C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148482-ENSG00000165995 CGP 9606 10:17951839-18541869
GeneTranscriptPositionBiotype
ENSG00000148482 (SLC39A12)
solute carrier family 39 (zinc transporter), member 12 		ENST00000377369 (SLC39A12-201) 17951839-18043292 protein_coding
ENST00000377371 (SLC39A12-001) 17951914-18043287 protein_coding
ENST00000377374 (SLC39A12-002) 17951892-18043287 protein_coding
ENST00000539911 (SLC39A12-202) 17951839-18043292 protein_coding
ENSG00000165995 (CACNB2)
calcium channel, voltage-dependent, beta 2 subunit 		ENST00000282343 (CACNB2-002) 18140958-18541127 protein_coding
ENST00000324631 (CACNB2-001) 18140677-18541127 protein_coding
ENST00000352115 (CACNB2-008) 18140737-18539724 protein_coding
ENST00000377315 (CACNB2-004) 18400813-18541127 protein_coding
ENST00000377319 (CACNB2-005) 18261261-18541127 protein_coding
ENST00000377328 (CACNB2-009) 18140737-18539724 protein_coding
ENST00000377329 (CACNB2-007) 18340737-18541109 protein_coding
ENST00000377331 (CACNB2-010) 18141180-18539724 protein_coding
ENST00000396576 (CACNB2-003) 18260769-18541869 protein_coding
ENST00000467034 (CACNB2-012) 18140792-18182107 processed_transcript
ENST00000468177 (CACNB2-011) 18140747-18151269 retained_intron
ENST00000498816 (CACNB2-006) 18340717-18498793 retained_intron
ENST00000612134 (CACNB2-201) 18340927-18541862 protein_coding
ENST00000612743 (CACNB2-202) 18340922-18539730 protein_coding
ENST00000615785 (CACNB2-203) 18260769-18541862 protein_coding
ENST00000617363 (CACNB2-204) 18260769-18541862 protein_coding
ENSG00000225527 (RP11-383B4.4)
 ENST00000433526 (RP11-383B4.4-001) 18531849-18533336 antisense
ENSG00000226083 (SLC39A12-AS1)
SLC39A12 antisense RNA 1 		ENST00000439319 (SLC39A12-AS1-001) 18001786-18010562 antisense
ENST00000445287 (SLC39A12-AS1-002) 18003104-18007270 antisense
ENSG00000240291 (RP11-499P20.2)
 ENST00000425669 (RP11-499P20.2-001) 18513115-18545651 antisense
ENST00000436485 (RP11-499P20.2-002) 18541586-18544387 antisense
CIL_0005AA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036949-ENSMUSG00000057914 CGP 10090 2:14388316-14987908
GeneTranscriptPositionBiotype
ENSMUSG00000036949 (Slc39a12)
solute carrier family 39 (zinc transporter), member 12 		ENSMUST00000082290 (Slc39a12-002) 14388399-14494977 protein_coding
ENSMUST00000114731 (Slc39a12-001) 14388316-14494975 protein_coding
ENSMUST00000133258 (Slc39a12-003) 14388512-14389539 protein_coding
ENSMUSG00000057914 (Cacnb2)
calcium channel, voltage-dependent, beta 2 subunit 		ENSMUST00000114718 (Cacnb2-006) 14873656-14971646 protein_coding
ENSMUST00000114719 (Cacnb2-007) 14873820-14986149 protein_coding
ENSMUST00000114723 (Cacnb2-004) 14604306-14987908 protein_coding
ENSMUST00000123719 (Cacnb2-003) 14873993-14963667 processed_transcript
ENSMUST00000137746 (Cacnb2-005) 14763129-14961691 processed_transcript
ENSMUST00000144423 (Cacnb2-008) 14982113-14984414 processed_transcript
ENSMUST00000148676 (Cacnb2-001) 14605116-14962799 processed_transcript
ENSMUST00000156027 (Cacnb2-002) 14605116-14961042 protein_coding
ENSMUSG00000070271 (Gm13268)
predicted gene 13268 		ENSMUST00000117485 (Gm13268-001) 14626893-14627323 processed_pseudogene
ENSMUSG00000075525 (Gm10849)
predicted gene 10849 		ENSMUST00000100397 (Gm10849-201) 14603990-14604611 pseudogene
ENSMUSG00000081008 (Gm13314)
predicted gene 13314 		ENSMUST00000118742 (Gm13314-001) 14691381-14691699 processed_pseudogene
ENSMUSG00000082542 (Gm13311)
predicted gene 13311 		ENSMUST00000117863 (Gm13311-001) 14692872-14693251 processed_pseudogene
ENSMUSG00000083305 (Gm13315)
predicted gene 13315 		ENSMUST00000120376 (Gm13315-001) 14721133-14722121 processed_pseudogene
ENSMUSG00000083633 (Gm13312)
predicted gene 13312 		ENSMUST00000119631 (Gm13312-001) 14672255-14672720 processed_pseudogene
ENSMUSG00000084901 (Gm13266)
predicted gene 13266 		ENSMUST00000141869 (Gm13266-001) 14512591-14542805 lincRNA
ENSMUSG00000085281 (Gm13316)
predicted gene 13316 		ENSMUST00000140537 (Gm13316-001) 14811848-14812538 processed_pseudogene
ENSMUSG00000087086 (Gm13269)
predicted gene 13269 		ENSMUST00000143458 (Gm13269-001) 14740375-14763476 antisense
ENSMUST00000147019 (Gm13269-002) 14740374-14767022 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AA_0001ENSG00000148482ENST00000377369ENST00000377371ENST00000377374ENST00000539911ENSG00000165995ENST00000282343ENST00000324631ENST00000352115ENST00000377315ENST00000377319ENST00000377328ENST00000377329ENST00000377331ENST00000396576ENST00000467034ENST00000468177ENST00000498816ENST00000612134ENST00000612743ENST00000615785ENST00000617363ENSG00000225527ENST00000433526ENSG00000226083ENST00000439319ENST00000445287ENSG00000240291ENST00000425669ENST00000436485CIL_0005AA_0002ENSMUSG00000036949ENSMUST00000082290ENSMUST00000114731ENSMUST00000133258ENSMUSG00000057914ENSMUST00000114718ENSMUST00000114719ENSMUST00000114723ENSMUST00000123719ENSMUST00000137746ENSMUST00000144423ENSMUST00000148676ENSMUST00000156027ENSMUSG00000070271ENSMUST00000117485ENSMUSG00000075525ENSMUST00000100397ENSMUSG00000081008ENSMUST00000118742ENSMUSG00000082542ENSMUST00000117863ENSMUSG00000083305ENSMUST00000120376ENSMUSG00000083633ENSMUST00000119631ENSMUSG00000084901ENSMUST00000141869ENSMUSG00000085281ENSMUST00000140537ENSMUSG00000087086ENSMUST00000143458ENSMUST00000147019
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AA_0001ENSG00000148482ENST00000377369ENST00000377371ENST00000377374ENST00000539911ENSG00000165995ENST00000282343ENST00000324631ENST00000352115ENST00000377315ENST00000377319ENST00000377329ENST00000377331ENST00000396576ENST00000612134ENST00000612743ENSG00000225527ENST00000433526ENSG00000226083ENST00000439319ENST00000445287ENSG00000240291ENST00000425669CIL_0005AA_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148482 ENST00000377369 N/A N/A N/A 3.718±0.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377371 N/A N/A N/A 6.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000377374 N/A N/A N/A 3.048±1.32 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00
ENST00000539911 0.027±0.00 N/A N/A N/A 0.029±0.00 0.015±0.00 N/A N/A N/A 0.043±0.00 0.026±0.00 N/A N/A N/A
ENSG00000165995 ENST00000282343 N/A N/A N/A N/A 0.934±0.00 N/A N/A N/A 2.726±0.00 0.774±0.00 N/A N/A N/A N/A
ENST00000324631 0.263±0.00 1.556±0.00 N/A N/A 0.427±0.00 1.776±0.00 N/A 0.442±0.00 N/A N/A N/A 2.815±0.38 N/A N/A
ENST00000352115 N/A N/A N/A N/A N/A N/A N/A N/A 3.892±0.00 N/A N/A N/A N/A N/A
ENST00000377315 N/A N/A N/A 2.709±0.57 N/A 1.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377319 N/A N/A N/A 1.945±0.36 N/A 1.068±0.00 N/A N/A N/A 0.944±0.00 0.070±0.00 N/A N/A N/A
ENST00000377328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377329 N/A N/A N/A 2.847±0.00 N/A N/A 3.771±0.23 N/A N/A 0.720±0.00 N/A N/A N/A N/A
ENST00000377331 N/A N/A N/A N/A 1.986±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396576 N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612134 N/A N/A N/A N/A N/A 1.756±0.00 N/A N/A N/A N/A N/A 1.412±0.00 0.121±0.00 1.169±0.00
ENST00000612743 N/A N/A 3.609±0.00 11.016±0.00 N/A N/A 13.582±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000615785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225527 ENST00000433526 0.091±0.00 0.233±0.00 N/A 0.452±0.25 0.226±0.00 N/A 0.228±0.00 0.173±0.00 0.051±0.00 0.574±0.45 N/A 1.308±1.20 N/A N/A
ENSG00000226083 ENST00000439319 0.011±0.00 0.138±0.00 N/A N/A 0.295±0.00 0.035±0.00 0.200±0.00 0.136±0.00 2.342±0.00 0.081±0.00 0.025±0.00 0.032±0.00 N/A 0.068±0.00
ENST00000445287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 0.109±0.02
ENSG00000240291 ENST00000425669 N/A 2.677±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036949 ENSMUST00000082290 0.053±0.05 0.046±0.00 0.064±0.01 1.969±1.84 0.017±0.00 0.057±0.02 0.008±0.00 0.029±0.02 0.041±0.01 0.150±0.07 N/A 0.160±0.07 0.042±0.04 0.128±0.02
ENSMUST00000114731 0.005±0.00 N/A N/A N/A 0.011±0.01 N/A 0.005±0.00 0.006±0.00 0.032±0.02 N/A 0.025±0.01 0.018±0.01 0.015±0.01 N/A
ENSMUST00000133258 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.03 N/A N/A 0.544±0.00 N/A N/A
ENSMUSG00000057914 ENSMUST00000114718 N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A
ENSMUST00000114719 1.586±1.26 4.588±2.23 N/A 2.758±2.47 0.077±0.00 0.812±0.11 7.381±0.86 0.286±0.09 0.083±0.08 1.538±0.56 0.027±0.00 3.126±0.96 0.290±0.04 0.201±0.08
ENSMUST00000114723 0.958±0.78 3.193±1.03 4.731±1.90 2.240±1.59 0.068±0.03 0.688±0.10 2.408±0.41 0.343±0.14 0.066±0.05 1.037±0.19 0.068±0.02 1.406±0.45 1.425±0.00 0.102±0.02
ENSMUST00000123719 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.014±0.00 N/A N/A N/A
ENSMUST00000137746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144423 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.033±0.00 N/A N/A N/A
ENSMUST00000148676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156027 N/A N/A N/A N/A 0.237±0.18 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A
ENSMUSG00000070271 ENSMUST00000117485 0.649±0.37 1.751±0.86 N/A 0.596±0.01 0.163±0.02 0.575±0.09 0.401±0.00 0.122±0.00 0.266±0.31 0.623±0.31 0.140±0.00 1.256±1.11 0.249±0.10 0.130±0.00
ENSMUSG00000075525 ENSMUST00000100397 N/A 2.968±0.96 N/A N/A 0.113±0.01 N/A N/A N/A N/A N/A N/A 1.695±0.08 N/A N/A
ENSMUSG00000081008 ENSMUST00000118742 0.688±0.06 0.812±0.35 N/A N/A N/A N/A N/A 0.290±0.10 0.041±0.00 0.541±0.00 N/A 1.574±0.79 0.067±0.00 N/A
ENSMUSG00000082542 ENSMUST00000117863 0.308±0.00 0.274±0.00 0.111±0.00 0.107±0.00 0.249±0.00 N/A 0.141±0.00 0.194±0.06 0.091±0.03 0.249±0.08 N/A 0.766±0.68 0.138±0.00 0.152±0.02
ENSMUSG00000083305 ENSMUST00000120376 0.087±0.04 0.253±0.09 0.178±0.09 0.130±0.02 N/A 0.149±0.00 0.074±0.04 0.066±0.04 0.037±0.01 0.216±0.14 0.041±0.00 0.239±0.20 0.170±0.09 N/A
ENSMUSG00000083633 ENSMUST00000119631 0.192±0.08 0.227±0.02 0.475±0.15 0.135±0.08 0.149±0.00 0.396±0.19 N/A 0.111±0.00 0.031±0.01 0.309±0.06 N/A 0.398±0.22 0.218±0.00 0.270±0.02
ENSMUSG00000084901 ENSMUST00000141869 N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000085281 ENSMUST00000140537 0.159±0.00 0.244±0.05 0.110±0.01 1.752±1.69 0.052±0.00 0.213±0.09 N/A 0.110±0.06 7.061±0.19 0.172±0.00 N/A 0.199±0.01 0.103±0.00 N/A
ENSMUSG00000087086 ENSMUST00000143458 N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A 0.777±0.19 N/A
ENSMUST00000147019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.303±0.27 N/A

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