 N/A 2.483±0.06 1.886±0.95 2.845±0.00 N/A N/A 1.734±0.36 1.536±0.09 N/A 4.052±0.00
ENST00000524267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207704 ENST00000384971 N/A N/A N/A N/A N/A N/A 0.292±0.00 N/A 0.446±0.00 N/A N/A N/A N/A N/A
ENSG00000222607 ENST00000410675 N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A
ENSG00000252297 ENST00000516488 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.621±0.00 N/A N/A N/A N/A
ENSG00000253336 ENST00000523778 N/A N/A N/A 0.114±0.03 0.005±0.00 N/A 0.005±0.00 0.020±0.00 N/A 0.068±0.04 0.040±0.00 0.066±0.04 0.021±0.00 0.100±0.05
ENSG00000254388 ENST00000519164 N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A 0.102±0.02 N/A 0.050±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022360 ENSMUST00000038194 0.986±0.66 1.549±1.02 1.472±0.16 1.617±0.95 1.605±1.16 1.669±0.64 0.233±0.08 0.363±0.07 5.368±6.02 0.949±0.25 0.159±0.09 2.167±1.38 6.232±3.47 1.816±1.09
ENSMUSG00000022361 ENSMUST00000070143 8.158±0.42 4.644±0.37 9.212±0.41 9.056±3.28 7.100±1.76 2.823±0.48 2.533±0.17 6.492±0.43 4.159±0.97 6.821±0.64 4.787±0.58 6.318±4.09 3.550±1.80 5.728±0.75
ENSMUST00000110168 N/A 7.145±0.28 1.769±0.01 1.986±0.11 N/A 1.834±0.00 N/A 1.394±0.19 1.155±0.14 1.721±0.11 0.996±0.00 4.020±0.00 0.939±0.00 N/A
ENSMUST00000175805 N/A 6.288±0.00 N/A N/A N/A N/A N/A N/A 1.930±0.39 N/A N/A 2.787±0.44 N/A N/A
ENSMUST00000176270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177276 N/A N/A N/A N/A N/A N/A 1.432±0.27 N/A N/A N/A N/A N/A N/A 3.722±0.55

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