C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144677-ENSG00000136059 CGP 9606 3:37861960-38007188
GeneTranscriptPositionBiotype
ENSG00000136059 (VILL)
villin-like 		ENST00000283713 (VILL-001) 37988059-38007188 protein_coding
ENST00000383759 (VILL-201) 37993587-38007185 protein_coding
ENST00000412008 (VILL-009) 37998318-38002545 nonsense_mediated_decay
ENST00000416303 (VILL-006) 37990726-37995789 protein_coding
ENST00000460040 (VILL-008) 37993393-37994005 retained_intron
ENST00000463080 (VILL-010) 37999232-38003313 retained_intron
ENST00000465644 (VILL-002) 37994153-38007161 protein_coding
ENST00000484717 (VILL-004) 37994153-38002480 retained_intron
ENST00000486616 (VILL-005) 38000907-38007184 retained_intron
ENST00000488209 (VILL-011) 38004064-38006204 retained_intron
ENST00000492491 (VILL-007) 37991134-37997187 protein_coding
ENSG00000144677 (CTDSPL)
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 		ENST00000273179 (CTDSPL-001) 37862174-37984469 protein_coding
ENST00000310189 (CTDSPL-005) 37954417-37981125 processed_transcript
ENST00000416688 (CTDSPL-007) 37964579-37968432 protein_coding
ENST00000435525 (CTDSPL-003) 37862178-37947171 nonsense_mediated_decay
ENST00000436654 (CTDSPL-009) 37975773-37982384 protein_coding
ENST00000443503 (CTDSPL-002) 37861960-37984469 protein_coding
ENST00000447745 (CTDSPL-008) 37964637-37984468 protein_coding
ENST00000486978 (CTDSPL-004) 37944714-37975786 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0005AN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047409-ENSMUSG00000038775 CGP 10090 9:118926453-119071525
GeneTranscriptPositionBiotype
ENSMUSG00000038775 (Vill)
villin-like 		ENSMUST00000051386 (Vill-001) 119052778-119071519 protein_coding
ENSMUST00000074734 (Vill-002) 119052802-119071326 protein_coding
ENSMUST00000126251 (Vill-005) 119063454-119071337 protein_coding
ENSMUST00000131647 (Vill-010) 119052865-119058426 protein_coding
ENSMUST00000135872 (Vill-009) 119052778-119058055 retained_intron
ENSMUST00000136561 (Vill-006) 119063458-119066817 protein_coding
ENSMUST00000141185 (Vill-004) 119063448-119071326 protein_coding
ENSMUST00000151638 (Vill-008) 119063482-119065343 processed_transcript
ENSMUST00000153454 (Vill-003) 119052778-119071525 retained_intron
ENSMUST00000153630 (Vill-007) 119063455-119070067 nonsense_mediated_decay
ENSMUSG00000047409 (Ctdspl)
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 		ENSMUST00000073109 (Ctdspl-001) 118926453-119043998 protein_coding
ENSMUST00000172464 (Ctdspl-003) 118926862-119040649 protein_coding
ENSMUST00000174132 (Ctdspl-002) 119033001-119040909 retained_intron
ENSMUST00000174841 (Ctdspl-004) 118929867-119033628 processed_transcript
ENSMUSG00000065513 (Mir26a-1)
microRNA 26a-1 		ENSMUST00000083579 (Mir26a-1-201) 119031796-119031885 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AN_0001ENSG00000136059ENST00000283713ENST00000383759ENST00000412008ENST00000416303ENST00000460040ENST00000463080ENST00000465644ENST00000484717ENST00000486616ENST00000488209ENST00000492491ENSG00000144677ENST00000273179ENST00000310189ENST00000416688ENST00000435525ENST00000436654ENST00000443503ENST00000447745ENST00000486978CIL_0005AN_0002ENSMUSG00000038775ENSMUST00000051386ENSMUST00000074734ENSMUST00000126251ENSMUST00000131647ENSMUST00000135872ENSMUST00000136561ENSMUST00000141185ENSMUST00000151638ENSMUST00000153454ENSMUST00000153630ENSMUSG00000047409ENSMUST00000073109ENSMUST00000172464ENSMUST00000174132ENSMUST00000174841ENSMUSG00000065513ENSMUST00000083579
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AN_0001ENSG00000136059ENST00000283713ENST00000383759ENST00000412008ENST00000416303ENST00000463080ENST00000465644ENST00000484717ENST00000486616ENST00000488209ENST00000492491ENSG00000144677ENST00000273179ENST00000436654ENST00000443503CIL_0005AN_0002ENSMUSG00000038775ENSMUST00000051386ENSMUST00000074734ENSMUST00000126251ENSMUST00000131647ENSMUST00000136561ENSMUST00000141185ENSMUST00000153454ENSMUST00000153630ENSMUSG00000047409ENSMUST00000073109ENSMUST00000174132ENSMUSG00000065513ENSMUST00000083579
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136059 ENST00000283713 N/A N/A N/A N/A 0.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000383759 0.605±0.00 0.928±0.00 N/A 0.938±0.00 1.116±0.00 2.922±0.00 N/A N/A N/A 2.050±0.00 N/A 2.599±2.78 1.710±0.58 1.809±0.09
ENST00000412008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.648±0.00 N/A N/A
ENST00000416303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.708±0.00 N/A N/A N/A
ENST00000460040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463080 N/A N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A N/A N/A N/A N/A
ENST00000465644 0.717±0.00 N/A 0.102±0.00 0.640±0.16 1.720±0.00 2.097±0.00 0.173±0.00 N/A 0.353±0.00 1.413±0.00 0.266±0.00 3.854±0.39 2.176±0.05 2.607±0.92
ENST00000484717 N/A N/A 0.072±0.00 0.156±0.00 0.528±0.00 N/A N/A N/A 0.801±0.00 N/A 0.125±0.00 N/A N/A N/A
ENST00000486616 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A 0.152±0.00 N/A 0.469±0.00
ENST00000488209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A
ENST00000492491 N/A N/A 0.402±0.00 1.092±0.00 0.718±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144677 ENST00000273179 4.303±0.00 2.567±0.00 N/A 1.166±0.94 4.193±2.82 6.547±0.00 4.122±0.00 9.486±0.00 N/A 4.548±0.00 0.791±0.59 4.214±1.67 8.486±2.93 4.460±2.62
ENST00000310189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436654 N/A N/A N/A N/A N/A N/A N/A 2.197±0.00 N/A N/A N/A N/A N/A N/A
ENST00000443503 N/A 1.729±0.00 N/A N/A N/A 0.948±0.00 3.784±3.04 8.370±0.00 2.497±0.00 4.004±0.00 N/A 2.403±1.08 5.864±1.63 3.185±1.98
ENST00000447745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038775 ENSMUST00000051386 3.390±0.98 0.158±0.06 6.220±0.12 0.176±0.01 5.941±2.40 2.203±0.31 0.260±0.18 7.890±3.16 0.987±0.78 2.460±0.41 0.097±0.00 3.243±1.54 2.865±1.93 1.075±0.46
ENSMUST00000074734 1.096±0.00 0.137±0.00 N/A N/A 2.777±0.00 0.740±0.05 0.086±0.03 2.830±0.83 0.144±0.02 N/A 0.045±0.00 1.519±0.19 0.585±0.00 0.845±0.28
ENSMUST00000126251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.07 N/A N/A N/A
ENSMUST00000131647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A
ENSMUST00000135872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136561 4.294±0.00 2.112±0.70 N/A 1.248±0.00 20.556±4.95 5.688±0.38 0.257±0.00 18.408±0.00 5.462±2.53 5.123±0.00 0.150±0.00 8.028±0.81 N/A N/A
ENSMUST00000141185 1.856±0.22 0.482±0.22 N/A 0.498±0.04 N/A 2.231±0.07 N/A 8.020±1.08 1.304±0.93 1.994±0.45 0.099±0.04 2.908±1.06 2.361±0.80 1.188±0.00
ENSMUST00000151638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153454 0.919±0.22 0.085±0.00 2.315±1.15 0.120±0.03 2.858±0.32 0.726±0.17 0.069±0.04 N/A 0.041±0.01 0.590±0.00 0.042±0.02 1.084±0.45 0.822±0.29 0.265±0.00
ENSMUST00000153630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.11 N/A N/A N/A
ENSMUSG00000047409 ENSMUST00000073109 13.498±13.28 6.876±2.91 8.551±3.25 4.760±0.13 7.165±3.07 9.010±5.64 1.205±0.30 4.971±2.89 1.390±1.21 13.448±8.47 0.228±0.02 4.995±2.74 15.095±6.16 0.798±0.00
ENSMUST00000172464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.752±0.54 N/A N/A
ENSMUST00000174841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065513 ENSMUST00000083579 N/A N/A N/A N/A N/A N/A N/A 6341.180±0.00 N/A N/A N/A N/A N/A N/A

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